Protein–RNA interactions for Protein: Q9DB90

Smg9, Protein SMG9, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg9Q9DB90 Gm25449-201ENSMUST00000179389 79 ntBASIC2.55□□□□□ -2
Smg9Q9DB90 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC2.55□□□□□ -2
Smg9Q9DB90 Gm25820-202ENSMUST00000197479 128 ntBASIC2.55□□□□□ -2
Smg9Q9DB90 Gm42935-201ENSMUST00000202004 151 ntBASIC2.55□□□□□ -2
Smg9Q9DB90 AC153950.1-201ENSMUST00000219916 3238 ntBASIC2.54□□□□□ -2
Smg9Q9DB90 Gm25485-201ENSMUST00000104120 132 ntBASIC2.54□□□□□ -2
Smg9Q9DB90 Gm26213-201ENSMUST00000158582 110 ntBASIC2.54□□□□□ -2
Smg9Q9DB90 Mir6379-201ENSMUST00000183392 115 ntBASIC2.54□□□□□ -2
Smg9Q9DB90 Gm44903-201ENSMUST00000206840 130 ntBASIC2.54□□□□□ -2
Smg9Q9DB90 Snora3-201ENSMUST00000083082 132 ntBASIC2.54□□□□□ -2
Smg9Q9DB90 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Smg9Q9DB90 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Smg9Q9DB90 Gm9009-201ENSMUST00000117321 326 ntBASIC2.53□□□□□ -2
Smg9Q9DB90 Gm24946-201ENSMUST00000158332 106 ntBASIC2.53□□□□□ -2
Smg9Q9DB90 Gm22503-201ENSMUST00000158983 115 ntBASIC2.53□□□□□ -2
Smg9Q9DB90 Gm25241-201ENSMUST00000174909 84 ntBASIC2.53□□□□□ -2
Smg9Q9DB90 Gm26217-201ENSMUST00000175212 84 ntBASIC2.53□□□□□ -2
Smg9Q9DB90 Gm25750-201ENSMUST00000175483 112 ntBASIC2.53□□□□□ -2
Smg9Q9DB90 Gm25337-201ENSMUST00000083723 104 ntBASIC2.53□□□□□ -2
Smg9Q9DB90 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.52□□□□□ -2.01
Smg9Q9DB90 Gm26341-201ENSMUST00000104561 134 ntBASIC2.52□□□□□ -2.01
Smg9Q9DB90 Gm23065-201ENSMUST00000158236 130 ntBASIC2.52□□□□□ -2.01
Smg9Q9DB90 Mir6405-201ENSMUST00000184584 124 ntBASIC2.52□□□□□ -2.01
Smg9Q9DB90 Trbv25-201ENSMUST00000194700 273 ntBASIC2.52□□□□□ -2.01
Smg9Q9DB90 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.52□□□□□ -2.01
Smg9Q9DB90 Mir669d-201ENSMUST00000104644 121 ntBASIC2.51□□□□□ -2.01
Smg9Q9DB90 Gm16328-201ENSMUST00000126985 196 ntBASIC2.51□□□□□ -2.01
Smg9Q9DB90 Gm22425-201ENSMUST00000158532 138 ntBASIC2.51□□□□□ -2.01
Smg9Q9DB90 Gm20391-201ENSMUST00000174722 106 ntBASIC2.51□□□□□ -2.01
Smg9Q9DB90 Gm22264-201ENSMUST00000178200 107 ntBASIC2.51□□□□□ -2.01
Smg9Q9DB90 Gm3852-201ENSMUST00000182781 264 ntBASIC2.51□□□□□ -2.01
Smg9Q9DB90 Mir8090-201ENSMUST00000185078 136 ntBASIC2.51□□□□□ -2.01
Smg9Q9DB90 Mir6925-201ENSMUST00000197857 70 ntBASIC2.51□□□□□ -2.01
Smg9Q9DB90 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Smg9Q9DB90 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Smg9Q9DB90 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.5□□□□□ -2.01
Smg9Q9DB90 Gm25788-201ENSMUST00000082721 131 ntBASIC2.5□□□□□ -2.01
Smg9Q9DB90 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.5□□□□□ -2.01
Smg9Q9DB90 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC2.49□□□□□ -2.01
Smg9Q9DB90 Mir344e-201ENSMUST00000104677 66 ntBASIC2.49□□□□□ -2.01
Smg9Q9DB90 Gm23600-201ENSMUST00000157260 71 ntBASIC2.49□□□□□ -2.01
Smg9Q9DB90 Gm24436-201ENSMUST00000157889 302 ntBASIC2.49□□□□□ -2.01
Smg9Q9DB90 Gm22540-201ENSMUST00000158168 117 ntBASIC2.49□□□□□ -2.01
Smg9Q9DB90 Gm24880-201ENSMUST00000158776 85 ntBASIC2.49□□□□□ -2.01
Smg9Q9DB90 Gm23375-201ENSMUST00000175407 83 ntBASIC2.49□□□□□ -2.01
Smg9Q9DB90 Gm3724-201ENSMUST00000197957 349 ntBASIC2.49□□□□□ -2.01
Smg9Q9DB90 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.49□□□□□ -2.01
Smg9Q9DB90 Mir1a-1-201ENSMUST00000093635 77 ntBASIC2.49□□□□□ -2.01
Smg9Q9DB90 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2.49□□□□□ -2.01
Smg9Q9DB90 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Smg9Q9DB90 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
