Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm14882-201ENSMUST00000117216 218 ntBASIC1.75□□□□□ -2.13
Brf1Q8CFK2 Gm24880-201ENSMUST00000158776 85 ntBASIC1.75□□□□□ -2.13
Brf1Q8CFK2 Gm25838-201ENSMUST00000158920 120 ntBASIC1.75□□□□□ -2.13
Brf1Q8CFK2 Gm25958-201ENSMUST00000175114 71 ntBASIC1.75□□□□□ -2.13
Brf1Q8CFK2 Gm27668-201ENSMUST00000184188 120 ntBASIC1.75□□□□□ -2.13
Brf1Q8CFK2 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.74□□□□□ -2.13
Brf1Q8CFK2 Gm24222-201ENSMUST00000158834 93 ntBASIC1.74□□□□□ -2.13
Brf1Q8CFK2 Gm16539-201ENSMUST00000160086 327 ntBASIC1.74□□□□□ -2.13
Brf1Q8CFK2 Gm44384-201ENSMUST00000200208 114 ntBASIC1.74□□□□□ -2.13
Brf1Q8CFK2 Mir411-201ENSMUST00000083543 82 ntBASIC1.74□□□□□ -2.13
Brf1Q8CFK2 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.73□□□□□ -2.13
Brf1Q8CFK2 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Brf1Q8CFK2 Gm25832-201ENSMUST00000104140 130 ntBASIC1.73□□□□□ -2.13
Brf1Q8CFK2 Gm11792-201ENSMUST00000120640 168 ntBASIC1.73□□□□□ -2.13
Brf1Q8CFK2 Gm22556-201ENSMUST00000157803 100 ntBASIC1.73□□□□□ -2.13
Brf1Q8CFK2 Gm25241-201ENSMUST00000174909 84 ntBASIC1.73□□□□□ -2.13
Brf1Q8CFK2 Snora24-201ENSMUST00000174989 130 ntBASIC1.73□□□□□ -2.13
Brf1Q8CFK2 Gm26217-201ENSMUST00000175212 84 ntBASIC1.73□□□□□ -2.13
Brf1Q8CFK2 Gm22929-201ENSMUST00000175517 107 ntBASIC1.73□□□□□ -2.13
Brf1Q8CFK2 Gm27446-201ENSMUST00000183963 89 ntBASIC1.73□□□□□ -2.13
Brf1Q8CFK2 Gm44962-201ENSMUST00000206460 279 ntBASIC1.73□□□□□ -2.13
Brf1Q8CFK2 Snord1a-201ENSMUST00000083160 74 ntBASIC1.73□□□□□ -2.13
Brf1Q8CFK2 Gm24605-201ENSMUST00000104772 96 ntBASIC1.72□□□□□ -2.13
Brf1Q8CFK2 Gm24895-201ENSMUST00000122742 74 ntBASIC1.72□□□□□ -2.13
Brf1Q8CFK2 Gm24238-201ENSMUST00000157792 98 ntBASIC1.72□□□□□ -2.13
Brf1Q8CFK2 Gm22332-201ENSMUST00000158072 126 ntBASIC1.72□□□□□ -2.13
Brf1Q8CFK2 Gm23221-201ENSMUST00000158118 93 ntBASIC1.72□□□□□ -2.13
Brf1Q8CFK2 Gm22200-201ENSMUST00000158614 67 ntBASIC1.72□□□□□ -2.13
Brf1Q8CFK2 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC1.72□□□□□ -2.13
Brf1Q8CFK2 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Brf1Q8CFK2 Gm25377-201ENSMUST00000104334 129 ntBASIC1.71□□□□□ -2.14
Brf1Q8CFK2 Gm16186-201ENSMUST00000120132 216 ntBASIC1.71□□□□□ -2.14
Brf1Q8CFK2 Gm24718-201ENSMUST00000157521 136 ntBASIC1.71□□□□□ -2.14
Brf1Q8CFK2 Gm23375-201ENSMUST00000175407 83 ntBASIC1.71□□□□□ -2.14
Brf1Q8CFK2 Gm16976-205ENSMUST00000227324 226 ntBASIC1.71□□□□□ -2.14
Brf1Q8CFK2 Gm24165-201ENSMUST00000082718 128 ntBASIC1.71□□□□□ -2.14
Brf1Q8CFK2 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.71□□□□□ -2.14
Brf1Q8CFK2 BC022960-201ENSMUST00000119987 1815 ntBASIC1.7□□□□□ -2.14
Brf1Q8CFK2 Gm23253-201ENSMUST00000157441 104 ntBASIC1.7□□□□□ -2.14
Brf1Q8CFK2 Gm22082-201ENSMUST00000157587 161 ntBASIC1.7□□□□□ -2.14
Brf1Q8CFK2 Gm23122-201ENSMUST00000157645 103 ntBASIC1.7□□□□□ -2.14
Brf1Q8CFK2 Gm23044-201ENSMUST00000157891 100 ntBASIC1.7□□□□□ -2.14
Brf1Q8CFK2 Gm24902-201ENSMUST00000158126 123 ntBASIC1.7□□□□□ -2.14
Brf1Q8CFK2 Gm44408-201ENSMUST00000200205 66 ntBASIC1.7□□□□□ -2.14
Brf1Q8CFK2 Gm23299-201ENSMUST00000082708 79 ntBASIC1.7□□□□□ -2.14
Brf1Q8CFK2 Mir301b-201ENSMUST00000102333 97 ntBASIC1.69□□□□□ -2.14
Brf1Q8CFK2 Gm25611-201ENSMUST00000104017 133 ntBASIC1.69□□□□□ -2.14
Brf1Q8CFK2 Gm22603-201ENSMUST00000157603 96 ntBASIC1.69□□□□□ -2.14
Brf1Q8CFK2 Gm22963-201ENSMUST00000157960 91 ntBASIC1.69□□□□□ -2.14
Brf1Q8CFK2 Gm25011-201ENSMUST00000158398 126 ntBASIC1.69□□□□□ -2.14
Brf1Q8CFK2 Gm25044-201ENSMUST00000158603 104 ntBASIC1.69□□□□□ -2.14
Brf1Q8CFK2 Gm20409-201ENSMUST00000173457 130 ntBASIC1.69□□□□□ -2.14
Brf1Q8CFK2 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.69□□□□□ -2.14
Brf1Q8CFK2 Gm26123-201ENSMUST00000083363 135 ntBASIC1.69□□□□□ -2.14
Brf1Q8CFK2 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Brf1Q8CFK2 Gm24246-201ENSMUST00000157315 132 ntBASIC1.68□□□□□ -2.14
Brf1Q8CFK2 Mir7241-201ENSMUST00000184532 64 ntBASIC1.68□□□□□ -2.14
Brf1Q8CFK2 Gm38298-201ENSMUST00000193578 118 ntBASIC1.68□□□□□ -2.14
Brf1Q8CFK2 Gm26080-201ENSMUST00000104069 131 ntBASIC1.67□□□□□ -2.14
Brf1Q8CFK2 Gm22815-201ENSMUST00000157451 62 ntBASIC1.67□□□□□ -2.14
Brf1Q8CFK2 Gm23289-201ENSMUST00000175615 108 ntBASIC1.67□□□□□ -2.14
Brf1Q8CFK2 Gm28256-201ENSMUST00000188953 139 ntBASIC1.67□□□□□ -2.14
Brf1Q8CFK2 Gm28559-201ENSMUST00000190532 139 ntBASIC1.67□□□□□ -2.14
Brf1Q8CFK2 mt-Tt-201ENSMUST00000082422 67 ntBASIC1.67□□□□□ -2.14
Brf1Q8CFK2 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.67□□□□□ -2.14
Brf1Q8CFK2 Gm14923-201ENSMUST00000118270 155 ntBASIC1.66□□□□□ -2.14
Brf1Q8CFK2 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.66□□□□□ -2.14
Brf1Q8CFK2 Gm26038-201ENSMUST00000158151 106 ntBASIC1.66□□□□□ -2.14
Brf1Q8CFK2 Gm22164-201ENSMUST00000158413 106 ntBASIC1.66□□□□□ -2.14
Brf1Q8CFK2 Mir3094-201ENSMUST00000175121 64 ntBASIC1.66□□□□□ -2.14
Brf1Q8CFK2 Mir7657-201ENSMUST00000196051 57 ntBASIC1.66□□□□□ -2.14
Brf1Q8CFK2 Gm25636-201ENSMUST00000082666 133 ntBASIC1.66□□□□□ -2.14
Brf1Q8CFK2 Gm15289-201ENSMUST00000117793 244 ntBASIC1.65□□□□□ -2.15
Brf1Q8CFK2 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.65□□□□□ -2.15
Brf1Q8CFK2 Gm24616-201ENSMUST00000083274 139 ntBASIC1.65□□□□□ -2.15
Brf1Q8CFK2 Gm24494-201ENSMUST00000083804 81 ntBASIC1.65□□□□□ -2.15
Brf1Q8CFK2 Gm25068-201ENSMUST00000103895 110 ntBASIC1.64□□□□□ -2.15
Brf1Q8CFK2 Snord64-201ENSMUST00000104003 67 ntBASIC1.64□□□□□ -2.15
Brf1Q8CFK2 Gm23106-201ENSMUST00000157554 101 ntBASIC1.64□□□□□ -2.15
Brf1Q8CFK2 Gm22425-201ENSMUST00000158532 138 ntBASIC1.64□□□□□ -2.15
Brf1Q8CFK2 Gm25367-201ENSMUST00000158846 106 ntBASIC1.64□□□□□ -2.15
Brf1Q8CFK2 Gm28862-201ENSMUST00000188246 163 ntBASIC1.64□□□□□ -2.15
Brf1Q8CFK2 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC1.64□□□□□ -2.15
Brf1Q8CFK2 Gm25623-201ENSMUST00000157216 108 ntBASIC1.63□□□□□ -2.15
Brf1Q8CFK2 Gm24677-201ENSMUST00000158755 150 ntBASIC1.63□□□□□ -2.15
Brf1Q8CFK2 Mir6377-201ENSMUST00000183760 114 ntBASIC1.63□□□□□ -2.15
Brf1Q8CFK2 Gm23377-201ENSMUST00000082943 126 ntBASIC1.63□□□□□ -2.15
Brf1Q8CFK2 Gm22451-201ENSMUST00000122803 151 ntBASIC1.62□□□□□ -2.15
Brf1Q8CFK2 Gm24262-201ENSMUST00000157431 144 ntBASIC1.62□□□□□ -2.15
Brf1Q8CFK2 Gm24076-201ENSMUST00000158179 94 ntBASIC1.62□□□□□ -2.15
Brf1Q8CFK2 Gm22802-201ENSMUST00000175621 89 ntBASIC1.62□□□□□ -2.15
Brf1Q8CFK2 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
Brf1Q8CFK2 Gm24705-201ENSMUST00000082808 107 ntBASIC1.62□□□□□ -2.15
Brf1Q8CFK2 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Brf1Q8CFK2 Gm22914-201ENSMUST00000175195 77 ntBASIC1.61□□□□□ -2.15
Brf1Q8CFK2 Gm27365-201ENSMUST00000184041 177 ntBASIC1.61□□□□□ -2.15
Brf1Q8CFK2 Gm42795-201ENSMUST00000198847 76 ntBASIC1.61□□□□□ -2.15
Brf1Q8CFK2 AC147101.2-201ENSMUST00000219756 184 ntBASIC1.61□□□□□ -2.15
Brf1Q8CFK2 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.61□□□□□ -2.15
Brf1Q8CFK2 Gm25006-201ENSMUST00000083813 107 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 140.4 ms