Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Ddx58Q6Q899 Mir468-201ENSMUST00000197332 78 ntBASIC1.26□□□□□ -2.21
Ddx58Q6Q899 Mir471-201ENSMUST00000093596 67 ntBASIC1.26□□□□□ -2.21
Ddx58Q6Q899 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.25□□□□□ -2.21
Ddx58Q6Q899 Gm44976-201ENSMUST00000205543 261 ntBASIC1.25□□□□□ -2.21
Ddx58Q6Q899 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC1.25□□□□□ -2.21
Ddx58Q6Q899 Gm44948-201ENSMUST00000209050 149 ntBASIC1.25□□□□□ -2.21
Ddx58Q6Q899 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Ddx58Q6Q899 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.25□□□□□ -2.21
Ddx58Q6Q899 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Ddx58Q6Q899 Gm25506-201ENSMUST00000104339 70 ntBASIC1.24□□□□□ -2.21
Ddx58Q6Q899 Mir1961-201ENSMUST00000158643 112 ntBASIC1.24□□□□□ -2.21
Ddx58Q6Q899 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Ddx58Q6Q899 Gm27803-201ENSMUST00000183763 119 ntBASIC1.24□□□□□ -2.21
Ddx58Q6Q899 Mir6394-201ENSMUST00000184738 99 ntBASIC1.24□□□□□ -2.21
Ddx58Q6Q899 Gm44462-201ENSMUST00000199696 129 ntBASIC1.24□□□□□ -2.21
Ddx58Q6Q899 Gm43898-201ENSMUST00000204456 424 ntBASIC1.24□□□□□ -2.21
Ddx58Q6Q899 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.24□□□□□ -2.21
Ddx58Q6Q899 Gm24271-201ENSMUST00000102327 111 ntBASIC1.23□□□□□ -2.21
Ddx58Q6Q899 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Ddx58Q6Q899 Mir1904-201ENSMUST00000122702 80 ntBASIC1.23□□□□□ -2.21
Ddx58Q6Q899 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Ddx58Q6Q899 Snord80-202ENSMUST00000199023 77 ntBASIC1.23□□□□□ -2.21
Ddx58Q6Q899 Gm42506-201ENSMUST00000202009 150 ntBASIC1.23□□□□□ -2.21
Ddx58Q6Q899 Gm24311-201ENSMUST00000082570 104 ntBASIC1.23□□□□□ -2.21
Ddx58Q6Q899 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.22□□□□□ -2.21
Ddx58Q6Q899 Gm23893-201ENSMUST00000158106 134 ntBASIC1.21□□□□□ -2.22
Ddx58Q6Q899 Gm22946-201ENSMUST00000158558 82 ntBASIC1.21□□□□□ -2.22
Ddx58Q6Q899 Gm18213-201ENSMUST00000207850 178 ntBASIC1.21□□□□□ -2.22
Ddx58Q6Q899 Gm26204-201ENSMUST00000082906 107 ntBASIC1.21□□□□□ -2.22
Ddx58Q6Q899 Gm26123-201ENSMUST00000083363 135 ntBASIC1.21□□□□□ -2.22
Ddx58Q6Q899 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
Ddx58Q6Q899 Gm25241-201ENSMUST00000174909 84 ntBASIC1.2□□□□□ -2.22
Ddx58Q6Q899 Gm26217-201ENSMUST00000175212 84 ntBASIC1.2□□□□□ -2.22
Ddx58Q6Q899 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC1.2□□□□□ -2.22
Ddx58Q6Q899 Gm25588-201ENSMUST00000082501 140 ntBASIC1.2□□□□□ -2.22
Ddx58Q6Q899 Mir27b-201ENSMUST00000083541 73 ntBASIC1.2□□□□□ -2.22
Ddx58Q6Q899 Gm22815-201ENSMUST00000157451 62 ntBASIC1.19□□□□□ -2.22
Ddx58Q6Q899 Gm20118-201ENSMUST00000187207 162 ntBASIC1.19□□□□□ -2.22
Ddx58Q6Q899 Gm26076-201ENSMUST00000104065 105 ntBASIC1.18□□□□□ -2.22
Ddx58Q6Q899 Mir466h-201ENSMUST00000104748 81 ntBASIC1.18□□□□□ -2.22
Ddx58Q6Q899 Gm22612-201ENSMUST00000158293 101 ntBASIC1.18□□□□□ -2.22
Ddx58Q6Q899 Gm22565-201ENSMUST00000175540 69 ntBASIC1.18□□□□□ -2.22
Ddx58Q6Q899 Mir6985-201ENSMUST00000184641 61 ntBASIC1.18□□□□□ -2.22
Ddx58Q6Q899 Gm45268-201ENSMUST00000210046 370 ntBASIC1.18□□□□□ -2.22
Ddx58Q6Q899 Mir709-201ENSMUST00000102190 88 ntBASIC1.17□□□□□ -2.22
Ddx58Q6Q899 Gm24777-201ENSMUST00000157644 107 ntBASIC1.17□□□□□ -2.22
Ddx58Q6Q899 Gm22425-201ENSMUST00000158532 138 ntBASIC1.17□□□□□ -2.22
Ddx58Q6Q899 Gm27974-201ENSMUST00000183415 105 ntBASIC1.17□□□□□ -2.22
Ddx58Q6Q899 Gm44853-201ENSMUST00000209070 250 ntBASIC1.17□□□□□ -2.22
Ddx58Q6Q899 CT030645.1-201ENSMUST00000224020 231 ntBASIC1.17□□□□□ -2.22
Ddx58Q6Q899 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Ddx58Q6Q899 Mir6380-201ENSMUST00000184334 81 ntBASIC1.16□□□□□ -2.22
Ddx58Q6Q899 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.16□□□□□ -2.22
Ddx58Q6Q899 Gm24457-201ENSMUST00000083196 105 ntBASIC1.16□□□□□ -2.22
Ddx58Q6Q899 Gm25943-201ENSMUST00000103791 90 ntBASIC1.15□□□□□ -2.23
Ddx58Q6Q899 Mir466b-7-201ENSMUST00000103804 88 ntBASIC1.15□□□□□ -2.23
Ddx58Q6Q899 Mir466b-5-201ENSMUST00000103900 88 ntBASIC1.15□□□□□ -2.23
Ddx58Q6Q899 Gm24342-201ENSMUST00000103907 104 ntBASIC1.15□□□□□ -2.23
Ddx58Q6Q899 Mir466b-4-201ENSMUST00000178801 90 ntBASIC1.15□□□□□ -2.23
Ddx58Q6Q899 Gm25285-201ENSMUST00000178951 90 ntBASIC1.15□□□□□ -2.23
Ddx58Q6Q899 Mir466b-6-201ENSMUST00000180061 90 ntBASIC1.15□□□□□ -2.23
Ddx58Q6Q899 Gm24020-201ENSMUST00000180156 108 ntBASIC1.15□□□□□ -2.23
Ddx58Q6Q899 Mir466c-2-201ENSMUST00000180211 90 ntBASIC1.15□□□□□ -2.23
Ddx58Q6Q899 Gm42533-201ENSMUST00000196247 157 ntBASIC1.15□□□□□ -2.23
Ddx58Q6Q899 Gm44458-201ENSMUST00000196594 143 ntBASIC1.15□□□□□ -2.23
Ddx58Q6Q899 Gm25769-201ENSMUST00000158569 127 ntBASIC1.14□□□□□ -2.23
Ddx58Q6Q899 Mir6377-201ENSMUST00000183760 114 ntBASIC1.14□□□□□ -2.23
Ddx58Q6Q899 Mir19b-2-201ENSMUST00000083539 84 ntBASIC1.14□□□□□ -2.23
Ddx58Q6Q899 Snord35a-201ENSMUST00000083884 90 ntBASIC1.14□□□□□ -2.23
Ddx58Q6Q899 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.14□□□□□ -2.23
Ddx58Q6Q899 Gm23772-201ENSMUST00000104433 102 ntBASIC1.13□□□□□ -2.23
Ddx58Q6Q899 Gm22790-201ENSMUST00000157229 129 ntBASIC1.13□□□□□ -2.23
Ddx58Q6Q899 Gm16546-201ENSMUST00000159442 355 ntBASIC1.13□□□□□ -2.23
Ddx58Q6Q899 Mir7116-201ENSMUST00000195956 70 ntBASIC1.13□□□□□ -2.23
Ddx58Q6Q899 Gm44490-201ENSMUST00000198566 127 ntBASIC1.13□□□□□ -2.23
Ddx58Q6Q899 Gm8219-201ENSMUST00000218309 242 ntBASIC1.13□□□□□ -2.23
Ddx58Q6Q899 AC153646.2-201ENSMUST00000220516 109 ntBASIC1.13□□□□□ -2.23
Ddx58Q6Q899 Mir344-201ENSMUST00000083634 95 ntBASIC1.13□□□□□ -2.23
Ddx58Q6Q899 Gm23080-201ENSMUST00000157846 103 ntBASIC1.12□□□□□ -2.23
Ddx58Q6Q899 Gm25166-201ENSMUST00000158909 111 ntBASIC1.12□□□□□ -2.23
Ddx58Q6Q899 Trav5-2-201ENSMUST00000199855 280 ntBASIC1.12□□□□□ -2.23
Ddx58Q6Q899 Gm22576-201ENSMUST00000083733 104 ntBASIC1.12□□□□□ -2.23
Ddx58Q6Q899 Gm26420-201ENSMUST00000104273 103 ntBASIC1.11□□□□□ -2.23
Ddx58Q6Q899 Gm24250-201ENSMUST00000157320 135 ntBASIC1.11□□□□□ -2.23
Ddx58Q6Q899 Gm22801-201ENSMUST00000175624 84 ntBASIC1.11□□□□□ -2.23
Ddx58Q6Q899 Gm23770-201ENSMUST00000178009 108 ntBASIC1.11□□□□□ -2.23
Ddx58Q6Q899 Gm22832-201ENSMUST00000178022 108 ntBASIC1.11□□□□□ -2.23
Ddx58Q6Q899 Gm23863-201ENSMUST00000178265 108 ntBASIC1.11□□□□□ -2.23
Ddx58Q6Q899 Gm24828-201ENSMUST00000178507 108 ntBASIC1.11□□□□□ -2.23
Ddx58Q6Q899 Gm23052-201ENSMUST00000178633 108 ntBASIC1.11□□□□□ -2.23
Ddx58Q6Q899 Gm25729-201ENSMUST00000179050 108 ntBASIC1.11□□□□□ -2.23
Ddx58Q6Q899 Gm25359-201ENSMUST00000179315 108 ntBASIC1.11□□□□□ -2.23
Ddx58Q6Q899 Gm22624-201ENSMUST00000179913 108 ntBASIC1.11□□□□□ -2.23
Ddx58Q6Q899 Gm44922-201ENSMUST00000206690 90 ntBASIC1.11□□□□□ -2.23
Ddx58Q6Q899 Mir488-201ENSMUST00000093595 109 ntBASIC1.11□□□□□ -2.23
Ddx58Q6Q899 Gm23763-201ENSMUST00000158345 60 ntBASIC1.1□□□□□ -2.23
Ddx58Q6Q899 Mir3079-201ENSMUST00000175428 90 ntBASIC1.1□□□□□ -2.23
Ddx58Q6Q899 Gm27587-201ENSMUST00000185116 163 ntBASIC1.1□□□□□ -2.23
Ddx58Q6Q899 AL929417.1-201ENSMUST00000214901 124 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms