Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-1.76□□□□□ -2.69
Ccdc58Q8R3Q6 Mir6964-201ENSMUST00000200252 59 ntBASIC-1.76□□□□□ -2.69
Ccdc58Q8R3Q6 Gm5001-201ENSMUST00000204361 331 ntBASIC-1.76□□□□□ -2.69
Ccdc58Q8R3Q6 Gm24171-201ENSMUST00000104126 131 ntBASIC-1.77□□□□□ -2.69
Ccdc58Q8R3Q6 Gm22815-201ENSMUST00000157451 62 ntBASIC-1.77□□□□□ -2.69
Ccdc58Q8R3Q6 Gm24129-201ENSMUST00000158537 97 ntBASIC-1.77□□□□□ -2.69
Ccdc58Q8R3Q6 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC-1.77□□□□□ -2.69
Ccdc58Q8R3Q6 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-1.77□□□□□ -2.69
Ccdc58Q8R3Q6 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC-1.77□□□□□ -2.69
Ccdc58Q8R3Q6 Gm6369-201ENSMUST00000069626 412 ntBASIC-1.77□□□□□ -2.69
Ccdc58Q8R3Q6 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-1.77□□□□□ -2.69
Ccdc58Q8R3Q6 Gm23423-201ENSMUST00000082782 106 ntBASIC-1.77□□□□□ -2.69
Ccdc58Q8R3Q6 Gm24073-201ENSMUST00000158177 106 ntBASIC-1.78□□□□□ -2.69
Ccdc58Q8R3Q6 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.78□□□□□ -2.69
Ccdc58Q8R3Q6 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC-1.78□□□□□ -2.69
Ccdc58Q8R3Q6 Gm25078-201ENSMUST00000082530 107 ntBASIC-1.78□□□□□ -2.69
Ccdc58Q8R3Q6 Gm25131-201ENSMUST00000082653 151 ntBASIC-1.78□□□□□ -2.69
Ccdc58Q8R3Q6 Snord38a-201ENSMUST00000083746 71 ntBASIC-1.78□□□□□ -2.69
Ccdc58Q8R3Q6 Gm14126-201ENSMUST00000122345 395 ntBASIC-1.79□□□□□ -2.7
Ccdc58Q8R3Q6 Gm24250-201ENSMUST00000157320 135 ntBASIC-1.79□□□□□ -2.7
Ccdc58Q8R3Q6 Gm25974-201ENSMUST00000158701 94 ntBASIC-1.79□□□□□ -2.7
Ccdc58Q8R3Q6 Gm24487-201ENSMUST00000178017 63 ntBASIC-1.79□□□□□ -2.7
Ccdc58Q8R3Q6 Gm24761-201ENSMUST00000179589 127 ntBASIC-1.79□□□□□ -2.7
Ccdc58Q8R3Q6 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC-1.79□□□□□ -2.7
Ccdc58Q8R3Q6 Gm25781-201ENSMUST00000122527 84 ntBASIC-1.8□□□□□ -2.7
Ccdc58Q8R3Q6 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC-1.8□□□□□ -2.7
Ccdc58Q8R3Q6 Gm27944-201ENSMUST00000185155 103 ntBASIC-1.8□□□□□ -2.7
Ccdc58Q8R3Q6 Gm44142-201ENSMUST00000203358 311 ntBASIC-1.8□□□□□ -2.7
Ccdc58Q8R3Q6 Gm23492-201ENSMUST00000116837 115 ntBASIC-1.81□□□□□ -2.7
Ccdc58Q8R3Q6 Gm15069-201ENSMUST00000117792 192 ntBASIC-1.81□□□□□ -2.7
Ccdc58Q8R3Q6 Gm15002-201ENSMUST00000118406 452 ntBASIC-1.81□□□□□ -2.7
Ccdc58Q8R3Q6 Gm15068-201ENSMUST00000119796 192 ntBASIC-1.81□□□□□ -2.7
Ccdc58Q8R3Q6 Gm38261-201ENSMUST00000192608 316 ntBASIC-1.81□□□□□ -2.7
Ccdc58Q8R3Q6 Gm38019-201ENSMUST00000195133 380 ntBASIC-1.81□□□□□ -2.7
Ccdc58Q8R3Q6 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC-1.81□□□□□ -2.7
Ccdc58Q8R3Q6 Mir669o-201ENSMUST00000103898 96 ntBASIC-1.82□□□□□ -2.7
Ccdc58Q8R3Q6 Gm26255-201ENSMUST00000122492 103 ntBASIC-1.82□□□□□ -2.7
Ccdc58Q8R3Q6 Gm22999-201ENSMUST00000157082 88 ntBASIC-1.82□□□□□ -2.7
Ccdc58Q8R3Q6 Gm25248-201ENSMUST00000175473 98 ntBASIC-1.82□□□□□ -2.7
Ccdc58Q8R3Q6 Mir6346-201ENSMUST00000183982 81 ntBASIC-1.82□□□□□ -2.7
Ccdc58Q8R3Q6 Gm27977-201ENSMUST00000185159 111 ntBASIC-1.82□□□□□ -2.7
Ccdc58Q8R3Q6 AC154484.1-201ENSMUST00000227311 771 ntBASIC-1.82□□□□□ -2.7
Ccdc58Q8R3Q6 AC112972.1-201ENSMUST00000227329 365 ntBASIC-1.82□□□□□ -2.7
Ccdc58Q8R3Q6 AC160984.1-201ENSMUST00000225855 3154 ntBASIC-1.82□□□□□ -2.7
Ccdc58Q8R3Q6 Gm25538-201ENSMUST00000101943 107 ntBASIC-1.83□□□□□ -2.7
Ccdc58Q8R3Q6 Gm25879-201ENSMUST00000104330 107 ntBASIC-1.83□□□□□ -2.7
Ccdc58Q8R3Q6 Mir1191-201ENSMUST00000116883 120 ntBASIC-1.83□□□□□ -2.7
Ccdc58Q8R3Q6 Gm11407-201ENSMUST00000120362 1058 ntBASIC-1.83□□□□□ -2.7
Ccdc58Q8R3Q6 Gm22883-201ENSMUST00000157376 106 ntBASIC-1.83□□□□□ -2.7
Ccdc58Q8R3Q6 Gm16550-201ENSMUST00000162550 126 ntBASIC-1.83□□□□□ -2.7
Ccdc58Q8R3Q6 Gm23812-201ENSMUST00000175156 84 ntBASIC-1.83□□□□□ -2.7
Ccdc58Q8R3Q6 Gm23374-201ENSMUST00000175408 84 ntBASIC-1.83□□□□□ -2.7
Ccdc58Q8R3Q6 Gm42795-201ENSMUST00000198847 76 ntBASIC-1.84□□□□□ -2.7
Ccdc58Q8R3Q6 Snord45b-201ENSMUST00000082797 71 ntBASIC-1.84□□□□□ -2.7
Ccdc58Q8R3Q6 Gm24490-201ENSMUST00000083803 98 ntBASIC-1.84□□□□□ -2.7
Ccdc58Q8R3Q6 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-1.85□□□□□ -2.71
Ccdc58Q8R3Q6 Mir216b-201ENSMUST00000102363 86 ntBASIC-1.85□□□□□ -2.71
Ccdc58Q8R3Q6 Mir465b-1-201ENSMUST00000103940 79 ntBASIC-1.85□□□□□ -2.71
Ccdc58Q8R3Q6 Mir465b-2-201ENSMUST00000104662 79 ntBASIC-1.85□□□□□ -2.71
Ccdc58Q8R3Q6 Snord98-201ENSMUST00000116819 65 ntBASIC-1.85□□□□□ -2.71
Ccdc58Q8R3Q6 Gm12086-201ENSMUST00000120863 228 ntBASIC-1.85□□□□□ -2.71
Ccdc58Q8R3Q6 Gm14766-201ENSMUST00000121689 367 ntBASIC-1.85□□□□□ -2.71
Ccdc58Q8R3Q6 Gm23958-201ENSMUST00000157207 105 ntBASIC-1.85□□□□□ -2.71
Ccdc58Q8R3Q6 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC-1.85□□□□□ -2.71
Ccdc58Q8R3Q6 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.85□□□□□ -2.71
Ccdc58Q8R3Q6 Gm37438-201ENSMUST00000192813 393 ntBASIC-1.85□□□□□ -2.71
Ccdc58Q8R3Q6 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-1.85□□□□□ -2.71
Ccdc58Q8R3Q6 Gm24921-201ENSMUST00000083024 107 ntBASIC-1.85□□□□□ -2.71
Ccdc58Q8R3Q6 Gm25186-201ENSMUST00000083909 108 ntBASIC-1.85□□□□□ -2.71
Ccdc58Q8R3Q6 Gm13922-201ENSMUST00000119505 156 ntBASIC-1.86□□□□□ -2.71
Ccdc58Q8R3Q6 Gm28648-201ENSMUST00000190092 343 ntBASIC-1.86□□□□□ -2.71
Ccdc58Q8R3Q6 Gm5034-201ENSMUST00000199115 634 ntBASIC-1.86□□□□□ -2.71
Ccdc58Q8R3Q6 Gm44923-201ENSMUST00000206673 85 ntBASIC-1.86□□□□□ -2.71
Ccdc58Q8R3Q6 Gm25801-201ENSMUST00000082638 106 ntBASIC-1.86□□□□□ -2.71
Ccdc58Q8R3Q6 Gm22631-201ENSMUST00000179656 94 ntBASIC-1.87□□□□□ -2.71
Ccdc58Q8R3Q6 Gm42622-201ENSMUST00000197229 355 ntBASIC-1.87□□□□□ -2.71
Ccdc58Q8R3Q6 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC-1.87□□□□□ -2.71
Ccdc58Q8R3Q6 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-1.87□□□□□ -2.71
Ccdc58Q8R3Q6 Mir717-201ENSMUST00000102259 109 ntBASIC-1.88□□□□□ -2.71
Ccdc58Q8R3Q6 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC-1.88□□□□□ -2.71
Ccdc58Q8R3Q6 Gm22542-201ENSMUST00000158166 95 ntBASIC-1.88□□□□□ -2.71
Ccdc58Q8R3Q6 Gm19248-201ENSMUST00000209404 110 ntBASIC-1.88□□□□□ -2.71
Ccdc58Q8R3Q6 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-1.88□□□□□ -2.71
Ccdc58Q8R3Q6 Gm11834-201ENSMUST00000122257 585 ntBASIC-1.89□□□□□ -2.71
Ccdc58Q8R3Q6 Gm24141-201ENSMUST00000122776 115 ntBASIC-1.89□□□□□ -2.71
Ccdc58Q8R3Q6 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC-1.89□□□□□ -2.71
Ccdc58Q8R3Q6 Gm5002-201ENSMUST00000207145 223 ntBASIC-1.89□□□□□ -2.71
Ccdc58Q8R3Q6 AL772265.1-201ENSMUST00000214379 305 ntBASIC-1.89□□□□□ -2.71
Ccdc58Q8R3Q6 CT009550.5-201ENSMUST00000226286 382 ntBASIC-1.89□□□□□ -2.71
Ccdc58Q8R3Q6 Gm12785-201ENSMUST00000122052 172 ntBASIC-1.9□□□□□ -2.71
Ccdc58Q8R3Q6 Gm23655-201ENSMUST00000122627 105 ntBASIC-1.9□□□□□ -2.71
Ccdc58Q8R3Q6 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC-1.9□□□□□ -2.71
Ccdc58Q8R3Q6 Gm22321-201ENSMUST00000157152 104 ntBASIC-1.9□□□□□ -2.71
Ccdc58Q8R3Q6 Gm27749-201ENSMUST00000183651 125 ntBASIC-1.9□□□□□ -2.71
Ccdc58Q8R3Q6 CT030166.3-201ENSMUST00000223203 193 ntBASIC-1.9□□□□□ -2.71
Ccdc58Q8R3Q6 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.91□□□□□ -2.72
Ccdc58Q8R3Q6 Snord116l12-201ENSMUST00000179816 94 ntBASIC-1.91□□□□□ -2.72
Ccdc58Q8R3Q6 Gm23627-201ENSMUST00000082459 107 ntBASIC-1.91□□□□□ -2.72
Ccdc58Q8R3Q6 Gm23216-201ENSMUST00000179545 107 ntBASIC-1.92□□□□□ -2.72
Ccdc58Q8R3Q6 Gm38183-201ENSMUST00000193189 205 ntBASIC-1.92□□□□□ -2.72
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms