| Cdkl1 | Q8CEQ0 | Gm44811-201 | ENSMUST00000209120 | 228 nt | BASIC | -0.8 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | AC102369.1-201 | ENSMUST00000218415 | 373 nt | BASIC | -0.8 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | AC116589.4-201 | ENSMUST00000222390 | 216 nt | BASIC | -0.8 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm24455-201 | ENSMUST00000083348 | 131 nt | BASIC | -0.8 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm26107-201 | ENSMUST00000083972 | 107 nt | BASIC | -0.8 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm25317-201 | ENSMUST00000116824 | 129 nt | BASIC | -0.81 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm25108-201 | ENSMUST00000122473 | 78 nt | BASIC | -0.81 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm24894-201 | ENSMUST00000122744 | 118 nt | BASIC | -0.81 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm44807-201 | ENSMUST00000206115 | 154 nt | BASIC | -0.81 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm12469-201 | ENSMUST00000117623 | 207 nt | BASIC | -0.82 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Tra2b-ps-201 | ENSMUST00000119906 | 168 nt | BASIC | -0.82 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm22598-201 | ENSMUST00000157600 | 127 nt | BASIC | -0.82 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm26290-201 | ENSMUST00000158891 | 145 nt | BASIC | -0.82 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm25160-201 | ENSMUST00000158914 | 102 nt | BASIC | -0.82 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm25450-201 | ENSMUST00000179144 | 107 nt | BASIC | -0.82 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm27884-201 | ENSMUST00000183865 | 76 nt | BASIC | -0.82 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | AC129019.2-201 | ENSMUST00000222063 | 202 nt | BASIC | -0.82 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm26495-201 | ENSMUST00000083152 | 137 nt | BASIC | -0.82 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Mir103-1-201 | ENSMUST00000083619 | 86 nt | BASIC | -0.82 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Mir669i-201 | ENSMUST00000117007 | 127 nt | BASIC | -0.83 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm23212-201 | ENSMUST00000122718 | 60 nt | BASIC | -0.83 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm22553-201 | ENSMUST00000157797 | 295 nt | BASIC | -0.83 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm24129-201 | ENSMUST00000158537 | 97 nt | BASIC | -0.83 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm10772-201 | ENSMUST00000167981 | 255 nt | APPRIS P1 BASIC | -0.83 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm10715-202 | ENSMUST00000177969 | 681 nt | APPRIS P5 TSL 5 BASIC | -0.83 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm23770-201 | ENSMUST00000178009 | 108 nt | BASIC | -0.83 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm22832-201 | ENSMUST00000178022 | 108 nt | BASIC | -0.83 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm23863-201 | ENSMUST00000178265 | 108 nt | BASIC | -0.83 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm24828-201 | ENSMUST00000178507 | 108 nt | BASIC | -0.83 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm23052-201 | ENSMUST00000178633 | 108 nt | BASIC | -0.83 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm25729-201 | ENSMUST00000179050 | 108 nt | BASIC | -0.83 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm25359-201 | ENSMUST00000179315 | 108 nt | BASIC | -0.83 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm22624-201 | ENSMUST00000179913 | 108 nt | BASIC | -0.83 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | AC164297.5-201 | ENSMUST00000224365 | 198 nt | BASIC | -0.83 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Sprr4-201 | ENSMUST00000062129 | 231 nt | APPRIS P1 BASIC | -0.83 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm25797-201 | ENSMUST00000082640 | 107 nt | BASIC | -0.83 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm22767-201 | ENSMUST00000158365 | 165 nt | BASIC | -0.84 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm22675-201 | ENSMUST00000158430 | 104 nt | BASIC | -0.84 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm23191-201 | ENSMUST00000179147 | 107 nt | BASIC | -0.84 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Mir378c-201 | ENSMUST00000184478 | 99 nt | BASIC | -0.84 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm28398-201 | ENSMUST00000186587 | 166 nt | TSL 5 BASIC | -0.84 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm29653-201 | ENSMUST00000187192 | 166 nt | TSL 5 BASIC | -0.84 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm28810-201 | ENSMUST00000188173 | 166 nt | TSL 5 BASIC | -0.84 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm28575-201 | ENSMUST00000188234 | 166 nt | TSL 5 BASIC | -0.84 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm28132-201 | ENSMUST00000189901 | 166 nt | TSL 5 BASIC | -0.84 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm29580-201 | ENSMUST00000189921 | 166 nt | TSL 5 BASIC | -0.84 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm28858-201 | ENSMUST00000190517 | 166 nt | TSL 5 BASIC | -0.84 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm28210-201 | ENSMUST00000190631 | 166 nt | TSL 5 BASIC | -0.84 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm28336-201 | ENSMUST00000190743 | 166 nt | TSL 5 BASIC | -0.84 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm29042-201 | ENSMUST00000191564 | 166 nt | TSL 5 BASIC | -0.84 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm37998-201 | ENSMUST00000195699 | 166 nt | TSL 5 BASIC | -0.84 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Mir30f-201 | ENSMUST00000196073 | 92 nt | BASIC | -0.84 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm44487-201 | ENSMUST00000205145 | 325 nt | BASIC | -0.84 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | AC153541.1-201 | ENSMUST00000213786 | 294 nt | BASIC | -0.84 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm10226-201 | ENSMUST00000072133 | 255 nt | APPRIS P1 BASIC | -0.84 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Snora19-201 | ENSMUST00000082962 | 132 nt | BASIC | -0.84 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm23658-201 | ENSMUST00000083233 | 132 nt | BASIC | -0.84 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm26108-201 | ENSMUST00000083973 | 191 nt | BASIC | -0.84 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Cdh4-202 | ENSMUST00000098996 | 69 nt | TSL 5 BASIC | -0.84 | □□□□□ -2.54 | | |
| Cdkl1 | Q8CEQ0 | Gm15654-201 | ENSMUST00000152660 | 300 nt | BASIC | -0.85 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm25828-201 | ENSMUST00000157087 | 95 nt | BASIC | -0.85 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm25600-201 | ENSMUST00000158357 | 106 nt | BASIC | -0.85 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm16550-201 | ENSMUST00000162550 | 126 nt | BASIC | -0.85 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm24761-201 | ENSMUST00000179589 | 127 nt | BASIC | -0.85 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | AC145736.2-201 | ENSMUST00000216305 | 365 nt | BASIC | -0.85 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm24275-201 | ENSMUST00000116780 | 146 nt | BASIC | -0.86 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm14906-201 | ENSMUST00000119265 | 390 nt | BASIC | -0.86 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm11407-201 | ENSMUST00000120362 | 1058 nt | BASIC | -0.86 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm24593-201 | ENSMUST00000122507 | 106 nt | BASIC | -0.86 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm24635-201 | ENSMUST00000122712 | 128 nt | BASIC | -0.86 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Vmn1r-ps31-201 | ENSMUST00000174112 | 238 nt | BASIC | -0.86 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm24508-201 | ENSMUST00000180104 | 107 nt | BASIC | -0.86 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm9227-201 | ENSMUST00000194733 | 566 nt | BASIC | -0.86 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | AC116589.3-202 | ENSMUST00000221770 | 649 nt | BASIC | -0.86 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | AC116589.6-201 | ENSMUST00000222252 | 649 nt | BASIC | -0.86 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm27610-201 | ENSMUST00000184026 | 74 nt | BASIC | -0.87 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm44338-201 | ENSMUST00000198614 | 110 nt | BASIC | -0.87 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm24037-201 | ENSMUST00000082871 | 180 nt | BASIC | -0.87 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Mir496a-201 | ENSMUST00000093627 | 79 nt | BASIC | -0.87 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Scgb1b24-201 | ENSMUST00000108087 | 279 nt | APPRIS P1 TSL 1 (best) BASIC | -0.88 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm11116-201 | ENSMUST00000113257 | 54 nt | APPRIS P1 TSL 5 BASIC | -0.88 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm14574-201 | ENSMUST00000120644 | 279 nt | BASIC | -0.88 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm24250-201 | ENSMUST00000157320 | 135 nt | BASIC | -0.88 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm24962-201 | ENSMUST00000157917 | 109 nt | BASIC | -0.88 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm26007-201 | ENSMUST00000158798 | 120 nt | BASIC | -0.88 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm23474-201 | ENSMUST00000158884 | 75 nt | BASIC | -0.88 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm42795-201 | ENSMUST00000198847 | 76 nt | BASIC | -0.88 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | AC153512.4-201 | ENSMUST00000217783 | 426 nt | TSL 3 BASIC | -0.88 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | AC125190.3-201 | ENSMUST00000223224 | 121 nt | BASIC | -0.88 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | mt-Tc-201 | ENSMUST00000082400 | 66 nt | BASIC | -0.88 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm14327-202 | ENSMUST00000108935 | 1451 nt | APPRIS P1 TSL 1 (best) BASIC | -0.88 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm24276-201 | ENSMUST00000102181 | 110 nt | BASIC | -0.89 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Mir759-201 | ENSMUST00000103254 | 98 nt | BASIC | -0.89 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm22489-201 | ENSMUST00000116813 | 62 nt | BASIC | -0.89 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm24438-201 | ENSMUST00000157893 | 115 nt | BASIC | -0.89 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm25771-201 | ENSMUST00000158565 | 144 nt | BASIC | -0.89 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Mir669m-1-201 | ENSMUST00000158945 | 98 nt | BASIC | -0.89 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | CT030166.3-201 | ENSMUST00000223203 | 193 nt | BASIC | -0.89 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | AC132918.1-201 | ENSMUST00000227877 | 925 nt | BASIC | -0.89 | □□□□□ -2.55 | | |
| Cdkl1 | Q8CEQ0 | Gm23627-201 | ENSMUST00000082459 | 107 nt | BASIC | -0.89 | □□□□□ -2.55 | | |