Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Mir6237-201ENSMUST00000183808 91 ntBASIC2.64□□□□□ -1.99
Trim11Q99PQ2 Mir3069-201ENSMUST00000198802 65 ntBASIC2.64□□□□□ -1.99
Trim11Q99PQ2 mt-Tl2-201ENSMUST00000082417 71 ntBASIC2.64□□□□□ -1.99
Trim11Q99PQ2 Gm24805-201ENSMUST00000082931 104 ntBASIC2.64□□□□□ -1.99
Trim11Q99PQ2 Gm26494-201ENSMUST00000083154 143 ntBASIC2.64□□□□□ -1.99
Trim11Q99PQ2 Gm24493-201ENSMUST00000083805 143 ntBASIC2.64□□□□□ -1.99
Trim11Q99PQ2 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.64□□□□□ -1.99
Trim11Q99PQ2 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Trim11Q99PQ2 Mir344c-201ENSMUST00000103919 92 ntBASIC2.63□□□□□ -1.99
Trim11Q99PQ2 Gm22782-201ENSMUST00000104082 132 ntBASIC2.63□□□□□ -1.99
Trim11Q99PQ2 Gm23803-201ENSMUST00000104610 132 ntBASIC2.63□□□□□ -1.99
Trim11Q99PQ2 Gm23854-201ENSMUST00000158378 108 ntBASIC2.63□□□□□ -1.99
Trim11Q99PQ2 Gm23860-201ENSMUST00000179446 132 ntBASIC2.63□□□□□ -1.99
Trim11Q99PQ2 Gm27878-201ENSMUST00000184000 106 ntBASIC2.63□□□□□ -1.99
Trim11Q99PQ2 Gm27639-201ENSMUST00000184937 85 ntBASIC2.63□□□□□ -1.99
Trim11Q99PQ2 Mir3961-201ENSMUST00000198795 59 ntBASIC2.63□□□□□ -1.99
Trim11Q99PQ2 Gm44807-201ENSMUST00000206115 154 ntBASIC2.63□□□□□ -1.99
Trim11Q99PQ2 Gm25855-201ENSMUST00000082787 72 ntBASIC2.63□□□□□ -1.99
Trim11Q99PQ2 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.63□□□□□ -1.99
Trim11Q99PQ2 Gm22743-201ENSMUST00000083445 133 ntBASIC2.63□□□□□ -1.99
Trim11Q99PQ2 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Trim11Q99PQ2 Gm24122-201ENSMUST00000104107 132 ntBASIC2.62□□□□□ -1.99
Trim11Q99PQ2 Gm26280-201ENSMUST00000157096 101 ntBASIC2.62□□□□□ -1.99
Trim11Q99PQ2 Gm26090-201ENSMUST00000157897 128 ntBASIC2.62□□□□□ -1.99
Trim11Q99PQ2 Gm25066-201ENSMUST00000158145 123 ntBASIC2.62□□□□□ -1.99
Trim11Q99PQ2 Gm22888-201ENSMUST00000158640 77 ntBASIC2.62□□□□□ -1.99
Trim11Q99PQ2 Mir3076-201ENSMUST00000175415 60 ntBASIC2.62□□□□□ -1.99
Trim11Q99PQ2 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.62□□□□□ -1.99
Trim11Q99PQ2 Gm7214-201ENSMUST00000222428 272 ntBASIC2.62□□□□□ -1.99
Trim11Q99PQ2 Gm24313-201ENSMUST00000082561 133 ntBASIC2.62□□□□□ -1.99
Trim11Q99PQ2 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.62□□□□□ -1.99
Trim11Q99PQ2 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
Trim11Q99PQ2 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Trim11Q99PQ2 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Trim11Q99PQ2 Gm26369-201ENSMUST00000157825 100 ntBASIC2.61□□□□□ -1.99
Trim11Q99PQ2 Gm22517-201ENSMUST00000158265 136 ntBASIC2.61□□□□□ -1.99
Trim11Q99PQ2 Gm23005-201ENSMUST00000158950 136 ntBASIC2.61□□□□□ -1.99
Trim11Q99PQ2 Gm42935-201ENSMUST00000202004 151 ntBASIC2.61□□□□□ -1.99
Trim11Q99PQ2 AC069074.1-201ENSMUST00000220048 381 ntBASIC2.61□□□□□ -1.99
Trim11Q99PQ2 Gm22458-201ENSMUST00000082576 107 ntBASIC2.61□□□□□ -1.99
Trim11Q99PQ2 Gm25357-201ENSMUST00000082745 72 ntBASIC2.61□□□□□ -1.99
Trim11Q99PQ2 Mir1a-1-201ENSMUST00000093635 77 ntBASIC2.61□□□□□ -1.99
Trim11Q99PQ2 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.6□□□□□ -1.99
Trim11Q99PQ2 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.6□□□□□ -1.99
Trim11Q99PQ2 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Trim11Q99PQ2 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Trim11Q99PQ2 Gm24937-201ENSMUST00000122597 134 ntBASIC2.6□□□□□ -1.99
Trim11Q99PQ2 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.6□□□□□ -1.99
Trim11Q99PQ2 Gm24769-201ENSMUST00000158506 129 ntBASIC2.6□□□□□ -1.99
Trim11Q99PQ2 Mir6916-201ENSMUST00000184514 63 ntBASIC2.6□□□□□ -1.99
Trim11Q99PQ2 Gm24661-201ENSMUST00000083205 104 ntBASIC2.6□□□□□ -1.99
Trim11Q99PQ2 Mir193a-201ENSMUST00000083461 66 ntBASIC2.6□□□□□ -1.99
Trim11Q99PQ2 Mir30c-2-201ENSMUST00000083633 84 ntBASIC2.6□□□□□ -1.99
Trim11Q99PQ2 Gm22154-201ENSMUST00000083844 131 ntBASIC2.6□□□□□ -1.99
Trim11Q99PQ2 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Trim11Q99PQ2 Gm22768-201ENSMUST00000158366 153 ntBASIC2.59□□□□□ -1.99
Trim11Q99PQ2 Gm27975-201ENSMUST00000184400 101 ntBASIC2.59□□□□□ -1.99
Trim11Q99PQ2 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.59□□□□□ -1.99
Trim11Q99PQ2 AC122335.1-201ENSMUST00000217587 175 ntBASIC2.59□□□□□ -1.99
Trim11Q99PQ2 Gm25611-201ENSMUST00000104017 133 ntBASIC2.58□□□□□ -2
Trim11Q99PQ2 Gm23203-201ENSMUST00000104374 107 ntBASIC2.58□□□□□ -2
Trim11Q99PQ2 Mir880-201ENSMUST00000104809 78 ntBASIC2.58□□□□□ -2
Trim11Q99PQ2 Gm22815-201ENSMUST00000157451 62 ntBASIC2.58□□□□□ -2
Trim11Q99PQ2 Gm24900-201ENSMUST00000158128 134 ntBASIC2.58□□□□□ -2
Trim11Q99PQ2 Gm24656-201ENSMUST00000177548 132 ntBASIC2.58□□□□□ -2
Trim11Q99PQ2 Mir7232-201ENSMUST00000197929 74 ntBASIC2.58□□□□□ -2
Trim11Q99PQ2 AC159093.2-201ENSMUST00000227881 297 ntBASIC2.58□□□□□ -2
Trim11Q99PQ2 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trim11Q99PQ2 Gm11333-201ENSMUST00000119479 148 ntBASIC2.57□□□□□ -2
Trim11Q99PQ2 Gm25740-201ENSMUST00000180247 107 ntBASIC2.57□□□□□ -2
Trim11Q99PQ2 Gm27686-201ENSMUST00000185123 91 ntBASIC2.57□□□□□ -2
Trim11Q99PQ2 Gm28900-201ENSMUST00000185232 156 ntBASIC2.57□□□□□ -2
Trim11Q99PQ2 Mir451a-201ENSMUST00000093557 72 ntBASIC2.57□□□□□ -2
Trim11Q99PQ2 Gm25542-201ENSMUST00000116889 94 ntBASIC2.56□□□□□ -2
Trim11Q99PQ2 Gm16510-201ENSMUST00000153501 249 ntBASIC2.56□□□□□ -2
Trim11Q99PQ2 Gm26004-201ENSMUST00000158804 116 ntBASIC2.56□□□□□ -2
Trim11Q99PQ2 Gm22095-201ENSMUST00000158984 150 ntBASIC2.56□□□□□ -2
Trim11Q99PQ2 Gm16307-201ENSMUST00000161269 210 ntBASIC2.56□□□□□ -2
Trim11Q99PQ2 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.56□□□□□ -2
Trim11Q99PQ2 mt-Tn-201ENSMUST00000082399 71 ntBASIC2.56□□□□□ -2
Trim11Q99PQ2 Gm22866-201ENSMUST00000083947 177 ntBASIC2.56□□□□□ -2
Trim11Q99PQ2 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trim11Q99PQ2 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trim11Q99PQ2 Gm25847-201ENSMUST00000116793 96 ntBASIC2.55□□□□□ -2
Trim11Q99PQ2 Gm23889-201ENSMUST00000122689 104 ntBASIC2.55□□□□□ -2
Trim11Q99PQ2 Gm22083-201ENSMUST00000157586 102 ntBASIC2.55□□□□□ -2
Trim11Q99PQ2 Gm24668-201ENSMUST00000158935 104 ntBASIC2.55□□□□□ -2
Trim11Q99PQ2 Gm3724-201ENSMUST00000197957 349 ntBASIC2.55□□□□□ -2
Trim11Q99PQ2 Gm45471-201ENSMUST00000211270 281 ntBASIC2.55□□□□□ -2
Trim11Q99PQ2 Gm25796-201ENSMUST00000082645 163 ntBASIC2.55□□□□□ -2
Trim11Q99PQ2 Gm25854-201ENSMUST00000082792 72 ntBASIC2.55□□□□□ -2
Trim11Q99PQ2 Mir93-201ENSMUST00000083593 88 ntBASIC2.55□□□□□ -2
Trim11Q99PQ2 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trim11Q99PQ2 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
Trim11Q99PQ2 Gm22082-201ENSMUST00000157587 161 ntBASIC2.54□□□□□ -2
Trim11Q99PQ2 Gm22539-201ENSMUST00000158167 117 ntBASIC2.54□□□□□ -2
Trim11Q99PQ2 Gm24075-201ENSMUST00000158175 72 ntBASIC2.54□□□□□ -2
Trim11Q99PQ2 Gm22140-201ENSMUST00000158745 120 ntBASIC2.54□□□□□ -2
Trim11Q99PQ2 Mir6993-201ENSMUST00000184912 65 ntBASIC2.54□□□□□ -2
Trim11Q99PQ2 Mir6925-201ENSMUST00000197857 70 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms