Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm44948-201ENSMUST00000209050 149 ntBASIC1.14□□□□□ -2.23
Smarca1Q6PGB8 Gm45268-201ENSMUST00000210046 370 ntBASIC1.14□□□□□ -2.23
Smarca1Q6PGB8 Gm24311-201ENSMUST00000082570 104 ntBASIC1.14□□□□□ -2.23
Smarca1Q6PGB8 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.13□□□□□ -2.23
Smarca1Q6PGB8 Gm24401-201ENSMUST00000157868 91 ntBASIC1.13□□□□□ -2.23
Smarca1Q6PGB8 Gm26360-201ENSMUST00000158872 103 ntBASIC1.13□□□□□ -2.23
Smarca1Q6PGB8 Gm25241-201ENSMUST00000174909 84 ntBASIC1.13□□□□□ -2.23
Smarca1Q6PGB8 Gm26217-201ENSMUST00000175212 84 ntBASIC1.13□□□□□ -2.23
Smarca1Q6PGB8 Gm23567-201ENSMUST00000178005 107 ntBASIC1.13□□□□□ -2.23
Smarca1Q6PGB8 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC1.13□□□□□ -2.23
Smarca1Q6PGB8 Gm26326-201ENSMUST00000083070 129 ntBASIC1.13□□□□□ -2.23
Smarca1Q6PGB8 Gm22557-201ENSMUST00000157804 102 ntBASIC1.12□□□□□ -2.23
Smarca1Q6PGB8 Gm25364-201ENSMUST00000158851 107 ntBASIC1.12□□□□□ -2.23
Smarca1Q6PGB8 Gm27694-201ENSMUST00000184740 86 ntBASIC1.12□□□□□ -2.23
Smarca1Q6PGB8 Gm42533-201ENSMUST00000196247 157 ntBASIC1.12□□□□□ -2.23
Smarca1Q6PGB8 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.12□□□□□ -2.23
Smarca1Q6PGB8 Gm23347-201ENSMUST00000083823 82 ntBASIC1.12□□□□□ -2.23
Smarca1Q6PGB8 Mir471-201ENSMUST00000093596 67 ntBASIC1.12□□□□□ -2.23
Smarca1Q6PGB8 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Smarca1Q6PGB8 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.11□□□□□ -2.23
Smarca1Q6PGB8 Gm26076-201ENSMUST00000104065 105 ntBASIC1.11□□□□□ -2.23
Smarca1Q6PGB8 Gm25565-201ENSMUST00000104605 105 ntBASIC1.11□□□□□ -2.23
Smarca1Q6PGB8 Gm23991-201ENSMUST00000117033 93 ntBASIC1.11□□□□□ -2.23
Smarca1Q6PGB8 Gm23893-201ENSMUST00000158106 134 ntBASIC1.11□□□□□ -2.23
Smarca1Q6PGB8 Gm37116-201ENSMUST00000195161 147 ntBASIC1.11□□□□□ -2.23
Smarca1Q6PGB8 Gm25588-201ENSMUST00000082501 140 ntBASIC1.11□□□□□ -2.23
Smarca1Q6PGB8 Gm26204-201ENSMUST00000082906 107 ntBASIC1.11□□□□□ -2.23
Smarca1Q6PGB8 Gm23461-201ENSMUST00000083265 107 ntBASIC1.11□□□□□ -2.23
Smarca1Q6PGB8 Mir27b-201ENSMUST00000083541 73 ntBASIC1.11□□□□□ -2.23
Smarca1Q6PGB8 Gm22482-201ENSMUST00000122563 359 ntBASIC1.1□□□□□ -2.23
Smarca1Q6PGB8 Gm25985-201ENSMUST00000122677 107 ntBASIC1.1□□□□□ -2.23
Smarca1Q6PGB8 Gm26123-201ENSMUST00000083363 135 ntBASIC1.1□□□□□ -2.23
Smarca1Q6PGB8 Mir10b-201ENSMUST00000083566 68 ntBASIC1.1□□□□□ -2.23
Smarca1Q6PGB8 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Smarca1Q6PGB8 Mir547-201ENSMUST00000102051 78 ntBASIC1.09□□□□□ -2.23
Smarca1Q6PGB8 Gm25166-201ENSMUST00000158909 111 ntBASIC1.09□□□□□ -2.23
Smarca1Q6PGB8 Mir6380-201ENSMUST00000184334 81 ntBASIC1.09□□□□□ -2.23
Smarca1Q6PGB8 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.09□□□□□ -2.23
Smarca1Q6PGB8 Mir709-201ENSMUST00000102190 88 ntBASIC1.08□□□□□ -2.24
Smarca1Q6PGB8 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Smarca1Q6PGB8 Gm25769-201ENSMUST00000158569 127 ntBASIC1.08□□□□□ -2.24
Smarca1Q6PGB8 Gm24415-201ENSMUST00000180218 107 ntBASIC1.08□□□□□ -2.24
Smarca1Q6PGB8 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.08□□□□□ -2.24
Smarca1Q6PGB8 Gm11248-201ENSMUST00000119568 201 ntBASIC1.07□□□□□ -2.24
Smarca1Q6PGB8 Gm24777-201ENSMUST00000157644 107 ntBASIC1.07□□□□□ -2.24
Smarca1Q6PGB8 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1.07□□□□□ -2.24
Smarca1Q6PGB8 Snord35a-201ENSMUST00000083884 90 ntBASIC1.07□□□□□ -2.24
Smarca1Q6PGB8 Mir489-201ENSMUST00000093599 107 ntBASIC1.07□□□□□ -2.24
Smarca1Q6PGB8 Gm22790-201ENSMUST00000157229 129 ntBASIC1.06□□□□□ -2.24
Smarca1Q6PGB8 Gm26358-201ENSMUST00000158215 97 ntBASIC1.06□□□□□ -2.24
Smarca1Q6PGB8 Gm22612-201ENSMUST00000158293 101 ntBASIC1.06□□□□□ -2.24
Smarca1Q6PGB8 Gm16307-201ENSMUST00000161269 210 ntBASIC1.06□□□□□ -2.24
Smarca1Q6PGB8 Snord80-202ENSMUST00000199023 77 ntBASIC1.06□□□□□ -2.24
Smarca1Q6PGB8 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC1.06□□□□□ -2.24
Smarca1Q6PGB8 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.06□□□□□ -2.24
Smarca1Q6PGB8 Gm24431-201ENSMUST00000104073 66 ntBASIC1.05□□□□□ -2.24
Smarca1Q6PGB8 Gm22148-201ENSMUST00000104445 107 ntBASIC1.05□□□□□ -2.24
Smarca1Q6PGB8 Gm22815-201ENSMUST00000157451 62 ntBASIC1.05□□□□□ -2.24
Smarca1Q6PGB8 Gm22425-201ENSMUST00000158532 138 ntBASIC1.05□□□□□ -2.24
Smarca1Q6PGB8 Gm22621-201ENSMUST00000179678 74 ntBASIC1.05□□□□□ -2.24
Smarca1Q6PGB8 Gm27803-201ENSMUST00000183763 119 ntBASIC1.05□□□□□ -2.24
Smarca1Q6PGB8 Gm37746-201ENSMUST00000193249 198 ntBASIC1.05□□□□□ -2.24
Smarca1Q6PGB8 AC153646.2-201ENSMUST00000220516 109 ntBASIC1.05□□□□□ -2.24
Smarca1Q6PGB8 Gm23140-201ENSMUST00000082487 107 ntBASIC1.05□□□□□ -2.24
Smarca1Q6PGB8 Gm24616-201ENSMUST00000083274 139 ntBASIC1.05□□□□□ -2.24
Smarca1Q6PGB8 Gm26420-201ENSMUST00000104273 103 ntBASIC1.04□□□□□ -2.24
Smarca1Q6PGB8 Gm25882-201ENSMUST00000157784 85 ntBASIC1.04□□□□□ -2.24
Smarca1Q6PGB8 Gm22989-201ENSMUST00000158313 86 ntBASIC1.04□□□□□ -2.24
Smarca1Q6PGB8 Gm27974-201ENSMUST00000183415 105 ntBASIC1.04□□□□□ -2.24
Smarca1Q6PGB8 Gm37624-201ENSMUST00000193751 219 ntBASIC1.04□□□□□ -2.24
Smarca1Q6PGB8 Gm44462-201ENSMUST00000199696 129 ntBASIC1.04□□□□□ -2.24
Smarca1Q6PGB8 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Smarca1Q6PGB8 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Smarca1Q6PGB8 Gm25611-201ENSMUST00000104017 133 ntBASIC1.03□□□□□ -2.24
Smarca1Q6PGB8 Gm22195-201ENSMUST00000116861 108 ntBASIC1.03□□□□□ -2.24
Smarca1Q6PGB8 Gm23080-201ENSMUST00000157846 103 ntBASIC1.03□□□□□ -2.24
Smarca1Q6PGB8 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Smarca1Q6PGB8 Gm20118-201ENSMUST00000187207 162 ntBASIC1.03□□□□□ -2.24
Smarca1Q6PGB8 CT030645.1-201ENSMUST00000224020 231 ntBASIC1.03□□□□□ -2.24
Smarca1Q6PGB8 Mir33-201ENSMUST00000083531 69 ntBASIC1.03□□□□□ -2.24
Smarca1Q6PGB8 Gm25901-201ENSMUST00000158494 130 ntBASIC1.02□□□□□ -2.25
Smarca1Q6PGB8 Gm22887-201ENSMUST00000178586 107 ntBASIC1.02□□□□□ -2.25
Smarca1Q6PGB8 Mir201-201ENSMUST00000083470 66 ntBASIC1.02□□□□□ -2.25
Smarca1Q6PGB8 Gm22469-201ENSMUST00000104118 133 ntBASIC1.01□□□□□ -2.25
Smarca1Q6PGB8 Gm26274-201ENSMUST00000157103 321 ntBASIC1.01□□□□□ -2.25
Smarca1Q6PGB8 Gm25968-201ENSMUST00000157167 100 ntBASIC1.01□□□□□ -2.25
Smarca1Q6PGB8 Gm22946-201ENSMUST00000158558 82 ntBASIC1.01□□□□□ -2.25
Smarca1Q6PGB8 Gm16546-201ENSMUST00000159442 355 ntBASIC1.01□□□□□ -2.25
Smarca1Q6PGB8 Mir6377-201ENSMUST00000183760 114 ntBASIC1.01□□□□□ -2.25
Smarca1Q6PGB8 Gm38323-201ENSMUST00000192450 210 ntBASIC1.01□□□□□ -2.25
Smarca1Q6PGB8 Gm44853-201ENSMUST00000209070 250 ntBASIC1.01□□□□□ -2.25
Smarca1Q6PGB8 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC1.01□□□□□ -2.25
Smarca1Q6PGB8 Mir9-2-201ENSMUST00000083490 72 ntBASIC1.01□□□□□ -2.25
Smarca1Q6PGB8 Gm23772-201ENSMUST00000104433 102 ntBASIC1□□□□□ -2.25
Smarca1Q6PGB8 Gm24250-201ENSMUST00000157320 135 ntBASIC1□□□□□ -2.25
Smarca1Q6PGB8 Gm22801-201ENSMUST00000175624 84 ntBASIC1□□□□□ -2.25
Smarca1Q6PGB8 Gm23770-201ENSMUST00000178009 108 ntBASIC1□□□□□ -2.25
Smarca1Q6PGB8 Gm22832-201ENSMUST00000178022 108 ntBASIC1□□□□□ -2.25
Smarca1Q6PGB8 Gm23863-201ENSMUST00000178265 108 ntBASIC1□□□□□ -2.25
Smarca1Q6PGB8 Gm24828-201ENSMUST00000178507 108 ntBASIC1□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 230.5 ms