Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm25703-201ENSMUST00000083123 151 ntBASIC0□□□□□ -2.41
Ccdc40Q8BI79 Gm24278-201ENSMUST00000104239 127 ntBASIC-0.01□□□□□ -2.41
Ccdc40Q8BI79 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-0.01□□□□□ -2.41
Ccdc40Q8BI79 Gm24765-201ENSMUST00000083691 103 ntBASIC-0.01□□□□□ -2.41
Ccdc40Q8BI79 Gm26293-201ENSMUST00000104170 84 ntBASIC-0.02□□□□□ -2.41
Ccdc40Q8BI79 Gm14567-201ENSMUST00000117155 174 ntBASIC-0.02□□□□□ -2.41
Ccdc40Q8BI79 Gm13345-201ENSMUST00000121928 228 ntBASIC-0.02□□□□□ -2.41
Ccdc40Q8BI79 Gm24594-201ENSMUST00000122502 99 ntBASIC-0.02□□□□□ -2.41
Ccdc40Q8BI79 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.02□□□□□ -2.41
Ccdc40Q8BI79 Gm28001-201ENSMUST00000183561 117 ntBASIC-0.02□□□□□ -2.41
Ccdc40Q8BI79 Gm43505-201ENSMUST00000200579 139 ntBASIC-0.02□□□□□ -2.41
Ccdc40Q8BI79 Mir200b-201ENSMUST00000083615 70 ntBASIC-0.02□□□□□ -2.41
Ccdc40Q8BI79 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.03□□□□□ -2.41
Ccdc40Q8BI79 Gm14039-201ENSMUST00000118705 101 ntBASIC-0.03□□□□□ -2.41
Ccdc40Q8BI79 Gm25267-201ENSMUST00000158522 63 ntBASIC-0.03□□□□□ -2.41
Ccdc40Q8BI79 Gm25633-201ENSMUST00000178565 107 ntBASIC-0.03□□□□□ -2.41
Ccdc40Q8BI79 Mir721-201ENSMUST00000200230 88 ntBASIC-0.03□□□□□ -2.41
Ccdc40Q8BI79 Gm19790-201ENSMUST00000214414 251 ntBASIC-0.03□□□□□ -2.41
Ccdc40Q8BI79 Gm22571-201ENSMUST00000082984 70 ntBASIC-0.03□□□□□ -2.41
Ccdc40Q8BI79 Snord100-201ENSMUST00000116836 74 ntBASIC-0.04□□□□□ -2.42
Ccdc40Q8BI79 Gm23466-201ENSMUST00000157133 106 ntBASIC-0.04□□□□□ -2.42
Ccdc40Q8BI79 AC211878.4-201ENSMUST00000220970 262 ntBASIC-0.04□□□□□ -2.42
Ccdc40Q8BI79 Gm11322-201ENSMUST00000118095 435 ntBASIC-0.05□□□□□ -2.42
Ccdc40Q8BI79 Gm25364-201ENSMUST00000158851 107 ntBASIC-0.05□□□□□ -2.42
Ccdc40Q8BI79 Gm38364-201ENSMUST00000191814 179 ntBASIC-0.05□□□□□ -2.42
Ccdc40Q8BI79 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.05□□□□□ -2.42
Ccdc40Q8BI79 AC136457.1-201ENSMUST00000224195 156 ntBASIC-0.05□□□□□ -2.42
Ccdc40Q8BI79 AC154213.2-201ENSMUST00000227138 187 ntBASIC-0.05□□□□□ -2.42
Ccdc40Q8BI79 Mir196a-2-201ENSMUST00000083554 85 ntBASIC-0.05□□□□□ -2.42
Ccdc40Q8BI79 Mir670-201ENSMUST00000102380 100 ntBASIC-0.06□□□□□ -2.42
Ccdc40Q8BI79 Gm17919-201ENSMUST00000173344 312 ntBASIC-0.06□□□□□ -2.42
Ccdc40Q8BI79 Gm22242-201ENSMUST00000175224 118 ntBASIC-0.06□□□□□ -2.42
Ccdc40Q8BI79 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-0.06□□□□□ -2.42
Ccdc40Q8BI79 Gm24321-201ENSMUST00000175348 80 ntBASIC-0.07□□□□□ -2.42
Ccdc40Q8BI79 Mir3105-201ENSMUST00000175480 85 ntBASIC-0.07□□□□□ -2.42
Ccdc40Q8BI79 Gm24929-201ENSMUST00000083403 139 ntBASIC-0.07□□□□□ -2.42
Ccdc40Q8BI79 Mir411-201ENSMUST00000083543 82 ntBASIC-0.07□□□□□ -2.42
Ccdc40Q8BI79 Mir218-1-201ENSMUST00000083669 110 ntBASIC-0.07□□□□□ -2.42
Ccdc40Q8BI79 Gm24764-201ENSMUST00000083686 199 ntBASIC-0.07□□□□□ -2.42
Ccdc40Q8BI79 Gm22491-201ENSMUST00000157190 102 ntBASIC-0.08□□□□□ -2.42
Ccdc40Q8BI79 Gm24772-201ENSMUST00000158507 110 ntBASIC-0.08□□□□□ -2.42
Ccdc40Q8BI79 Gm24488-201ENSMUST00000179934 127 ntBASIC-0.08□□□□□ -2.42
Ccdc40Q8BI79 Gm25701-201ENSMUST00000179988 127 ntBASIC-0.08□□□□□ -2.42
Ccdc40Q8BI79 Gm26431-201ENSMUST00000180199 127 ntBASIC-0.08□□□□□ -2.42
Ccdc40Q8BI79 Mir7039-201ENSMUST00000183852 85 ntBASIC-0.08□□□□□ -2.42
Ccdc40Q8BI79 Gm27980-201ENSMUST00000184094 169 ntBASIC-0.08□□□□□ -2.42
Ccdc40Q8BI79 Gm44345-201ENSMUST00000199560 135 ntBASIC-0.08□□□□□ -2.42
Ccdc40Q8BI79 Gm23060-201ENSMUST00000102345 109 ntBASIC-0.09□□□□□ -2.42
Ccdc40Q8BI79 Gm24867-201ENSMUST00000104161 107 ntBASIC-0.09□□□□□ -2.42
Ccdc40Q8BI79 Gm22216-201ENSMUST00000157557 114 ntBASIC-0.09□□□□□ -2.42
Ccdc40Q8BI79 Gm22836-201ENSMUST00000158441 61 ntBASIC-0.09□□□□□ -2.42
Ccdc40Q8BI79 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.09□□□□□ -2.42
Ccdc40Q8BI79 Gm24460-201ENSMUST00000082731 106 ntBASIC-0.09□□□□□ -2.42
Ccdc40Q8BI79 Gm25894-201ENSMUST00000083458 75 ntBASIC-0.09□□□□□ -2.42
Ccdc40Q8BI79 Mir377-201ENSMUST00000083504 68 ntBASIC-0.09□□□□□ -2.42
Ccdc40Q8BI79 Gm24555-201ENSMUST00000104548 124 ntBASIC-0.1□□□□□ -2.43
Ccdc40Q8BI79 Gm11420-201ENSMUST00000120047 402 ntBASIC-0.1□□□□□ -2.43
Ccdc40Q8BI79 Gm11388-201ENSMUST00000120908 159 ntBASIC-0.1□□□□□ -2.43
Ccdc40Q8BI79 Gm28016-201ENSMUST00000184594 196 ntBASIC-0.1□□□□□ -2.43
Ccdc40Q8BI79 Mir6896-201ENSMUST00000198033 73 ntBASIC-0.1□□□□□ -2.43
Ccdc40Q8BI79 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC-0.1□□□□□ -2.43
Ccdc40Q8BI79 Gm10172-201ENSMUST00000085929 558 ntBASIC-0.1□□□□□ -2.43
Ccdc40Q8BI79 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.11□□□□□ -2.43
Ccdc40Q8BI79 Scarna9-201ENSMUST00000104318 70 ntBASIC-0.11□□□□□ -2.43
Ccdc40Q8BI79 Gm26158-201ENSMUST00000158973 119 ntBASIC-0.11□□□□□ -2.43
Ccdc40Q8BI79 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
Ccdc40Q8BI79 Mir7079-201ENSMUST00000184697 69 ntBASIC-0.12□□□□□ -2.43
Ccdc40Q8BI79 Snord60-201ENSMUST00000082834 78 ntBASIC-0.12□□□□□ -2.43
Ccdc40Q8BI79 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-0.12□□□□□ -2.43
Ccdc40Q8BI79 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.13□□□□□ -2.43
Ccdc40Q8BI79 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.13□□□□□ -2.43
Ccdc40Q8BI79 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.13□□□□□ -2.43
Ccdc40Q8BI79 Gm23783-201ENSMUST00000157941 102 ntBASIC-0.13□□□□□ -2.43
Ccdc40Q8BI79 Gm29107-201ENSMUST00000190910 347 ntBASIC-0.13□□□□□ -2.43
Ccdc40Q8BI79 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.13□□□□□ -2.43
Ccdc40Q8BI79 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.13□□□□□ -2.43
Ccdc40Q8BI79 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.13□□□□□ -2.43
Ccdc40Q8BI79 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
Ccdc40Q8BI79 Mir382-201ENSMUST00000083494 76 ntBASIC-0.13□□□□□ -2.43
Ccdc40Q8BI79 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.13□□□□□ -2.43
Ccdc40Q8BI79 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
Ccdc40Q8BI79 Gm23531-201ENSMUST00000104567 68 ntBASIC-0.14□□□□□ -2.43
Ccdc40Q8BI79 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.14□□□□□ -2.43
Ccdc40Q8BI79 Gm25769-201ENSMUST00000158569 127 ntBASIC-0.14□□□□□ -2.43
Ccdc40Q8BI79 Gm26160-201ENSMUST00000158965 63 ntBASIC-0.14□□□□□ -2.43
Ccdc40Q8BI79 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.14□□□□□ -2.43
Ccdc40Q8BI79 Mir6905-201ENSMUST00000184228 70 ntBASIC-0.14□□□□□ -2.43
Ccdc40Q8BI79 Gm22358-201ENSMUST00000082877 122 ntBASIC-0.14□□□□□ -2.43
Ccdc40Q8BI79 Gm25188-201ENSMUST00000083913 122 ntBASIC-0.14□□□□□ -2.43
Ccdc40Q8BI79 Gm22479-201ENSMUST00000122566 81 ntBASIC-0.15□□□□□ -2.43
Ccdc40Q8BI79 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.15□□□□□ -2.43
Ccdc40Q8BI79 Gm25464-201ENSMUST00000175481 107 ntBASIC-0.15□□□□□ -2.43
Ccdc40Q8BI79 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.15□□□□□ -2.43
Ccdc40Q8BI79 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.15□□□□□ -2.43
Ccdc40Q8BI79 Mir30f-201ENSMUST00000196073 92 ntBASIC-0.15□□□□□ -2.43
Ccdc40Q8BI79 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.15□□□□□ -2.43
Ccdc40Q8BI79 Gm24250-201ENSMUST00000157320 135 ntBASIC-0.16□□□□□ -2.44
Ccdc40Q8BI79 Gm23770-201ENSMUST00000178009 108 ntBASIC-0.16□□□□□ -2.44
Ccdc40Q8BI79 Gm22832-201ENSMUST00000178022 108 ntBASIC-0.16□□□□□ -2.44
Ccdc40Q8BI79 Gm23863-201ENSMUST00000178265 108 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 351.1 ms