Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Upf1Q9EPU0 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Upf1Q9EPU0 Gm23172-201ENSMUST00000157160 124 ntBASIC2.22□□□□□ -2.05
Upf1Q9EPU0 Gm24478-201ENSMUST00000157439 158 ntBASIC2.22□□□□□ -2.05
Upf1Q9EPU0 Mir1954-201ENSMUST00000175595 86 ntBASIC2.22□□□□□ -2.05
Upf1Q9EPU0 Mir7016-201ENSMUST00000184308 72 ntBASIC2.22□□□□□ -2.05
Upf1Q9EPU0 Mir6928-201ENSMUST00000185166 70 ntBASIC2.22□□□□□ -2.05
Upf1Q9EPU0 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Upf1Q9EPU0 AC117232.1-201ENSMUST00000197964 119 ntBASIC2.22□□□□□ -2.05
Upf1Q9EPU0 Gm43626-201ENSMUST00000198575 162 ntBASIC2.22□□□□□ -2.05
Upf1Q9EPU0 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.22□□□□□ -2.05
Upf1Q9EPU0 Mir221-201ENSMUST00000083488 95 ntBASIC2.22□□□□□ -2.05
Upf1Q9EPU0 AC158598.2-201ENSMUST00000213397 3832 ntBASIC2.22□□□□□ -2.05
Upf1Q9EPU0 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.21□□□□□ -2.06
Upf1Q9EPU0 Gm26076-201ENSMUST00000104065 105 ntBASIC2.21□□□□□ -2.06
Upf1Q9EPU0 Gm22796-201ENSMUST00000157234 106 ntBASIC2.21□□□□□ -2.06
Upf1Q9EPU0 Gm27446-201ENSMUST00000183963 89 ntBASIC2.21□□□□□ -2.06
Upf1Q9EPU0 Mir7657-201ENSMUST00000196051 57 ntBASIC2.21□□□□□ -2.06
Upf1Q9EPU0 Gm24624-201ENSMUST00000082617 164 ntBASIC2.21□□□□□ -2.06
Upf1Q9EPU0 Gm24154-201ENSMUST00000175261 130 ntBASIC2.2□□□□□ -2.06
Upf1Q9EPU0 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.2□□□□□ -2.06
Upf1Q9EPU0 Gm43960-201ENSMUST00000204249 5020 ntBASIC2.2□□□□□ -2.06
Upf1Q9EPU0 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.2□□□□□ -2.06
Upf1Q9EPU0 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Upf1Q9EPU0 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
Upf1Q9EPU0 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC2.19□□□□□ -2.06
Upf1Q9EPU0 Gm15289-201ENSMUST00000117793 244 ntBASIC2.19□□□□□ -2.06
Upf1Q9EPU0 Gm24246-201ENSMUST00000157315 132 ntBASIC2.19□□□□□ -2.06
Upf1Q9EPU0 Gm23329-201ENSMUST00000157415 108 ntBASIC2.19□□□□□ -2.06
Upf1Q9EPU0 Gm22708-201ENSMUST00000158987 103 ntBASIC2.19□□□□□ -2.06
Upf1Q9EPU0 Gm25949-201ENSMUST00000175333 114 ntBASIC2.19□□□□□ -2.06
Upf1Q9EPU0 Gm24661-201ENSMUST00000083205 104 ntBASIC2.19□□□□□ -2.06
Upf1Q9EPU0 Mir411-201ENSMUST00000083543 82 ntBASIC2.19□□□□□ -2.06
Upf1Q9EPU0 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Upf1Q9EPU0 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Upf1Q9EPU0 Gm25623-201ENSMUST00000157216 108 ntBASIC2.18□□□□□ -2.06
Upf1Q9EPU0 Gm23253-201ENSMUST00000157441 104 ntBASIC2.18□□□□□ -2.06
Upf1Q9EPU0 Scarna3b-201ENSMUST00000157533 139 ntBASIC2.18□□□□□ -2.06
Upf1Q9EPU0 Gm23342-201ENSMUST00000158958 115 ntBASIC2.18□□□□□ -2.06
Upf1Q9EPU0 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC2.18□□□□□ -2.06
Upf1Q9EPU0 Gm42855-201ENSMUST00000197388 253 ntBASIC2.18□□□□□ -2.06
Upf1Q9EPU0 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Upf1Q9EPU0 AC147101.2-201ENSMUST00000219756 184 ntBASIC2.18□□□□□ -2.06
Upf1Q9EPU0 Gm24410-201ENSMUST00000083433 107 ntBASIC2.18□□□□□ -2.06
Upf1Q9EPU0 AC164629.4-201ENSMUST00000218505 3247 ntBASIC2.18□□□□□ -2.06
Upf1Q9EPU0 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Upf1Q9EPU0 Mir223-201ENSMUST00000102112 110 ntBASIC2.17□□□□□ -2.06
Upf1Q9EPU0 Gm25367-201ENSMUST00000158846 106 ntBASIC2.17□□□□□ -2.06
Upf1Q9EPU0 Mir3061-201ENSMUST00000175129 91 ntBASIC2.17□□□□□ -2.06
Upf1Q9EPU0 Gm22565-201ENSMUST00000175540 69 ntBASIC2.17□□□□□ -2.06
Upf1Q9EPU0 Mir7021-201ENSMUST00000197026 63 ntBASIC2.17□□□□□ -2.06
Upf1Q9EPU0 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Upf1Q9EPU0 CT025689.3-201ENSMUST00000223817 301 ntBASIC2.17□□□□□ -2.06
Upf1Q9EPU0 Gm24148-201ENSMUST00000082762 80 ntBASIC2.17□□□□□ -2.06
Upf1Q9EPU0 Gm13231-201ENSMUST00000119218 2850 ntBASIC2.16□□□□□ -2.06
Upf1Q9EPU0 Gm24984-201ENSMUST00000104454 133 ntBASIC2.16□□□□□ -2.06
Upf1Q9EPU0 Mir654-201ENSMUST00000104787 84 ntBASIC2.16□□□□□ -2.06
Upf1Q9EPU0 Gm22451-201ENSMUST00000122803 151 ntBASIC2.16□□□□□ -2.06
Upf1Q9EPU0 Gm26280-201ENSMUST00000157096 101 ntBASIC2.16□□□□□ -2.06
Upf1Q9EPU0 Gm23434-201ENSMUST00000157179 100 ntBASIC2.16□□□□□ -2.06
Upf1Q9EPU0 Gm24916-201ENSMUST00000157287 79 ntBASIC2.16□□□□□ -2.06
Upf1Q9EPU0 Gm25423-201ENSMUST00000157609 107 ntBASIC2.16□□□□□ -2.06
Upf1Q9EPU0 Gm20409-201ENSMUST00000173457 130 ntBASIC2.16□□□□□ -2.06
Upf1Q9EPU0 Gm25241-201ENSMUST00000174909 84 ntBASIC2.16□□□□□ -2.06
Upf1Q9EPU0 Gm26217-201ENSMUST00000175212 84 ntBASIC2.16□□□□□ -2.06
Upf1Q9EPU0 Mir5104-201ENSMUST00000175319 94 ntBASIC2.16□□□□□ -2.06
Upf1Q9EPU0 Gm22929-201ENSMUST00000175517 107 ntBASIC2.16□□□□□ -2.06
Upf1Q9EPU0 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.15□□□□□ -2.07
Upf1Q9EPU0 Gm22332-201ENSMUST00000158072 126 ntBASIC2.15□□□□□ -2.07
Upf1Q9EPU0 Gm20391-201ENSMUST00000174722 106 ntBASIC2.15□□□□□ -2.07
Upf1Q9EPU0 Gm23419-201ENSMUST00000175523 84 ntBASIC2.15□□□□□ -2.07
Upf1Q9EPU0 Gm37778-201ENSMUST00000191732 190 ntBASIC2.15□□□□□ -2.07
Upf1Q9EPU0 Mir7232-201ENSMUST00000197929 74 ntBASIC2.15□□□□□ -2.07
Upf1Q9EPU0 Mir3069-201ENSMUST00000198802 65 ntBASIC2.15□□□□□ -2.07
Upf1Q9EPU0 Gm24313-201ENSMUST00000082561 133 ntBASIC2.15□□□□□ -2.07
Upf1Q9EPU0 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Upf1Q9EPU0 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2.14□□□□□ -2.07
Upf1Q9EPU0 Gm25753-201ENSMUST00000116792 121 ntBASIC2.14□□□□□ -2.07
Upf1Q9EPU0 Gm22403-201ENSMUST00000174919 84 ntBASIC2.14□□□□□ -2.07
Upf1Q9EPU0 Gm25035-201ENSMUST00000175414 77 ntBASIC2.14□□□□□ -2.07
Upf1Q9EPU0 Mir6377-201ENSMUST00000183760 114 ntBASIC2.14□□□□□ -2.07
Upf1Q9EPU0 AC139186.1-201ENSMUST00000197610 94 ntBASIC2.14□□□□□ -2.07
Upf1Q9EPU0 Gm24030-201ENSMUST00000083931 164 ntBASIC2.14□□□□□ -2.07
Upf1Q9EPU0 Gm16510-201ENSMUST00000153501 249 ntBASIC2.13□□□□□ -2.07
Upf1Q9EPU0 Gm25838-201ENSMUST00000158920 120 ntBASIC2.13□□□□□ -2.07
Upf1Q9EPU0 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.13□□□□□ -2.07
Upf1Q9EPU0 AC126939.3-201ENSMUST00000226061 166 ntBASIC2.13□□□□□ -2.07
Upf1Q9EPU0 Gm23328-201ENSMUST00000157418 132 ntBASIC2.12□□□□□ -2.07
Upf1Q9EPU0 Gm22815-201ENSMUST00000157451 62 ntBASIC2.12□□□□□ -2.07
Upf1Q9EPU0 Gm18433-201ENSMUST00000192747 197 ntBASIC2.12□□□□□ -2.07
Upf1Q9EPU0 Gm45471-201ENSMUST00000211270 281 ntBASIC2.12□□□□□ -2.07
Upf1Q9EPU0 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
Upf1Q9EPU0 Mir343-201ENSMUST00000102360 75 ntBASIC2.11□□□□□ -2.07
Upf1Q9EPU0 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Upf1Q9EPU0 Gm25611-201ENSMUST00000104017 133 ntBASIC2.11□□□□□ -2.07
Upf1Q9EPU0 Gm22558-201ENSMUST00000157326 95 ntBASIC2.11□□□□□ -2.07
Upf1Q9EPU0 Gm24880-201ENSMUST00000158776 85 ntBASIC2.11□□□□□ -2.07
Upf1Q9EPU0 Snora24-201ENSMUST00000174989 130 ntBASIC2.11□□□□□ -2.07
Upf1Q9EPU0 Gm24805-201ENSMUST00000082931 104 ntBASIC2.11□□□□□ -2.07
Upf1Q9EPU0 Gm24445-201ENSMUST00000083981 107 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 137.8 ms