Smg9Q9DB90 Gm16550-201ENSMUST00000162550 126 ntBASIC2.48□□□□□ -2.01
Smg9Q9DB90 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC2.48□□□□□ -2.01
Smg9Q9DB90 Gm22884-201ENSMUST00000083127 140 ntBASIC2.48□□□□□ -2.01
Smg9Q9DB90 Gm24212-201ENSMUST00000158258 132 ntBASIC2.47□□□□□ -2.01
Smg9Q9DB90 Gm22416-201ENSMUST00000158590 88 ntBASIC2.47□□□□□ -2.01
Smg9Q9DB90 Gm25119-201ENSMUST00000158815 88 ntBASIC2.47□□□□□ -2.01
Smg9Q9DB90 Gm44462-201ENSMUST00000199696 129 ntBASIC2.47□□□□□ -2.01
Smg9Q9DB90 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.47□□□□□ -2.01
Smg9Q9DB90 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.47□□□□□ -2.01
Smg9Q9DB90 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Smg9Q9DB90 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.46□□□□□ -2.02
Smg9Q9DB90 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Smg9Q9DB90 Gm26369-201ENSMUST00000157825 100 ntBASIC2.46□□□□□ -2.02
Smg9Q9DB90 Gm22517-201ENSMUST00000158265 136 ntBASIC2.46□□□□□ -2.02
Smg9Q9DB90 Gm25011-201ENSMUST00000158398 126 ntBASIC2.46□□□□□ -2.02
Smg9Q9DB90 Gm23005-201ENSMUST00000158950 136 ntBASIC2.46□□□□□ -2.02
Smg9Q9DB90 Gm22858-201ENSMUST00000174972 76 ntBASIC2.46□□□□□ -2.02
Smg9Q9DB90 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.46□□□□□ -2.02
Smg9Q9DB90 Gm24527-201ENSMUST00000082920 107 ntBASIC2.46□□□□□ -2.02
Smg9Q9DB90 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
Smg9Q9DB90 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Smg9Q9DB90 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.46□□□□□ -2.02
Smg9Q9DB90 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.45□□□□□ -2.02
Smg9Q9DB90 Gm24203-201ENSMUST00000082949 114 ntBASIC2.45□□□□□ -2.02
Smg9Q9DB90 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.45□□□□□ -2.02
Smg9Q9DB90 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
Smg9Q9DB90 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Smg9Q9DB90 Gm15654-201ENSMUST00000152660 300 ntBASIC2.44□□□□□ -2.02
Smg9Q9DB90 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.44□□□□□ -2.02
Smg9Q9DB90 Gm23470-201ENSMUST00000157129 120 ntBASIC2.44□□□□□ -2.02
Smg9Q9DB90 Gm25044-201ENSMUST00000158603 104 ntBASIC2.44□□□□□ -2.02
Smg9Q9DB90 Gm23917-201ENSMUST00000175256 98 ntBASIC2.44□□□□□ -2.02
Smg9Q9DB90 Gm25949-201ENSMUST00000175333 114 ntBASIC2.44□□□□□ -2.02
Smg9Q9DB90 Gm27959-201ENSMUST00000185172 111 ntBASIC2.44□□□□□ -2.02
Smg9Q9DB90 AC159093.2-201ENSMUST00000227881 297 ntBASIC2.44□□□□□ -2.02
Smg9Q9DB90 mt-Tc-201ENSMUST00000082400 66 ntBASIC2.44□□□□□ -2.02
Smg9Q9DB90 Mir30c-2-201ENSMUST00000083633 84 ntBASIC2.44□□□□□ -2.02
Smg9Q9DB90 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.43□□□□□ -2.02
Smg9Q9DB90 Gm44560-201ENSMUST00000207816 3115 ntBASIC2.43□□□□□ -2.02
Smg9Q9DB90 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Smg9Q9DB90 Snora36b-201ENSMUST00000104383 132 ntBASIC2.43□□□□□ -2.02
Smg9Q9DB90 Gm14923-201ENSMUST00000118270 155 ntBASIC2.43□□□□□ -2.02
Smg9Q9DB90 Gm14588-201ENSMUST00000119895 172 ntBASIC2.43□□□□□ -2.02
Smg9Q9DB90 Gm16539-201ENSMUST00000160086 327 ntBASIC2.43□□□□□ -2.02
Smg9Q9DB90 Mir322-201ENSMUST00000083484 95 ntBASIC2.43□□□□□ -2.02
Smg9Q9DB90 Gm24523-201ENSMUST00000083965 132 ntBASIC2.43□□□□□ -2.02
Smg9Q9DB90 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Smg9Q9DB90 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
Smg9Q9DB90 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.42□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 132.8 ms