Protein–RNA interactions for Protein: Q9DAL3

Ccdc54, Coiled-coil domain-containing protein 54, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54Q9DAL3 Snord80-202ENSMUST00000199023 77 ntBASIC0.67□□□□□ -2.3
Ccdc54Q9DAL3 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.67□□□□□ -2.3
Ccdc54Q9DAL3 AC192091.2-201ENSMUST00000217869 117 ntBASIC0.67□□□□□ -2.3
Ccdc54Q9DAL3 Snord82-201ENSMUST00000082889 70 ntBASIC0.67□□□□□ -2.3
Ccdc54Q9DAL3 Snord32a-201ENSMUST00000083285 83 ntBASIC0.67□□□□□ -2.3
Ccdc54Q9DAL3 Mir500-201ENSMUST00000093600 92 ntBASIC0.67□□□□□ -2.3
Ccdc54Q9DAL3 Mir695-201ENSMUST00000102261 109 ntBASIC0.66□□□□□ -2.3
Ccdc54Q9DAL3 Gm25506-201ENSMUST00000104339 70 ntBASIC0.66□□□□□ -2.3
Ccdc54Q9DAL3 Gm25565-201ENSMUST00000104605 105 ntBASIC0.66□□□□□ -2.3
Ccdc54Q9DAL3 Gm24500-201ENSMUST00000158447 124 ntBASIC0.66□□□□□ -2.3
Ccdc54Q9DAL3 Gm24547-201ENSMUST00000158649 149 ntBASIC0.66□□□□□ -2.3
Ccdc54Q9DAL3 Gm22476-201ENSMUST00000158902 100 ntBASIC0.66□□□□□ -2.3
Ccdc54Q9DAL3 Gm27285-201ENSMUST00000183875 127 ntBASIC0.66□□□□□ -2.3
Ccdc54Q9DAL3 Mir7052-201ENSMUST00000184821 65 ntBASIC0.66□□□□□ -2.3
Ccdc54Q9DAL3 Gm24624-201ENSMUST00000082617 164 ntBASIC0.66□□□□□ -2.3
Ccdc54Q9DAL3 Gm23461-201ENSMUST00000083265 107 ntBASIC0.66□□□□□ -2.3
Ccdc54Q9DAL3 Mir201-201ENSMUST00000083470 66 ntBASIC0.66□□□□□ -2.3
Ccdc54Q9DAL3 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.66□□□□□ -2.3
Ccdc54Q9DAL3 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
Ccdc54Q9DAL3 Gm24276-201ENSMUST00000102181 110 ntBASIC0.65□□□□□ -2.31
Ccdc54Q9DAL3 Gm24250-201ENSMUST00000157320 135 ntBASIC0.65□□□□□ -2.31
Ccdc54Q9DAL3 Gm24401-201ENSMUST00000157868 91 ntBASIC0.65□□□□□ -2.31
Ccdc54Q9DAL3 Gm26358-201ENSMUST00000158215 97 ntBASIC0.65□□□□□ -2.31
Ccdc54Q9DAL3 Gm25769-201ENSMUST00000158569 127 ntBASIC0.65□□□□□ -2.31
Ccdc54Q9DAL3 Gm23209-201ENSMUST00000158667 110 ntBASIC0.65□□□□□ -2.31
Ccdc54Q9DAL3 Gm26360-201ENSMUST00000158872 103 ntBASIC0.65□□□□□ -2.31
Ccdc54Q9DAL3 Gm23770-201ENSMUST00000178009 108 ntBASIC0.65□□□□□ -2.31
Ccdc54Q9DAL3 Gm22832-201ENSMUST00000178022 108 ntBASIC0.65□□□□□ -2.31
Ccdc54Q9DAL3 Gm23863-201ENSMUST00000178265 108 ntBASIC0.65□□□□□ -2.31
Ccdc54Q9DAL3 Gm24828-201ENSMUST00000178507 108 ntBASIC0.65□□□□□ -2.31
Ccdc54Q9DAL3 Gm23052-201ENSMUST00000178633 108 ntBASIC0.65□□□□□ -2.31
Ccdc54Q9DAL3 Gm25729-201ENSMUST00000179050 108 ntBASIC0.65□□□□□ -2.31
