Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Mir759-201ENSMUST00000103254 98 ntBASIC-0.23□□□□□ -2.45
Rpap1Q80TE0 Gm24635-201ENSMUST00000122712 128 ntBASIC-0.23□□□□□ -2.45
Rpap1Q80TE0 Gm25828-201ENSMUST00000157087 95 ntBASIC-0.23□□□□□ -2.45
Rpap1Q80TE0 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.23□□□□□ -2.45
Rpap1Q80TE0 Gm28579-201ENSMUST00000186143 369 ntBASIC-0.23□□□□□ -2.45
Rpap1Q80TE0 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-0.23□□□□□ -2.45
Rpap1Q80TE0 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
Rpap1Q80TE0 Snord42a-201ENSMUST00000082606 65 ntBASIC-0.23□□□□□ -2.45
Rpap1Q80TE0 Mir377-201ENSMUST00000083504 68 ntBASIC-0.23□□□□□ -2.45
Rpap1Q80TE0 Gm23845-201ENSMUST00000083834 152 ntBASIC-0.23□□□□□ -2.45
Rpap1Q80TE0 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC-0.24□□□□□ -2.45
Rpap1Q80TE0 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.24□□□□□ -2.45
Rpap1Q80TE0 Gm27993-201ENSMUST00000184362 85 ntBASIC-0.24□□□□□ -2.45
Rpap1Q80TE0 Gm27997-201ENSMUST00000184942 69 ntBASIC-0.24□□□□□ -2.45
Rpap1Q80TE0 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.24□□□□□ -2.45
Rpap1Q80TE0 CT025603.4-201ENSMUST00000225777 413 ntBASIC-0.24□□□□□ -2.45
Rpap1Q80TE0 Gm10172-201ENSMUST00000085929 558 ntBASIC-0.24□□□□□ -2.45
Rpap1Q80TE0 Gm26011-201ENSMUST00000104410 104 ntBASIC-0.25□□□□□ -2.45
Rpap1Q80TE0 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC-0.25□□□□□ -2.45
Rpap1Q80TE0 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC-0.25□□□□□ -2.45
Rpap1Q80TE0 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC-0.25□□□□□ -2.45
Rpap1Q80TE0 Gm22984-201ENSMUST00000122751 122 ntBASIC-0.25□□□□□ -2.45
Rpap1Q80TE0 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
Rpap1Q80TE0 Gm44977-201ENSMUST00000205283 420 ntBASIC-0.25□□□□□ -2.45
Rpap1Q80TE0 AC167192.1-201ENSMUST00000225908 139 ntBASIC-0.25□□□□□ -2.45
Rpap1Q80TE0 Gm25142-201ENSMUST00000082698 107 ntBASIC-0.25□□□□□ -2.45
Rpap1Q80TE0 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.25□□□□□ -2.45
Rpap1Q80TE0 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.25□□□□□ -2.45
Rpap1Q80TE0 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC-0.26□□□□□ -2.45
Rpap1Q80TE0 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.26□□□□□ -2.45
Rpap1Q80TE0 Mir7093-201ENSMUST00000184195 101 ntBASIC-0.26□□□□□ -2.45
Rpap1Q80TE0 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.26□□□□□ -2.45
Rpap1Q80TE0 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.26□□□□□ -2.45
Rpap1Q80TE0 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.26□□□□□ -2.45
Rpap1Q80TE0 Gm43976-201ENSMUST00000203637 235 ntBASIC-0.26□□□□□ -2.45
Rpap1Q80TE0 Gm44687-201ENSMUST00000204975 235 ntBASIC-0.26□□□□□ -2.45
Rpap1Q80TE0 Gm7240-201ENSMUST00000220769 664 ntBASIC-0.26□□□□□ -2.45
Rpap1Q80TE0 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.26□□□□□ -2.45
Rpap1Q80TE0 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.26□□□□□ -2.45
Rpap1Q80TE0 Gm6952-201ENSMUST00000118629 159 ntBASIC-0.27□□□□□ -2.45
Rpap1Q80TE0 Gm12797-201ENSMUST00000118645 273 ntBASIC-0.27□□□□□ -2.45
Rpap1Q80TE0 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.27□□□□□ -2.45
Rpap1Q80TE0 Gm22815-201ENSMUST00000157451 62 ntBASIC-0.27□□□□□ -2.45
Rpap1Q80TE0 Gm24501-201ENSMUST00000158452 62 ntBASIC-0.27□□□□□ -2.45
Rpap1Q80TE0 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.27□□□□□ -2.45
Rpap1Q80TE0 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.27□□□□□ -2.45
Rpap1Q80TE0 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.27□□□□□ -2.45
Rpap1Q80TE0 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.27□□□□□ -2.45
Rpap1Q80TE0 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-0.27□□□□□ -2.45
Rpap1Q80TE0 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-0.27□□□□□ -2.45
Rpap1Q80TE0 Gm26479-201ENSMUST00000122620 106 ntBASIC-0.28□□□□□ -2.45
Rpap1Q80TE0 Gm22985-201ENSMUST00000122754 116 ntBASIC-0.28□□□□□ -2.45
Rpap1Q80TE0 Gm22767-201ENSMUST00000158365 165 ntBASIC-0.28□□□□□ -2.45
Rpap1Q80TE0 Gm26158-201ENSMUST00000158973 119 ntBASIC-0.28□□□□□ -2.45
Rpap1Q80TE0 Mir669k-201ENSMUST00000177742 127 ntBASIC-0.28□□□□□ -2.45
Rpap1Q80TE0 Gm24488-201ENSMUST00000179934 127 ntBASIC-0.28□□□□□ -2.45
Rpap1Q80TE0 Gm25673-201ENSMUST00000179957 127 ntBASIC-0.28□□□□□ -2.45
Rpap1Q80TE0 Gm25701-201ENSMUST00000179988 127 ntBASIC-0.28□□□□□ -2.45
Rpap1Q80TE0 Gm26431-201ENSMUST00000180199 127 ntBASIC-0.28□□□□□ -2.45
Rpap1Q80TE0 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.28□□□□□ -2.45
Rpap1Q80TE0 Mir18-201ENSMUST00000083469 96 ntBASIC-0.28□□□□□ -2.45
Rpap1Q80TE0 Gm25323-201ENSMUST00000122555 103 ntBASIC-0.29□□□□□ -2.46
Rpap1Q80TE0 Gm22999-201ENSMUST00000157082 88 ntBASIC-0.29□□□□□ -2.46
Rpap1Q80TE0 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.29□□□□□ -2.46
Rpap1Q80TE0 Gm28767-201ENSMUST00000188601 114 ntBASIC-0.29□□□□□ -2.46
Rpap1Q80TE0 Gm24316-201ENSMUST00000083041 107 ntBASIC-0.29□□□□□ -2.46
Rpap1Q80TE0 Gm23655-201ENSMUST00000122627 105 ntBASIC-0.3□□□□□ -2.46
Rpap1Q80TE0 Gm22118-201ENSMUST00000175593 171 ntBASIC-0.3□□□□□ -2.46
Rpap1Q80TE0 Gm38364-201ENSMUST00000191814 179 ntBASIC-0.3□□□□□ -2.46
Rpap1Q80TE0 Scarna9-201ENSMUST00000104318 70 ntBASIC-0.3□□□□□ -2.46
Rpap1Q80TE0 Gm23881-201ENSMUST00000116872 66 ntBASIC-0.3□□□□□ -2.46
Rpap1Q80TE0 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.3□□□□□ -2.46
Rpap1Q80TE0 Gm22450-201ENSMUST00000179641 107 ntBASIC-0.3□□□□□ -2.46
Rpap1Q80TE0 Gm25473-201ENSMUST00000180191 107 ntBASIC-0.3□□□□□ -2.46
Rpap1Q80TE0 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.3□□□□□ -2.46
Rpap1Q80TE0 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.3□□□□□ -2.46
Rpap1Q80TE0 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.3□□□□□ -2.46
Rpap1Q80TE0 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC-0.3□□□□□ -2.46
Rpap1Q80TE0 AC108945.1-201ENSMUST00000226477 94 ntBASIC-0.3□□□□□ -2.46
Rpap1Q80TE0 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.3□□□□□ -2.46
Rpap1Q80TE0 Gm24856-201ENSMUST00000082809 107 ntBASIC-0.3□□□□□ -2.46
Rpap1Q80TE0 Gm24521-201ENSMUST00000083958 107 ntBASIC-0.3□□□□□ -2.46
Rpap1Q80TE0 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC-0.31□□□□□ -2.46
Rpap1Q80TE0 Gm27723-201ENSMUST00000157398 63 ntBASIC-0.31□□□□□ -2.46
Rpap1Q80TE0 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.31□□□□□ -2.46
Rpap1Q80TE0 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC-0.31□□□□□ -2.46
Rpap1Q80TE0 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.31□□□□□ -2.46
Rpap1Q80TE0 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-0.31□□□□□ -2.46
Rpap1Q80TE0 Gm25793-201ENSMUST00000083287 107 ntBASIC-0.31□□□□□ -2.46
Rpap1Q80TE0 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.32□□□□□ -2.46
Rpap1Q80TE0 Gm12748-201ENSMUST00000120763 504 ntBASIC-0.32□□□□□ -2.46
Rpap1Q80TE0 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.32□□□□□ -2.46
Rpap1Q80TE0 Gm28489-201ENSMUST00000186655 316 ntBASIC-0.32□□□□□ -2.46
Rpap1Q80TE0 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.32□□□□□ -2.46
Rpap1Q80TE0 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.32□□□□□ -2.46
Rpap1Q80TE0 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.32□□□□□ -2.46
Rpap1Q80TE0 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.32□□□□□ -2.46
Rpap1Q80TE0 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC-0.33□□□□□ -2.46
Rpap1Q80TE0 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.33□□□□□ -2.46
Rpap1Q80TE0 Gm25424-201ENSMUST00000157612 58 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 76,532 protein–RNA pairs in 105.7 ms