Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm26217-201ENSMUST00000175212 84 ntBASIC1.37□□□□□ -2.19
Ubfd1Q78JW9 Mir3969-201ENSMUST00000197106 92 ntBASIC1.37□□□□□ -2.19
Ubfd1Q78JW9 Mir6962-201ENSMUST00000199512 63 ntBASIC1.37□□□□□ -2.19
Ubfd1Q78JW9 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC1.37□□□□□ -2.19
Ubfd1Q78JW9 AL627387.1-201ENSMUST00000226063 250 ntBASIC1.37□□□□□ -2.19
Ubfd1Q78JW9 Gm23947-201ENSMUST00000093636 107 ntBASIC1.37□□□□□ -2.19
Ubfd1Q78JW9 Gm24895-201ENSMUST00000122742 74 ntBASIC1.36□□□□□ -2.19
Ubfd1Q78JW9 Gm22963-201ENSMUST00000157960 91 ntBASIC1.36□□□□□ -2.19
Ubfd1Q78JW9 Gm23221-201ENSMUST00000158118 93 ntBASIC1.36□□□□□ -2.19
Ubfd1Q78JW9 Gm25011-201ENSMUST00000158398 126 ntBASIC1.36□□□□□ -2.19
Ubfd1Q78JW9 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.36□□□□□ -2.19
Ubfd1Q78JW9 Gm16399-201ENSMUST00000181423 219 ntBASIC1.36□□□□□ -2.19
Ubfd1Q78JW9 Gm27365-201ENSMUST00000184041 177 ntBASIC1.36□□□□□ -2.19
Ubfd1Q78JW9 Mir6240-201ENSMUST00000184281 117 ntBASIC1.36□□□□□ -2.19
Ubfd1Q78JW9 Mir7665-201ENSMUST00000184907 63 ntBASIC1.36□□□□□ -2.19
Ubfd1Q78JW9 Gm37545-201ENSMUST00000186512 148 ntBASIC1.36□□□□□ -2.19
Ubfd1Q78JW9 Gm18213-201ENSMUST00000207850 178 ntBASIC1.36□□□□□ -2.19
Ubfd1Q78JW9 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC1.36□□□□□ -2.19
Ubfd1Q78JW9 AC151902.2-201ENSMUST00000226419 301 ntBASIC1.36□□□□□ -2.19
Ubfd1Q78JW9 Mir19b-2-201ENSMUST00000083539 84 ntBASIC1.36□□□□□ -2.19
Ubfd1Q78JW9 Gm23907-201ENSMUST00000104595 189 ntBASIC1.35□□□□□ -2.19
Ubfd1Q78JW9 Gm22079-201ENSMUST00000157592 106 ntBASIC1.35□□□□□ -2.19
Ubfd1Q78JW9 Gm18502-201ENSMUST00000218679 199 ntBASIC1.35□□□□□ -2.19
Ubfd1Q78JW9 Gm25992-201ENSMUST00000102437 109 ntBASIC1.34□□□□□ -2.19
Ubfd1Q78JW9 Gm25495-201ENSMUST00000104431 131 ntBASIC1.34□□□□□ -2.19
Ubfd1Q78JW9 Gm23336-201ENSMUST00000117023 123 ntBASIC1.34□□□□□ -2.19
Ubfd1Q78JW9 Gm23859-201ENSMUST00000158383 64 ntBASIC1.34□□□□□ -2.19
Ubfd1Q78JW9 Gm17528-201ENSMUST00000171026 239 ntBASIC1.34□□□□□ -2.19
Ubfd1Q78JW9 Mir8119-201ENSMUST00000183371 129 ntBASIC1.34□□□□□ -2.19
Ubfd1Q78JW9 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC1.34□□□□□ -2.19
Ubfd1Q78JW9 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Ubfd1Q78JW9 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Ubfd1Q78JW9 AC168880.2-201ENSMUST00000224488 201 ntBASIC1.33□□□□□ -2.2
Ubfd1Q78JW9 Gm26224-201ENSMUST00000082506 80 ntBASIC1.33□□□□□ -2.2
Ubfd1Q78JW9 Gm25081-201ENSMUST00000082534 108 ntBASIC1.33□□□□□ -2.2
Ubfd1Q78JW9 Mir547-201ENSMUST00000102051 78 ntBASIC1.32□□□□□ -2.2
Ubfd1Q78JW9 Snord90-201ENSMUST00000104568 111 ntBASIC1.32□□□□□ -2.2
Ubfd1Q78JW9 Gm23114-201ENSMUST00000158478 117 ntBASIC1.32□□□□□ -2.2
Ubfd1Q78JW9 Gm23339-201ENSMUST00000158962 139 ntBASIC1.32□□□□□ -2.2
Ubfd1Q78JW9 Mir3968-201ENSMUST00000175355 100 ntBASIC1.32□□□□□ -2.2
Ubfd1Q78JW9 Gm27792-201ENSMUST00000184031 115 ntBASIC1.32□□□□□ -2.2
Ubfd1Q78JW9 Mir6928-201ENSMUST00000185166 70 ntBASIC1.32□□□□□ -2.2
Ubfd1Q78JW9 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.32□□□□□ -2.2
Ubfd1Q78JW9 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.32□□□□□ -2.2
Ubfd1Q78JW9 Gm23303-201ENSMUST00000082714 152 ntBASIC1.32□□□□□ -2.2
Ubfd1Q78JW9 Gm26123-201ENSMUST00000083363 135 ntBASIC1.32□□□□□ -2.2
Ubfd1Q78JW9 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.31□□□□□ -2.2
Ubfd1Q78JW9 Gm11644-201ENSMUST00000119735 150 ntBASIC1.31□□□□□ -2.2
Ubfd1Q78JW9 Gm22796-201ENSMUST00000157234 106 ntBASIC1.31□□□□□ -2.2
Ubfd1Q78JW9 Snord13-201ENSMUST00000157627 104 ntBASIC1.31□□□□□ -2.2
Ubfd1Q78JW9 Gm26412-201ENSMUST00000157666 55 ntBASIC1.31□□□□□ -2.2
Ubfd1Q78JW9 Gm22425-201ENSMUST00000158532 138 ntBASIC1.31□□□□□ -2.2
Ubfd1Q78JW9 Mir3098-201ENSMUST00000175416 87 ntBASIC1.31□□□□□ -2.2
Ubfd1Q78JW9 Gm27420-201ENSMUST00000183823 79 ntBASIC1.31□□□□□ -2.2
Ubfd1Q78JW9 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.31□□□□□ -2.2
Ubfd1Q78JW9 Gm8508-201ENSMUST00000061226 363 ntBASIC1.31□□□□□ -2.2
Ubfd1Q78JW9 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Ubfd1Q78JW9 Gm22673-201ENSMUST00000104415 131 ntBASIC1.3□□□□□ -2.2
Ubfd1Q78JW9 Gm11857-201ENSMUST00000119817 324 ntBASIC1.3□□□□□ -2.2
Ubfd1Q78JW9 Gm22336-201ENSMUST00000157719 107 ntBASIC1.3□□□□□ -2.2
Ubfd1Q78JW9 Gm22332-201ENSMUST00000158072 126 ntBASIC1.3□□□□□ -2.2
Ubfd1Q78JW9 Gm24001-201ENSMUST00000158463 85 ntBASIC1.3□□□□□ -2.2
Ubfd1Q78JW9 Gm27894-201ENSMUST00000184177 92 ntBASIC1.3□□□□□ -2.2
Ubfd1Q78JW9 Gm44462-201ENSMUST00000199696 129 ntBASIC1.3□□□□□ -2.2
Ubfd1Q78JW9 Gm44396-201ENSMUST00000199843 114 ntBASIC1.3□□□□□ -2.2
Ubfd1Q78JW9 Gm45268-201ENSMUST00000210046 370 ntBASIC1.3□□□□□ -2.2
Ubfd1Q78JW9 Gm10172-201ENSMUST00000085929 558 ntBASIC1.3□□□□□ -2.2
Ubfd1Q78JW9 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Ubfd1Q78JW9 Gm25611-201ENSMUST00000104017 133 ntBASIC1.29□□□□□ -2.2
Ubfd1Q78JW9 Gm24263-201ENSMUST00000104059 107 ntBASIC1.29□□□□□ -2.2
Ubfd1Q78JW9 Gm24747-201ENSMUST00000157835 87 ntBASIC1.29□□□□□ -2.2
Ubfd1Q78JW9 Gm24808-201ENSMUST00000157993 118 ntBASIC1.29□□□□□ -2.2
Ubfd1Q78JW9 Gm22862-201ENSMUST00000178593 121 ntBASIC1.29□□□□□ -2.2
Ubfd1Q78JW9 AC124739.2-201ENSMUST00000222201 109 ntBASIC1.29□□□□□ -2.2
Ubfd1Q78JW9 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.29□□□□□ -2.2
Ubfd1Q78JW9 Mir411-201ENSMUST00000083543 82 ntBASIC1.29□□□□□ -2.2
Ubfd1Q78JW9 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Ubfd1Q78JW9 Mir343-201ENSMUST00000102360 75 ntBASIC1.28□□□□□ -2.2
Ubfd1Q78JW9 Gm22815-201ENSMUST00000157451 62 ntBASIC1.28□□□□□ -2.2
Ubfd1Q78JW9 Gm16307-201ENSMUST00000161269 210 ntBASIC1.28□□□□□ -2.2
Ubfd1Q78JW9 Gm22286-201ENSMUST00000179708 107 ntBASIC1.28□□□□□ -2.2
Ubfd1Q78JW9 Gm22809-201ENSMUST00000082743 156 ntBASIC1.28□□□□□ -2.2
Ubfd1Q78JW9 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Ubfd1Q78JW9 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Ubfd1Q78JW9 Mir669b-201ENSMUST00000102172 97 ntBASIC1.27□□□□□ -2.21
Ubfd1Q78JW9 Gm44489-201ENSMUST00000104619 97 ntBASIC1.27□□□□□ -2.21
Ubfd1Q78JW9 Gm23329-201ENSMUST00000157415 108 ntBASIC1.27□□□□□ -2.21
Ubfd1Q78JW9 Gm25069-201ENSMUST00000175238 86 ntBASIC1.27□□□□□ -2.21
Ubfd1Q78JW9 Mir7059-201ENSMUST00000184825 59 ntBASIC1.27□□□□□ -2.21
Ubfd1Q78JW9 Mir468-201ENSMUST00000197332 78 ntBASIC1.27□□□□□ -2.21
Ubfd1Q78JW9 Gm23445-201ENSMUST00000082800 107 ntBASIC1.27□□□□□ -2.21
Ubfd1Q78JW9 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.27□□□□□ -2.21
Ubfd1Q78JW9 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.27□□□□□ -2.21
Ubfd1Q78JW9 Gm22842-201ENSMUST00000157709 118 ntBASIC1.26□□□□□ -2.21
Ubfd1Q78JW9 Gm24154-201ENSMUST00000175261 130 ntBASIC1.26□□□□□ -2.21
Ubfd1Q78JW9 Mir6377-201ENSMUST00000183760 114 ntBASIC1.26□□□□□ -2.21
Ubfd1Q78JW9 Gm27446-201ENSMUST00000183963 89 ntBASIC1.26□□□□□ -2.21
Ubfd1Q78JW9 Gm27668-201ENSMUST00000184188 120 ntBASIC1.26□□□□□ -2.21
Ubfd1Q78JW9 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Ubfd1Q78JW9 Gm22003-201ENSMUST00000101885 107 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 136.2 ms