Ccdc54Q9DAL3 Gm25359-201ENSMUST00000179315 108 ntBASIC0.65□□□□□ -2.31
Ccdc54Q9DAL3 Gm22624-201ENSMUST00000179913 108 ntBASIC0.65□□□□□ -2.31
Ccdc54Q9DAL3 Gm44488-201ENSMUST00000199467 119 ntBASIC0.65□□□□□ -2.31
Ccdc54Q9DAL3 Gm23735-201ENSMUST00000082551 134 ntBASIC0.65□□□□□ -2.31
Ccdc54Q9DAL3 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
Ccdc54Q9DAL3 Gm25316-201ENSMUST00000116826 118 ntBASIC0.64□□□□□ -2.31
Ccdc54Q9DAL3 Gm24509-201ENSMUST00000157086 101 ntBASIC0.64□□□□□ -2.31
Ccdc54Q9DAL3 Gm25358-201ENSMUST00000157189 101 ntBASIC0.64□□□□□ -2.31
Ccdc54Q9DAL3 Gm22332-201ENSMUST00000158072 126 ntBASIC0.64□□□□□ -2.31
Ccdc54Q9DAL3 Gm25241-201ENSMUST00000174909 84 ntBASIC0.64□□□□□ -2.31
Ccdc54Q9DAL3 Gm26217-201ENSMUST00000175212 84 ntBASIC0.64□□□□□ -2.31
Ccdc54Q9DAL3 Mir3968-201ENSMUST00000175355 100 ntBASIC0.64□□□□□ -2.31
Ccdc54Q9DAL3 Mir6928-201ENSMUST00000185166 70 ntBASIC0.64□□□□□ -2.31
Ccdc54Q9DAL3 Mir1a-2-201ENSMUST00000198520 72 ntBASIC0.64□□□□□ -2.31
Ccdc54Q9DAL3 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.64□□□□□ -2.31
Ccdc54Q9DAL3 Gm44853-201ENSMUST00000209070 250 ntBASIC0.64□□□□□ -2.31
Ccdc54Q9DAL3 Gm22576-201ENSMUST00000083733 104 ntBASIC0.64□□□□□ -2.31
Ccdc54Q9DAL3 Gm22786-201ENSMUST00000104086 122 ntBASIC0.63□□□□□ -2.31
Ccdc54Q9DAL3 Gm12432-201ENSMUST00000119540 186 ntBASIC0.63□□□□□ -2.31
Ccdc54Q9DAL3 Gm24476-201ENSMUST00000157437 131 ntBASIC0.63□□□□□ -2.31
Ccdc54Q9DAL3 Gm23080-201ENSMUST00000157846 103 ntBASIC0.63□□□□□ -2.31
Ccdc54Q9DAL3 Gm22989-201ENSMUST00000158313 86 ntBASIC0.63□□□□□ -2.31
Ccdc54Q9DAL3 Gm25166-201ENSMUST00000158909 111 ntBASIC0.63□□□□□ -2.31
Ccdc54Q9DAL3 Gm17020-201ENSMUST00000172274 274 ntBASIC0.63□□□□□ -2.31
Ccdc54Q9DAL3 Gm22621-201ENSMUST00000179678 74 ntBASIC0.63□□□□□ -2.31
Ccdc54Q9DAL3 Gm42795-201ENSMUST00000198847 76 ntBASIC0.63□□□□□ -2.31
Ccdc54Q9DAL3 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.63□□□□□ -2.31
Ccdc54Q9DAL3 Gm22738-201ENSMUST00000083440 147 ntBASIC0.63□□□□□ -2.31
Ccdc54Q9DAL3 Mir411-201ENSMUST00000083543 82 ntBASIC0.63□□□□□ -2.31
Ccdc54Q9DAL3 Mir216a-201ENSMUST00000083605 72 ntBASIC0.63□□□□□ -2.31
Ccdc54Q9DAL3 Mir488-201ENSMUST00000093595 109 ntBASIC0.63□□□□□ -2.31
Ccdc54Q9DAL3 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Ccdc54Q9DAL3 Gm25985-201ENSMUST00000122677 107 ntBASIC0.62□□□□□ -2.31
Ccdc54Q9DAL3 Mir15a-201ENSMUST00000175266 84 ntBASIC0.62□□□□□ -2.31
Ccdc54Q9DAL3 Gm22801-201ENSMUST00000175624 84 ntBASIC0.62□□□□□ -2.31
Ccdc54Q9DAL3 Mir6369-201ENSMUST00000183772 106 ntBASIC0.62□□□□□ -2.31
Ccdc54Q9DAL3 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.62□□□□□ -2.31
Ccdc54Q9DAL3 Mir471-201ENSMUST00000093596 67 ntBASIC0.62□□□□□ -2.31
Ccdc54Q9DAL3 Gm24579-201ENSMUST00000103964 144 ntBASIC0.61□□□□□ -2.31
Ccdc54Q9DAL3 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.61□□□□□ -2.31
Ccdc54Q9DAL3 Gm26123-201ENSMUST00000083363 135 ntBASIC0.61□□□□□ -2.31
Ccdc54Q9DAL3 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.61□□□□□ -2.31
Ccdc54Q9DAL3 Mir302d-201ENSMUST00000083513 66 ntBASIC0.61□□□□□ -2.31
Ccdc54Q9DAL3 Gm21940-201ENSMUST00000204940 2278 ntBASIC0.61□□□□□ -2.31
Ccdc54Q9DAL3 Gm26338-201ENSMUST00000102372 110 ntBASIC0.6□□□□□ -2.31
Ccdc54Q9DAL3 Snord69-201ENSMUST00000104024 80 ntBASIC0.6□□□□□ -2.31
Ccdc54Q9DAL3 Snord70-201ENSMUST00000104157 87 ntBASIC0.6□□□□□ -2.31
Ccdc54Q9DAL3 Gm22195-201ENSMUST00000116861 108 ntBASIC0.6□□□□□ -2.31
Ccdc54Q9DAL3 Gm23838-201ENSMUST00000158067 162 ntBASIC0.6□□□□□ -2.31
Ccdc54Q9DAL3 Gm24728-201ENSMUST00000158226 125 ntBASIC0.6□□□□□ -2.31
Ccdc54Q9DAL3 Gm24678-201ENSMUST00000158756 104 ntBASIC0.6□□□□□ -2.31
Ccdc54Q9DAL3 Mir1933-201ENSMUST00000158930 88 ntBASIC0.6□□□□□ -2.31
Ccdc54Q9DAL3 Mir1954-201ENSMUST00000175595 86 ntBASIC0.6□□□□□ -2.31
Ccdc54Q9DAL3 Gm27465-201ENSMUST00000184290 91 ntBASIC0.6□□□□□ -2.31
Ccdc54Q9DAL3 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Ccdc54Q9DAL3 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
Ccdc54Q9DAL3 Gm24457-201ENSMUST00000083196 105 ntBASIC0.6□□□□□ -2.31
Ccdc54Q9DAL3 Gm24030-201ENSMUST00000083931 164 ntBASIC0.6□□□□□ -2.31
Ccdc54Q9DAL3 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.6□□□□□ -2.31
Ccdc54Q9DAL3 Gm22482-201ENSMUST00000122563 359 ntBASIC0.59□□□□□ -2.31
Ccdc54Q9DAL3 Gm24747-201ENSMUST00000157835 87 ntBASIC0.59□□□□□ -2.31
Ccdc54Q9DAL3 Gm22946-201ENSMUST00000158558 82 ntBASIC0.59□□□□□ -2.31
Ccdc54Q9DAL3 Gm16307-201ENSMUST00000161269 210 ntBASIC0.59□□□□□ -2.31
Ccdc54Q9DAL3 Gm23864-201ENSMUST00000177607 107 ntBASIC0.59□□□□□ -2.31
Ccdc54Q9DAL3 Gm44922-201ENSMUST00000206690 90 ntBASIC0.59□□□□□ -2.31
Ccdc54Q9DAL3 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.59□□□□□ -2.31
Ccdc54Q9DAL3 Gm26301-201ENSMUST00000104813 95 ntBASIC0.58□□□□□ -2.32
Ccdc54Q9DAL3 Gm14039-201ENSMUST00000118705 101 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 206.6 ms