Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Snord72-201ENSMUST00000104549 81 ntBASIC1.32□□□□□ -2.2
Ddx56Q9D0R4 Gm24238-201ENSMUST00000157792 98 ntBASIC1.32□□□□□ -2.2
Ddx56Q9D0R4 Gm22967-201ENSMUST00000157956 239 ntBASIC1.32□□□□□ -2.2
Ddx56Q9D0R4 Gm24131-201ENSMUST00000158539 107 ntBASIC1.32□□□□□ -2.2
Ddx56Q9D0R4 Gm24865-201ENSMUST00000103246 96 ntBASIC1.31□□□□□ -2.2
Ddx56Q9D0R4 Mir8090-201ENSMUST00000185078 136 ntBASIC1.31□□□□□ -2.2
Ddx56Q9D0R4 Gm18213-201ENSMUST00000207850 178 ntBASIC1.31□□□□□ -2.2
Ddx56Q9D0R4 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC1.31□□□□□ -2.2
Ddx56Q9D0R4 Gm8508-201ENSMUST00000061226 363 ntBASIC1.31□□□□□ -2.2
Ddx56Q9D0R4 Mir211-201ENSMUST00000083651 106 ntBASIC1.31□□□□□ -2.2
Ddx56Q9D0R4 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
Ddx56Q9D0R4 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Ddx56Q9D0R4 Gm23336-201ENSMUST00000117023 123 ntBASIC1.3□□□□□ -2.2
Ddx56Q9D0R4 Gm22079-201ENSMUST00000157592 106 ntBASIC1.3□□□□□ -2.2
Ddx56Q9D0R4 Gm16550-201ENSMUST00000162550 126 ntBASIC1.3□□□□□ -2.2
Ddx56Q9D0R4 Mir411-201ENSMUST00000083543 82 ntBASIC1.3□□□□□ -2.2
Ddx56Q9D0R4 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1.3□□□□□ -2.2
Ddx56Q9D0R4 Gm25938-201ENSMUST00000104139 166 ntBASIC1.29□□□□□ -2.2
Ddx56Q9D0R4 Gm26274-201ENSMUST00000157103 321 ntBASIC1.29□□□□□ -2.2
Ddx56Q9D0R4 Mir21b-201ENSMUST00000184317 108 ntBASIC1.29□□□□□ -2.2
Ddx56Q9D0R4 Mir6481-201ENSMUST00000184617 110 ntBASIC1.29□□□□□ -2.2
Ddx56Q9D0R4 Gm18665-201ENSMUST00000189783 270 ntBASIC1.29□□□□□ -2.2
Ddx56Q9D0R4 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Ddx56Q9D0R4 Gm43898-201ENSMUST00000204456 424 ntBASIC1.29□□□□□ -2.2
Ddx56Q9D0R4 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Ddx56Q9D0R4 Gm23990-201ENSMUST00000117031 117 ntBASIC1.28□□□□□ -2.2
Ddx56Q9D0R4 Gm25716-201ENSMUST00000158628 104 ntBASIC1.28□□□□□ -2.2
Ddx56Q9D0R4 Mir6377-201ENSMUST00000183760 114 ntBASIC1.28□□□□□ -2.2
Ddx56Q9D0R4 Gm27898-201ENSMUST00000183987 80 ntBASIC1.28□□□□□ -2.2
Ddx56Q9D0R4 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Ddx56Q9D0R4 Gm24616-201ENSMUST00000083274 139 ntBASIC1.28□□□□□ -2.2
Ddx56Q9D0R4 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.27□□□□□ -2.21
Ddx56Q9D0R4 Gm14502-201ENSMUST00000118154 113 ntBASIC1.27□□□□□ -2.21
Ddx56Q9D0R4 Gm24509-201ENSMUST00000157086 101 ntBASIC1.27□□□□□ -2.21
Ddx56Q9D0R4 Gm25358-201ENSMUST00000157189 101 ntBASIC1.27□□□□□ -2.21
Ddx56Q9D0R4 Gm26358-201ENSMUST00000158215 97 ntBASIC1.27□□□□□ -2.21
Ddx56Q9D0R4 Gm24106-201ENSMUST00000175498 127 ntBASIC1.27□□□□□ -2.21
Ddx56Q9D0R4 Gm22801-201ENSMUST00000175624 84 ntBASIC1.27□□□□□ -2.21
Ddx56Q9D0R4 Mir7063-201ENSMUST00000184158 91 ntBASIC1.27□□□□□ -2.21
Ddx56Q9D0R4 Gm28794-201ENSMUST00000185276 136 ntBASIC1.27□□□□□ -2.21
Ddx56Q9D0R4 Snord61-201ENSMUST00000083176 71 ntBASIC1.27□□□□□ -2.21
Ddx56Q9D0R4 Gm23337-201ENSMUST00000158959 118 ntBASIC1.26□□□□□ -2.21
Ddx56Q9D0R4 Gm22887-201ENSMUST00000178586 107 ntBASIC1.26□□□□□ -2.21
Ddx56Q9D0R4 Gm22105-201ENSMUST00000116734 116 ntBASIC1.25□□□□□ -2.21
Ddx56Q9D0R4 Gm22485-201ENSMUST00000157990 109 ntBASIC1.25□□□□□ -2.21
Ddx56Q9D0R4 Gm23859-201ENSMUST00000158383 64 ntBASIC1.25□□□□□ -2.21
Ddx56Q9D0R4 Gm22139-201ENSMUST00000158747 105 ntBASIC1.25□□□□□ -2.21
Ddx56Q9D0R4 Mir7091-201ENSMUST00000184075 79 ntBASIC1.25□□□□□ -2.21
Ddx56Q9D0R4 Mir6928-201ENSMUST00000185166 70 ntBASIC1.25□□□□□ -2.21
Ddx56Q9D0R4 Gm22980-201ENSMUST00000082608 70 ntBASIC1.25□□□□□ -2.21
Ddx56Q9D0R4 Gm23377-201ENSMUST00000082943 126 ntBASIC1.25□□□□□ -2.21
Ddx56Q9D0R4 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Ddx56Q9D0R4 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Ddx56Q9D0R4 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Ddx56Q9D0R4 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Ddx56Q9D0R4 Gm25377-201ENSMUST00000104334 129 ntBASIC1.24□□□□□ -2.21
Ddx56Q9D0R4 Gm23320-201ENSMUST00000104462 127 ntBASIC1.24□□□□□ -2.21
Ddx56Q9D0R4 Mir3969-201ENSMUST00000197106 92 ntBASIC1.24□□□□□ -2.21
Ddx56Q9D0R4 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.24□□□□□ -2.21
Ddx56Q9D0R4 Gm44338-201ENSMUST00000198614 110 ntBASIC1.24□□□□□ -2.21
Ddx56Q9D0R4 AL627387.1-201ENSMUST00000226063 250 ntBASIC1.24□□□□□ -2.21
Ddx56Q9D0R4 Mir19b-2-201ENSMUST00000083539 84 ntBASIC1.24□□□□□ -2.21
Ddx56Q9D0R4 Snord35a-201ENSMUST00000083884 90 ntBASIC1.24□□□□□ -2.21
Ddx56Q9D0R4 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Ddx56Q9D0R4 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.23□□□□□ -2.21
Ddx56Q9D0R4 Gm25610-201ENSMUST00000104016 129 ntBASIC1.23□□□□□ -2.21
Ddx56Q9D0R4 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.23□□□□□ -2.21
Ddx56Q9D0R4 Gm22332-201ENSMUST00000158072 126 ntBASIC1.23□□□□□ -2.21
Ddx56Q9D0R4 Mir8119-201ENSMUST00000183371 129 ntBASIC1.23□□□□□ -2.21
Ddx56Q9D0R4 Gm27928-201ENSMUST00000183747 256 ntBASIC1.23□□□□□ -2.21
Ddx56Q9D0R4 Gm27446-201ENSMUST00000183963 89 ntBASIC1.23□□□□□ -2.21
Ddx56Q9D0R4 Gm37545-201ENSMUST00000186512 148 ntBASIC1.23□□□□□ -2.21
Ddx56Q9D0R4 Gm44322-201ENSMUST00000196830 115 ntBASIC1.23□□□□□ -2.21
Ddx56Q9D0R4 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Ddx56Q9D0R4 Gm23838-201ENSMUST00000158067 162 ntBASIC1.22□□□□□ -2.21
Ddx56Q9D0R4 Mir3098-201ENSMUST00000175416 87 ntBASIC1.22□□□□□ -2.21
Ddx56Q9D0R4 Gm7258-201ENSMUST00000179317 300 ntBASIC1.22□□□□□ -2.21
Ddx56Q9D0R4 Gm20118-201ENSMUST00000187207 162 ntBASIC1.22□□□□□ -2.21
Ddx56Q9D0R4 Ighv15-1-201ENSMUST00000194450 276 ntBASIC1.22□□□□□ -2.21
Ddx56Q9D0R4 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC1.22□□□□□ -2.21
Ddx56Q9D0R4 Gm25980-201ENSMUST00000157176 218 ntBASIC1.21□□□□□ -2.22
Ddx56Q9D0R4 Gm23893-201ENSMUST00000158106 134 ntBASIC1.21□□□□□ -2.22
Ddx56Q9D0R4 Mir3079-201ENSMUST00000175428 90 ntBASIC1.21□□□□□ -2.22
Ddx56Q9D0R4 Gm38323-201ENSMUST00000192450 210 ntBASIC1.21□□□□□ -2.22
Ddx56Q9D0R4 Mir3087-201ENSMUST00000199405 56 ntBASIC1.21□□□□□ -2.22
Ddx56Q9D0R4 AC124739.2-201ENSMUST00000222201 109 ntBASIC1.21□□□□□ -2.22
Ddx56Q9D0R4 Mir33-201ENSMUST00000083531 69 ntBASIC1.21□□□□□ -2.22
Ddx56Q9D0R4 Gm23083-201ENSMUST00000157851 116 ntBASIC1.2□□□□□ -2.22
Ddx56Q9D0R4 Mir15a-201ENSMUST00000175266 84 ntBASIC1.2□□□□□ -2.22
Ddx56Q9D0R4 Gm22699-201ENSMUST00000175376 105 ntBASIC1.2□□□□□ -2.22
Ddx56Q9D0R4 Mir101a-201ENSMUST00000083517 83 ntBASIC1.2□□□□□ -2.22
Ddx56Q9D0R4 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Ddx56Q9D0R4 Gm22373-201ENSMUST00000104584 89 ntBASIC1.19□□□□□ -2.22
Ddx56Q9D0R4 Gm22796-201ENSMUST00000157234 106 ntBASIC1.19□□□□□ -2.22
Ddx56Q9D0R4 Gm24547-201ENSMUST00000158649 149 ntBASIC1.19□□□□□ -2.22
Ddx56Q9D0R4 Mir7009-201ENSMUST00000184519 64 ntBASIC1.19□□□□□ -2.22
Ddx56Q9D0R4 Gm44320-201ENSMUST00000199276 86 ntBASIC1.19□□□□□ -2.22
Ddx56Q9D0R4 Gm24527-201ENSMUST00000082920 107 ntBASIC1.19□□□□□ -2.22
Ddx56Q9D0R4 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.18□□□□□ -2.22
Ddx56Q9D0R4 Gm26089-201ENSMUST00000157898 107 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 190.3 ms