Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm24460-201ENSMUST00000082731 106 ntBASIC-0.16□□□□□ -2.44
Clrn3Q8BHH8 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.16□□□□□ -2.44
Clrn3Q8BHH8 Gm13345-201ENSMUST00000121928 228 ntBASIC-0.17□□□□□ -2.44
Clrn3Q8BHH8 Gm23036-201ENSMUST00000157885 99 ntBASIC-0.17□□□□□ -2.44
Clrn3Q8BHH8 Gm23994-201ENSMUST00000158059 88 ntBASIC-0.17□□□□□ -2.44
Clrn3Q8BHH8 Gm23219-201ENSMUST00000158123 87 ntBASIC-0.17□□□□□ -2.44
Clrn3Q8BHH8 Gm24392-201ENSMUST00000158136 103 ntBASIC-0.17□□□□□ -2.44
Clrn3Q8BHH8 Gm25161-201ENSMUST00000158913 132 ntBASIC-0.17□□□□□ -2.44
Clrn3Q8BHH8 Gm24667-201ENSMUST00000158938 103 ntBASIC-0.17□□□□□ -2.44
Clrn3Q8BHH8 Gm28418-201ENSMUST00000186179 423 ntBASIC-0.17□□□□□ -2.44
Clrn3Q8BHH8 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC-0.17□□□□□ -2.44
Clrn3Q8BHH8 CT030645.1-201ENSMUST00000224020 231 ntBASIC-0.17□□□□□ -2.44
Clrn3Q8BHH8 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.17□□□□□ -2.44
Clrn3Q8BHH8 Gm25894-201ENSMUST00000083458 75 ntBASIC-0.17□□□□□ -2.44
Clrn3Q8BHH8 Gm23347-201ENSMUST00000083823 82 ntBASIC-0.17□□□□□ -2.44
Clrn3Q8BHH8 Gm11204-201ENSMUST00000122438 147 ntBASIC-0.18□□□□□ -2.44
Clrn3Q8BHH8 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.18□□□□□ -2.44
Clrn3Q8BHH8 Gm25771-201ENSMUST00000158565 144 ntBASIC-0.18□□□□□ -2.44
Clrn3Q8BHH8 Gm38109-201ENSMUST00000195386 181 ntBASIC-0.18□□□□□ -2.44
Clrn3Q8BHH8 Gm16550-201ENSMUST00000162550 126 ntBASIC-0.19□□□□□ -2.44
Clrn3Q8BHH8 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC-0.19□□□□□ -2.44
Clrn3Q8BHH8 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.19□□□□□ -2.44
Clrn3Q8BHH8 Mir7227-201ENSMUST00000200408 59 ntBASIC-0.19□□□□□ -2.44
Clrn3Q8BHH8 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.19□□□□□ -2.44
Clrn3Q8BHH8 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.19□□□□□ -2.44
Clrn3Q8BHH8 Gm23140-201ENSMUST00000082487 107 ntBASIC-0.19□□□□□ -2.44
Clrn3Q8BHH8 Snord60-201ENSMUST00000082834 78 ntBASIC-0.19□□□□□ -2.44
Clrn3Q8BHH8 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.19□□□□□ -2.44
Clrn3Q8BHH8 Gm22784-201ENSMUST00000104088 132 ntBASIC-0.2□□□□□ -2.44
Clrn3Q8BHH8 Gm25848-201ENSMUST00000116790 144 ntBASIC-0.2□□□□□ -2.44
Clrn3Q8BHH8 Gm22032-201ENSMUST00000116946 116 ntBASIC-0.2□□□□□ -2.44
Clrn3Q8BHH8 Gm26194-201ENSMUST00000175036 71 ntBASIC-0.2□□□□□ -2.44
Clrn3Q8BHH8 Gm44490-201ENSMUST00000198566 127 ntBASIC-0.2□□□□□ -2.44
Clrn3Q8BHH8 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-0.2□□□□□ -2.44
Clrn3Q8BHH8 Gm10222-201ENSMUST00000088336 294 ntBASIC-0.2□□□□□ -2.44
Clrn3Q8BHH8 Gm23941-201ENSMUST00000101953 107 ntBASIC-0.21□□□□□ -2.44
Clrn3Q8BHH8 Mir672-201ENSMUST00000102331 100 ntBASIC-0.21□□□□□ -2.44
Clrn3Q8BHH8 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.21□□□□□ -2.44
Clrn3Q8BHH8 Gm15030-201ENSMUST00000119804 484 ntBASIC-0.21□□□□□ -2.44
Clrn3Q8BHH8 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.21□□□□□ -2.44
Clrn3Q8BHH8 Gm23278-201ENSMUST00000157911 143 ntBASIC-0.21□□□□□ -2.44
Clrn3Q8BHH8 Gm23180-201ENSMUST00000158686 125 ntBASIC-0.21□□□□□ -2.44
Clrn3Q8BHH8 Gm26158-201ENSMUST00000158973 119 ntBASIC-0.21□□□□□ -2.44
Clrn3Q8BHH8 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.21□□□□□ -2.44
Clrn3Q8BHH8 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.21□□□□□ -2.44
Clrn3Q8BHH8 Gm42594-201ENSMUST00000199511 246 ntBASIC-0.21□□□□□ -2.44
Clrn3Q8BHH8 Gm19790-201ENSMUST00000214414 251 ntBASIC-0.21□□□□□ -2.44
Clrn3Q8BHH8 AC154552.1-201ENSMUST00000222969 202 ntBASIC-0.21□□□□□ -2.44
Clrn3Q8BHH8 Snord85-201ENSMUST00000083262 73 ntBASIC-0.21□□□□□ -2.44
Clrn3Q8BHH8 Gm24423-201ENSMUST00000101982 106 ntBASIC-0.22□□□□□ -2.44
Clrn3Q8BHH8 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.22□□□□□ -2.44
Clrn3Q8BHH8 Mir669f-201ENSMUST00000103850 121 ntBASIC-0.22□□□□□ -2.44
Clrn3Q8BHH8 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.22□□□□□ -2.44
Clrn3Q8BHH8 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.22□□□□□ -2.44
Clrn3Q8BHH8 Gm25935-201ENSMUST00000178746 107 ntBASIC-0.22□□□□□ -2.44
Clrn3Q8BHH8 Gm24488-201ENSMUST00000179934 127 ntBASIC-0.22□□□□□ -2.44
Clrn3Q8BHH8 Gm25701-201ENSMUST00000179988 127 ntBASIC-0.22□□□□□ -2.44
Clrn3Q8BHH8 Gm26431-201ENSMUST00000180199 127 ntBASIC-0.22□□□□□ -2.44
Clrn3Q8BHH8 Gm27607-201ENSMUST00000185162 122 ntBASIC-0.22□□□□□ -2.44
Clrn3Q8BHH8 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.22□□□□□ -2.44
Clrn3Q8BHH8 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.22□□□□□ -2.44
Clrn3Q8BHH8 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.22□□□□□ -2.44
Clrn3Q8BHH8 Gm24445-201ENSMUST00000083981 107 ntBASIC-0.22□□□□□ -2.44
Clrn3Q8BHH8 Gm24594-201ENSMUST00000122502 99 ntBASIC-0.23□□□□□ -2.45
Clrn3Q8BHH8 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.23□□□□□ -2.45
Clrn3Q8BHH8 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.23□□□□□ -2.45
Clrn3Q8BHH8 Gm23186-201ENSMUST00000180078 107 ntBASIC-0.23□□□□□ -2.45
Clrn3Q8BHH8 Gm27521-201ENSMUST00000184022 64 ntBASIC-0.23□□□□□ -2.45
Clrn3Q8BHH8 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.23□□□□□ -2.45
Clrn3Q8BHH8 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.24□□□□□ -2.45
Clrn3Q8BHH8 Gm12797-201ENSMUST00000118645 273 ntBASIC-0.24□□□□□ -2.45
Clrn3Q8BHH8 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC-0.24□□□□□ -2.45
Clrn3Q8BHH8 Gm25267-201ENSMUST00000158522 63 ntBASIC-0.24□□□□□ -2.45
Clrn3Q8BHH8 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.24□□□□□ -2.45
Clrn3Q8BHH8 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.24□□□□□ -2.45
Clrn3Q8BHH8 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC-0.24□□□□□ -2.45
Clrn3Q8BHH8 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.24□□□□□ -2.45
Clrn3Q8BHH8 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.24□□□□□ -2.45
Clrn3Q8BHH8 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.24□□□□□ -2.45
Clrn3Q8BHH8 Mir181b-2-201ENSMUST00000083644 89 ntBASIC-0.24□□□□□ -2.45
Clrn3Q8BHH8 Mir218-1-201ENSMUST00000083669 110 ntBASIC-0.24□□□□□ -2.45
Clrn3Q8BHH8 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.24□□□□□ -2.45
Clrn3Q8BHH8 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-0.24□□□□□ -2.45
Clrn3Q8BHH8 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.25□□□□□ -2.45
Clrn3Q8BHH8 Gm24867-201ENSMUST00000104161 107 ntBASIC-0.25□□□□□ -2.45
Clrn3Q8BHH8 Gm23881-201ENSMUST00000116872 66 ntBASIC-0.25□□□□□ -2.45
Clrn3Q8BHH8 Gm14567-201ENSMUST00000117155 174 ntBASIC-0.25□□□□□ -2.45
Clrn3Q8BHH8 Gm14301-201ENSMUST00000120181 324 ntBASIC-0.25□□□□□ -2.45
Clrn3Q8BHH8 Gm25664-201ENSMUST00000157697 107 ntBASIC-0.25□□□□□ -2.45
Clrn3Q8BHH8 Gm25769-201ENSMUST00000158569 127 ntBASIC-0.25□□□□□ -2.45
Clrn3Q8BHH8 Gm25364-201ENSMUST00000158851 107 ntBASIC-0.25□□□□□ -2.45
Clrn3Q8BHH8 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.25□□□□□ -2.45
Clrn3Q8BHH8 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-0.26□□□□□ -2.45
Clrn3Q8BHH8 Snord100-201ENSMUST00000116836 74 ntBASIC-0.26□□□□□ -2.45
Clrn3Q8BHH8 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.26□□□□□ -2.45
Clrn3Q8BHH8 Gm25235-201ENSMUST00000179933 107 ntBASIC-0.26□□□□□ -2.45
Clrn3Q8BHH8 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.26□□□□□ -2.45
Clrn3Q8BHH8 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.26□□□□□ -2.45
Clrn3Q8BHH8 Gm45313-201ENSMUST00000210584 178 ntBASIC-0.26□□□□□ -2.45
Clrn3Q8BHH8 AC192333.1-201ENSMUST00000224573 376 ntBASIC-0.26□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms