Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Gm16561-201ENSMUST00000163001 192 ntBASIC1.97□□□□□ -2.09
Ube3dQ8BX13 Gm26498-201ENSMUST00000177799 79 ntBASIC1.97□□□□□ -2.09
Ube3dQ8BX13 Gm26230-201ENSMUST00000180141 79 ntBASIC1.97□□□□□ -2.09
Ube3dQ8BX13 Mir7014-201ENSMUST00000183853 63 ntBASIC1.97□□□□□ -2.09
Ube3dQ8BX13 Mir497-201ENSMUST00000200557 84 ntBASIC1.97□□□□□ -2.09
Ube3dQ8BX13 Gm45429-201ENSMUST00000209527 172 ntBASIC1.97□□□□□ -2.09
Ube3dQ8BX13 Snord14a-201ENSMUST00000082807 87 ntBASIC1.97□□□□□ -2.09
Ube3dQ8BX13 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
Ube3dQ8BX13 Gm14674-201ENSMUST00000117816 342 ntBASIC1.96□□□□□ -2.1
Ube3dQ8BX13 Gm15692-201ENSMUST00000152173 352 ntBASIC1.96□□□□□ -2.1
Ube3dQ8BX13 Gm25423-201ENSMUST00000157609 107 ntBASIC1.96□□□□□ -2.1
Ube3dQ8BX13 Gm24900-201ENSMUST00000158128 134 ntBASIC1.96□□□□□ -2.1
Ube3dQ8BX13 Gm22425-201ENSMUST00000158532 138 ntBASIC1.96□□□□□ -2.1
Ube3dQ8BX13 Gm25044-201ENSMUST00000158603 104 ntBASIC1.96□□□□□ -2.1
Ube3dQ8BX13 Gm5900-201ENSMUST00000179862 375 ntBASIC1.96□□□□□ -2.1
Ube3dQ8BX13 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.96□□□□□ -2.1
Ube3dQ8BX13 Gm23299-201ENSMUST00000082708 79 ntBASIC1.96□□□□□ -2.1
Ube3dQ8BX13 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.96□□□□□ -2.1
Ube3dQ8BX13 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Ube3dQ8BX13 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Ube3dQ8BX13 Gm25611-201ENSMUST00000104017 133 ntBASIC1.95□□□□□ -2.1
Ube3dQ8BX13 Mir654-201ENSMUST00000104787 84 ntBASIC1.95□□□□□ -2.1
Ube3dQ8BX13 Gm24937-201ENSMUST00000122597 134 ntBASIC1.95□□□□□ -2.1
Ube3dQ8BX13 Gm22490-201ENSMUST00000157188 119 ntBASIC1.95□□□□□ -2.1
Ube3dQ8BX13 Gm25838-201ENSMUST00000158920 120 ntBASIC1.95□□□□□ -2.1
Ube3dQ8BX13 Gm16539-201ENSMUST00000160086 327 ntBASIC1.95□□□□□ -2.1
Ube3dQ8BX13 Gm22403-201ENSMUST00000174919 84 ntBASIC1.95□□□□□ -2.1
Ube3dQ8BX13 Gm25380-201ENSMUST00000175463 107 ntBASIC1.95□□□□□ -2.1
Ube3dQ8BX13 Gm24572-201ENSMUST00000175505 88 ntBASIC1.95□□□□□ -2.1
Ube3dQ8BX13 Gm24641-201ENSMUST00000178055 107 ntBASIC1.95□□□□□ -2.1
Ube3dQ8BX13 Gm25484-201ENSMUST00000178217 107 ntBASIC1.95□□□□□ -2.1
Ube3dQ8BX13 Gm21885-201ENSMUST00000178891 327 ntBASIC1.95□□□□□ -2.1
Ube3dQ8BX13 Gm26138-201ENSMUST00000179236 107 ntBASIC1.95□□□□□ -2.1
Ube3dQ8BX13 Gm22821-201ENSMUST00000179288 107 ntBASIC1.95□□□□□ -2.1
Ube3dQ8BX13 Mir6379-201ENSMUST00000183392 115 ntBASIC1.95□□□□□ -2.1
Ube3dQ8BX13 Gm43324-201ENSMUST00000197482 289 ntBASIC1.95□□□□□ -2.1
Ube3dQ8BX13 Gm23140-201ENSMUST00000082487 107 ntBASIC1.95□□□□□ -2.1
Ube3dQ8BX13 Gm23298-201ENSMUST00000083181 107 ntBASIC1.95□□□□□ -2.1
Ube3dQ8BX13 Gm24614-201ENSMUST00000083269 107 ntBASIC1.95□□□□□ -2.1
Ube3dQ8BX13 Gm22057-201ENSMUST00000083387 107 ntBASIC1.95□□□□□ -2.1
Ube3dQ8BX13 Gm25516-201ENSMUST00000083857 107 ntBASIC1.95□□□□□ -2.1
Ube3dQ8BX13 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Ube3dQ8BX13 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Ube3dQ8BX13 Mir344e-201ENSMUST00000104677 66 ntBASIC1.94□□□□□ -2.1
Ube3dQ8BX13 Gm16328-201ENSMUST00000126985 196 ntBASIC1.94□□□□□ -2.1
Ube3dQ8BX13 Gm23170-201ENSMUST00000157158 106 ntBASIC1.94□□□□□ -2.1
Ube3dQ8BX13 Mir3061-201ENSMUST00000175129 91 ntBASIC1.94□□□□□ -2.1
Ube3dQ8BX13 Gm25035-201ENSMUST00000175414 77 ntBASIC1.94□□□□□ -2.1
Ube3dQ8BX13 Mir7118-201ENSMUST00000197760 61 ntBASIC1.94□□□□□ -2.1
Ube3dQ8BX13 Mir7217-201ENSMUST00000200304 62 ntBASIC1.94□□□□□ -2.1
Ube3dQ8BX13 AC124687.1-201ENSMUST00000221868 189 ntBASIC1.94□□□□□ -2.1
Ube3dQ8BX13 Snora69-201ENSMUST00000083708 131 ntBASIC1.94□□□□□ -2.1
Ube3dQ8BX13 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Ube3dQ8BX13 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
Ube3dQ8BX13 Gm25485-201ENSMUST00000104120 132 ntBASIC1.93□□□□□ -2.1
Ube3dQ8BX13 Gm23654-201ENSMUST00000116758 126 ntBASIC1.93□□□□□ -2.1
Ube3dQ8BX13 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.93□□□□□ -2.1
Ube3dQ8BX13 Gm24229-201ENSMUST00000158830 118 ntBASIC1.93□□□□□ -2.1
Ube3dQ8BX13 Gm16550-201ENSMUST00000162550 126 ntBASIC1.93□□□□□ -2.1
Ube3dQ8BX13 Gm22638-201ENSMUST00000179674 107 ntBASIC1.93□□□□□ -2.1
Ube3dQ8BX13 Gm44807-201ENSMUST00000206115 154 ntBASIC1.93□□□□□ -2.1
Ube3dQ8BX13 Gm25038-201ENSMUST00000082928 130 ntBASIC1.93□□□□□ -2.1
Ube3dQ8BX13 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.93□□□□□ -2.1
Ube3dQ8BX13 Gm25678-201ENSMUST00000174984 73 ntBASIC1.92□□□□□ -2.1
Ube3dQ8BX13 Gm27959-201ENSMUST00000185172 111 ntBASIC1.92□□□□□ -2.1
Ube3dQ8BX13 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Ube3dQ8BX13 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
Ube3dQ8BX13 Gm22750-201ENSMUST00000102076 103 ntBASIC1.91□□□□□ -2.1
Ube3dQ8BX13 Gm22200-201ENSMUST00000158614 67 ntBASIC1.91□□□□□ -2.1
Ube3dQ8BX13 Gm25978-201ENSMUST00000158698 90 ntBASIC1.91□□□□□ -2.1
Ube3dQ8BX13 Mir223-201ENSMUST00000102112 110 ntBASIC1.9□□□□□ -2.11
Ube3dQ8BX13 Mir669d-201ENSMUST00000104644 121 ntBASIC1.9□□□□□ -2.11
Ube3dQ8BX13 Gm22802-201ENSMUST00000175621 89 ntBASIC1.9□□□□□ -2.11
Ube3dQ8BX13 Gm22264-201ENSMUST00000178200 107 ntBASIC1.9□□□□□ -2.11
Ube3dQ8BX13 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ube3dQ8BX13 Gm25094-201ENSMUST00000103992 131 ntBASIC1.89□□□□□ -2.11
Ube3dQ8BX13 Gm22031-201ENSMUST00000116945 126 ntBASIC1.89□□□□□ -2.11
Ube3dQ8BX13 Gm12941-201ENSMUST00000117934 220 ntBASIC1.89□□□□□ -2.11
Ube3dQ8BX13 Gm13433-201ENSMUST00000121701 240 ntBASIC1.89□□□□□ -2.11
Ube3dQ8BX13 Gm22159-201ENSMUST00000158412 130 ntBASIC1.89□□□□□ -2.11
Ube3dQ8BX13 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.89□□□□□ -2.11
Ube3dQ8BX13 Traj61-201ENSMUST00000165025 72 ntBASIC1.89□□□□□ -2.11
Ube3dQ8BX13 Snora24-201ENSMUST00000174989 130 ntBASIC1.89□□□□□ -2.11
Ube3dQ8BX13 Gm28270-201ENSMUST00000188550 109 ntBASIC1.89□□□□□ -2.11
Ube3dQ8BX13 Gm28328-201ENSMUST00000188869 109 ntBASIC1.89□□□□□ -2.11
Ube3dQ8BX13 Gm28256-201ENSMUST00000188953 139 ntBASIC1.89□□□□□ -2.11
Ube3dQ8BX13 Gm28559-201ENSMUST00000190532 139 ntBASIC1.89□□□□□ -2.11
Ube3dQ8BX13 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.89□□□□□ -2.11
Ube3dQ8BX13 Mir30d-201ENSMUST00000083503 82 ntBASIC1.89□□□□□ -2.11
Ube3dQ8BX13 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Ube3dQ8BX13 Mir544-201ENSMUST00000103813 78 ntBASIC1.88□□□□□ -2.11
Ube3dQ8BX13 Gm22914-201ENSMUST00000175195 77 ntBASIC1.88□□□□□ -2.11
Ube3dQ8BX13 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Ube3dQ8BX13 Snora2b-201ENSMUST00000084005 137 ntBASIC1.88□□□□□ -2.11
Ube3dQ8BX13 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Ube3dQ8BX13 Gm22004-201ENSMUST00000101884 107 ntBASIC1.87□□□□□ -2.11
Ube3dQ8BX13 Gm24468-201ENSMUST00000104489 104 ntBASIC1.87□□□□□ -2.11
Ube3dQ8BX13 Gm22011-201ENSMUST00000158790 123 ntBASIC1.87□□□□□ -2.11
Ube3dQ8BX13 Gm22093-201ENSMUST00000158980 111 ntBASIC1.87□□□□□ -2.11
Ube3dQ8BX13 Gm23813-201ENSMUST00000175153 77 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 137.5 ms