Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm26018-201ENSMUST00000104406 128 ntBASIC1.18□□□□□ -2.22
Atg4aQ8C9S8 Gm23320-201ENSMUST00000104462 127 ntBASIC1.18□□□□□ -2.22
Atg4aQ8C9S8 Gm22373-201ENSMUST00000104584 89 ntBASIC1.18□□□□□ -2.22
Atg4aQ8C9S8 Gm25980-201ENSMUST00000157176 218 ntBASIC1.18□□□□□ -2.22
Atg4aQ8C9S8 Gm23760-201ENSMUST00000158350 116 ntBASIC1.18□□□□□ -2.22
Atg4aQ8C9S8 Gm25768-201ENSMUST00000158570 98 ntBASIC1.18□□□□□ -2.22
Atg4aQ8C9S8 Snora24-201ENSMUST00000174989 130 ntBASIC1.18□□□□□ -2.22
Atg4aQ8C9S8 Gm43898-201ENSMUST00000204456 424 ntBASIC1.18□□□□□ -2.22
Atg4aQ8C9S8 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC1.18□□□□□ -2.22
Atg4aQ8C9S8 AL627387.1-201ENSMUST00000226063 250 ntBASIC1.18□□□□□ -2.22
Atg4aQ8C9S8 Gm22999-201ENSMUST00000157082 88 ntBASIC1.17□□□□□ -2.22
Atg4aQ8C9S8 Gm24915-201ENSMUST00000157288 78 ntBASIC1.17□□□□□ -2.22
Atg4aQ8C9S8 Gm22074-201ENSMUST00000158595 113 ntBASIC1.17□□□□□ -2.22
Atg4aQ8C9S8 Gm7258-201ENSMUST00000179317 300 ntBASIC1.17□□□□□ -2.22
Atg4aQ8C9S8 Gm22105-201ENSMUST00000116734 116 ntBASIC1.16□□□□□ -2.22
Atg4aQ8C9S8 Gm14568-201ENSMUST00000119321 294 ntBASIC1.16□□□□□ -2.22
Atg4aQ8C9S8 Gm25044-201ENSMUST00000158603 104 ntBASIC1.16□□□□□ -2.22
Atg4aQ8C9S8 Gm22914-201ENSMUST00000175195 77 ntBASIC1.16□□□□□ -2.22
Atg4aQ8C9S8 Gm24154-201ENSMUST00000175261 130 ntBASIC1.16□□□□□ -2.22
Atg4aQ8C9S8 Gm23375-201ENSMUST00000175407 83 ntBASIC1.16□□□□□ -2.22
Atg4aQ8C9S8 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.16□□□□□ -2.22
Atg4aQ8C9S8 Gm27711-201ENSMUST00000183802 118 ntBASIC1.16□□□□□ -2.22
Atg4aQ8C9S8 Gm18665-201ENSMUST00000189783 270 ntBASIC1.16□□□□□ -2.22
Atg4aQ8C9S8 Mir3969-201ENSMUST00000197106 92 ntBASIC1.16□□□□□ -2.22
Atg4aQ8C9S8 Gm43911-201ENSMUST00000203097 76 ntBASIC1.16□□□□□ -2.22
Atg4aQ8C9S8 AC165138.1-201ENSMUST00000226984 270 ntBASIC1.16□□□□□ -2.22
Atg4aQ8C9S8 Mir196b-201ENSMUST00000083509 85 ntBASIC1.16□□□□□ -2.22
Atg4aQ8C9S8 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Atg4aQ8C9S8 Gm24250-201ENSMUST00000157320 135 ntBASIC1.15□□□□□ -2.23
Atg4aQ8C9S8 Gm17528-201ENSMUST00000171026 239 ntBASIC1.15□□□□□ -2.23
Atg4aQ8C9S8 Gm25241-201ENSMUST00000174909 84 ntBASIC1.15□□□□□ -2.23
Atg4aQ8C9S8 Gm26217-201ENSMUST00000175212 84 ntBASIC1.15□□□□□ -2.23
Atg4aQ8C9S8 Gm23770-201ENSMUST00000178009 108 ntBASIC1.15□□□□□ -2.23
Atg4aQ8C9S8 Gm22832-201ENSMUST00000178022 108 ntBASIC1.15□□□□□ -2.23
Atg4aQ8C9S8 Gm23863-201ENSMUST00000178265 108 ntBASIC1.15□□□□□ -2.23
Atg4aQ8C9S8 Gm24828-201ENSMUST00000178507 108 ntBASIC1.15□□□□□ -2.23
Atg4aQ8C9S8 Gm23052-201ENSMUST00000178633 108 ntBASIC1.15□□□□□ -2.23
Atg4aQ8C9S8 Gm25729-201ENSMUST00000179050 108 ntBASIC1.15□□□□□ -2.23
Atg4aQ8C9S8 Gm23714-201ENSMUST00000179259 105 ntBASIC1.15□□□□□ -2.23
Atg4aQ8C9S8 Gm25359-201ENSMUST00000179315 108 ntBASIC1.15□□□□□ -2.23
Atg4aQ8C9S8 Gm22624-201ENSMUST00000179913 108 ntBASIC1.15□□□□□ -2.23
Atg4aQ8C9S8 Mir8119-201ENSMUST00000183371 129 ntBASIC1.15□□□□□ -2.23
Atg4aQ8C9S8 Gm27365-201ENSMUST00000184041 177 ntBASIC1.15□□□□□ -2.23
Atg4aQ8C9S8 Gm44320-201ENSMUST00000199276 86 ntBASIC1.15□□□□□ -2.23
Atg4aQ8C9S8 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Atg4aQ8C9S8 Gm20734-201ENSMUST00000216939 193 ntBASIC1.15□□□□□ -2.23
Atg4aQ8C9S8 Gm18502-201ENSMUST00000218679 199 ntBASIC1.15□□□□□ -2.23
Atg4aQ8C9S8 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.15□□□□□ -2.23
Atg4aQ8C9S8 Gm8508-201ENSMUST00000061226 363 ntBASIC1.15□□□□□ -2.23
Atg4aQ8C9S8 Gm25081-201ENSMUST00000082534 108 ntBASIC1.15□□□□□ -2.23
Atg4aQ8C9S8 Gm23947-201ENSMUST00000093636 107 ntBASIC1.15□□□□□ -2.23
Atg4aQ8C9S8 Gm14502-201ENSMUST00000118154 113 ntBASIC1.14□□□□□ -2.23
Atg4aQ8C9S8 Gm25715-201ENSMUST00000158627 125 ntBASIC1.14□□□□□ -2.23
Atg4aQ8C9S8 Gm16399-201ENSMUST00000181423 219 ntBASIC1.14□□□□□ -2.23
Atg4aQ8C9S8 Gm37545-201ENSMUST00000186512 148 ntBASIC1.14□□□□□ -2.23
Atg4aQ8C9S8 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.14□□□□□ -2.23
Atg4aQ8C9S8 Gm44396-201ENSMUST00000199843 114 ntBASIC1.14□□□□□ -2.23
Atg4aQ8C9S8 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC1.14□□□□□ -2.23
Atg4aQ8C9S8 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC1.14□□□□□ -2.23
Atg4aQ8C9S8 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.14□□□□□ -2.23
Atg4aQ8C9S8 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC1.14□□□□□ -2.23
Atg4aQ8C9S8 AC168880.2-201ENSMUST00000224488 201 ntBASIC1.14□□□□□ -2.23
Atg4aQ8C9S8 Snord90-201ENSMUST00000104568 111 ntBASIC1.13□□□□□ -2.23
Atg4aQ8C9S8 Gm22079-201ENSMUST00000157592 106 ntBASIC1.13□□□□□ -2.23
Atg4aQ8C9S8 Gm26412-201ENSMUST00000157666 55 ntBASIC1.13□□□□□ -2.23
Atg4aQ8C9S8 Gm23763-201ENSMUST00000158345 60 ntBASIC1.13□□□□□ -2.23
Atg4aQ8C9S8 Gm23859-201ENSMUST00000158383 64 ntBASIC1.13□□□□□ -2.23
Atg4aQ8C9S8 Gm25011-201ENSMUST00000158398 126 ntBASIC1.13□□□□□ -2.23
Atg4aQ8C9S8 Gm22663-201ENSMUST00000158721 102 ntBASIC1.13□□□□□ -2.23
Atg4aQ8C9S8 AC151902.2-201ENSMUST00000226419 301 ntBASIC1.13□□□□□ -2.23
Atg4aQ8C9S8 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.13□□□□□ -2.23
Atg4aQ8C9S8 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Atg4aQ8C9S8 Mir7663-201ENSMUST00000183950 61 ntBASIC1.12□□□□□ -2.23
Atg4aQ8C9S8 Gm27894-201ENSMUST00000184177 92 ntBASIC1.12□□□□□ -2.23
Atg4aQ8C9S8 Gm18213-201ENSMUST00000207850 178 ntBASIC1.12□□□□□ -2.23
Atg4aQ8C9S8 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.12□□□□□ -2.23
Atg4aQ8C9S8 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.12□□□□□ -2.23
Atg4aQ8C9S8 Mir19b-2-201ENSMUST00000083539 84 ntBASIC1.12□□□□□ -2.23
Atg4aQ8C9S8 Gm22336-201ENSMUST00000157719 107 ntBASIC1.11□□□□□ -2.23
Atg4aQ8C9S8 Gm24001-201ENSMUST00000158463 85 ntBASIC1.11□□□□□ -2.23
Atg4aQ8C9S8 Gm23339-201ENSMUST00000158962 139 ntBASIC1.11□□□□□ -2.23
Atg4aQ8C9S8 Mir6928-201ENSMUST00000185166 70 ntBASIC1.11□□□□□ -2.23
Atg4aQ8C9S8 Gm23245-201ENSMUST00000083370 135 ntBASIC1.11□□□□□ -2.23
Atg4aQ8C9S8 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.11□□□□□ -2.23
Atg4aQ8C9S8 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Atg4aQ8C9S8 Gm25611-201ENSMUST00000104017 133 ntBASIC1.1□□□□□ -2.23
Atg4aQ8C9S8 Gm24263-201ENSMUST00000104059 107 ntBASIC1.1□□□□□ -2.23
Atg4aQ8C9S8 Gm22332-201ENSMUST00000158072 126 ntBASIC1.1□□□□□ -2.23
Atg4aQ8C9S8 Gm22944-201ENSMUST00000158662 133 ntBASIC1.1□□□□□ -2.23
Atg4aQ8C9S8 Gm27792-201ENSMUST00000184031 115 ntBASIC1.1□□□□□ -2.23
Atg4aQ8C9S8 Gm23303-201ENSMUST00000082714 152 ntBASIC1.1□□□□□ -2.23
Atg4aQ8C9S8 Gm26123-201ENSMUST00000083363 135 ntBASIC1.1□□□□□ -2.23
Atg4aQ8C9S8 Mir411-201ENSMUST00000083543 82 ntBASIC1.1□□□□□ -2.23
Atg4aQ8C9S8 Gm10172-201ENSMUST00000085929 558 ntBASIC1.1□□□□□ -2.23
Atg4aQ8C9S8 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Atg4aQ8C9S8 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Atg4aQ8C9S8 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.09□□□□□ -2.23
Atg4aQ8C9S8 Mir547-201ENSMUST00000102051 78 ntBASIC1.09□□□□□ -2.23
Atg4aQ8C9S8 Mir669b-201ENSMUST00000102172 97 ntBASIC1.09□□□□□ -2.23
Atg4aQ8C9S8 Gm11644-201ENSMUST00000119735 150 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms