Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Rnf220Q6PDX6 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.54□□□□□ -2.16
Rnf220Q6PDX6 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.53□□□□□ -2.16
Rnf220Q6PDX6 Gm26091-201ENSMUST00000122704 82 ntBASIC1.53□□□□□ -2.16
Rnf220Q6PDX6 Gm27851-201ENSMUST00000183529 63 ntBASIC1.53□□□□□ -2.16
Rnf220Q6PDX6 Mir6997-201ENSMUST00000184313 71 ntBASIC1.53□□□□□ -2.16
Rnf220Q6PDX6 Mir322-201ENSMUST00000083484 95 ntBASIC1.53□□□□□ -2.16
Rnf220Q6PDX6 Gm13433-201ENSMUST00000121701 240 ntBASIC1.52□□□□□ -2.17
Rnf220Q6PDX6 Gm24895-201ENSMUST00000122742 74 ntBASIC1.52□□□□□ -2.17
Rnf220Q6PDX6 Gm22384-201ENSMUST00000158187 104 ntBASIC1.52□□□□□ -2.17
Rnf220Q6PDX6 Mir3094-201ENSMUST00000175121 64 ntBASIC1.52□□□□□ -2.17
Rnf220Q6PDX6 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.52□□□□□ -2.17
Rnf220Q6PDX6 Gm42795-201ENSMUST00000198847 76 ntBASIC1.52□□□□□ -2.17
Rnf220Q6PDX6 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Rnf220Q6PDX6 Gm23253-201ENSMUST00000157441 104 ntBASIC1.51□□□□□ -2.17
Rnf220Q6PDX6 Gm24174-201ENSMUST00000158933 111 ntBASIC1.51□□□□□ -2.17
Rnf220Q6PDX6 Gm20409-201ENSMUST00000173457 130 ntBASIC1.51□□□□□ -2.17
Rnf220Q6PDX6 Gm16399-201ENSMUST00000181423 219 ntBASIC1.51□□□□□ -2.17
Rnf220Q6PDX6 Gm44962-201ENSMUST00000206460 279 ntBASIC1.51□□□□□ -2.17
Rnf220Q6PDX6 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.51□□□□□ -2.17
Rnf220Q6PDX6 Gm16976-205ENSMUST00000227324 226 ntBASIC1.51□□□□□ -2.17
Rnf220Q6PDX6 Gm24246-201ENSMUST00000157315 132 ntBASIC1.5□□□□□ -2.17
Rnf220Q6PDX6 Snord13-201ENSMUST00000157627 104 ntBASIC1.5□□□□□ -2.17
Rnf220Q6PDX6 Gm27420-201ENSMUST00000183823 79 ntBASIC1.5□□□□□ -2.17
Rnf220Q6PDX6 Gm27668-201ENSMUST00000184188 120 ntBASIC1.5□□□□□ -2.17
Rnf220Q6PDX6 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.5□□□□□ -2.17
Rnf220Q6PDX6 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.5□□□□□ -2.17
Rnf220Q6PDX6 CT485607.2-201ENSMUST00000214650 91 ntBASIC1.5□□□□□ -2.17
Rnf220Q6PDX6 Gm26224-201ENSMUST00000082506 80 ntBASIC1.5□□□□□ -2.17
Rnf220Q6PDX6 Gm22809-201ENSMUST00000082743 156 ntBASIC1.5□□□□□ -2.17
Rnf220Q6PDX6 Gm24449-201ENSMUST00000083985 106 ntBASIC1.5□□□□□ -2.17
Rnf220Q6PDX6 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.49□□□□□ -2.17
Rnf220Q6PDX6 Gm24718-201ENSMUST00000157521 136 ntBASIC1.49□□□□□ -2.17
Rnf220Q6PDX6 Gm16307-201ENSMUST00000161269 210 ntBASIC1.49□□□□□ -2.17
Rnf220Q6PDX6 Gm22551-201ENSMUST00000157795 103 ntBASIC1.48□□□□□ -2.17
Rnf220Q6PDX6 Gm23114-201ENSMUST00000158478 117 ntBASIC1.48□□□□□ -2.17
Rnf220Q6PDX6 Gm24676-201ENSMUST00000158758 75 ntBASIC1.48□□□□□ -2.17
Rnf220Q6PDX6 Mir669j-201ENSMUST00000179023 121 ntBASIC1.48□□□□□ -2.17
Rnf220Q6PDX6 Mir6377-201ENSMUST00000183760 114 ntBASIC1.48□□□□□ -2.17
Rnf220Q6PDX6 Mir7017-201ENSMUST00000184894 62 ntBASIC1.48□□□□□ -2.17
Rnf220Q6PDX6 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC1.48□□□□□ -2.17
Rnf220Q6PDX6 Gm25636-201ENSMUST00000082666 133 ntBASIC1.48□□□□□ -2.17
Rnf220Q6PDX6 Gm25610-201ENSMUST00000104016 129 ntBASIC1.47□□□□□ -2.17
Rnf220Q6PDX6 Gm23339-201ENSMUST00000158962 139 ntBASIC1.47□□□□□ -2.17
Rnf220Q6PDX6 Gm16550-201ENSMUST00000162550 126 ntBASIC1.47□□□□□ -2.17
Rnf220Q6PDX6 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Rnf220Q6PDX6 Gm44807-201ENSMUST00000206115 154 ntBASIC1.47□□□□□ -2.17
Rnf220Q6PDX6 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Rnf220Q6PDX6 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Rnf220Q6PDX6 Gm25279-201ENSMUST00000122608 133 ntBASIC1.46□□□□□ -2.18
Rnf220Q6PDX6 Gm24509-201ENSMUST00000157086 101 ntBASIC1.46□□□□□ -2.18
Rnf220Q6PDX6 Gm25358-201ENSMUST00000157189 101 ntBASIC1.46□□□□□ -2.18
Rnf220Q6PDX6 Gm22963-201ENSMUST00000157960 91 ntBASIC1.46□□□□□ -2.18
Rnf220Q6PDX6 Gm25958-201ENSMUST00000175114 71 ntBASIC1.46□□□□□ -2.18
Rnf220Q6PDX6 Gm24167-201ENSMUST00000177733 124 ntBASIC1.46□□□□□ -2.18
Rnf220Q6PDX6 Gm24028-201ENSMUST00000178991 124 ntBASIC1.46□□□□□ -2.18
Rnf220Q6PDX6 Mir7226-201ENSMUST00000184953 60 ntBASIC1.46□□□□□ -2.18
Rnf220Q6PDX6 Mir468-201ENSMUST00000197332 78 ntBASIC1.46□□□□□ -2.18
Rnf220Q6PDX6 Gm44396-201ENSMUST00000199843 114 ntBASIC1.46□□□□□ -2.18
Rnf220Q6PDX6 Gm23951-201ENSMUST00000104029 132 ntBASIC1.45□□□□□ -2.18
Rnf220Q6PDX6 Gm25495-201ENSMUST00000104431 131 ntBASIC1.45□□□□□ -2.18
Rnf220Q6PDX6 Gm23907-201ENSMUST00000104595 189 ntBASIC1.45□□□□□ -2.18
Rnf220Q6PDX6 Mir6406-201ENSMUST00000183592 120 ntBASIC1.45□□□□□ -2.18
Rnf220Q6PDX6 Mir8090-201ENSMUST00000185078 136 ntBASIC1.45□□□□□ -2.18
Rnf220Q6PDX6 Gm44948-201ENSMUST00000209050 149 ntBASIC1.45□□□□□ -2.18
Rnf220Q6PDX6 Gm24808-201ENSMUST00000157993 118 ntBASIC1.44□□□□□ -2.18
Rnf220Q6PDX6 Gm23838-201ENSMUST00000158067 162 ntBASIC1.44□□□□□ -2.18
Rnf220Q6PDX6 Mir7679-201ENSMUST00000183379 63 ntBASIC1.44□□□□□ -2.18
Rnf220Q6PDX6 Gm28383-201ENSMUST00000187563 139 ntBASIC1.44□□□□□ -2.18
Rnf220Q6PDX6 Gm44483-201ENSMUST00000197203 97 ntBASIC1.44□□□□□ -2.18
Rnf220Q6PDX6 Gm24406-201ENSMUST00000083026 128 ntBASIC1.44□□□□□ -2.18
Rnf220Q6PDX6 Gm26181-201ENSMUST00000157687 106 ntBASIC1.43□□□□□ -2.18
Rnf220Q6PDX6 Gm15289-201ENSMUST00000117793 244 ntBASIC1.42□□□□□ -2.18
Rnf220Q6PDX6 Gm16186-201ENSMUST00000120132 216 ntBASIC1.42□□□□□ -2.18
Rnf220Q6PDX6 Mir669n-201ENSMUST00000158636 54 ntBASIC1.42□□□□□ -2.18
Rnf220Q6PDX6 Gm44320-201ENSMUST00000199276 86 ntBASIC1.42□□□□□ -2.18
Rnf220Q6PDX6 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.42□□□□□ -2.18
Rnf220Q6PDX6 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.42□□□□□ -2.18
Rnf220Q6PDX6 Gm26454-201ENSMUST00000082682 107 ntBASIC1.42□□□□□ -2.18
Rnf220Q6PDX6 Mir324-201ENSMUST00000083600 89 ntBASIC1.42□□□□□ -2.18
Rnf220Q6PDX6 Mir758-201ENSMUST00000103260 81 ntBASIC1.41□□□□□ -2.18
Rnf220Q6PDX6 Gm23950-201ENSMUST00000104026 129 ntBASIC1.41□□□□□ -2.18
Rnf220Q6PDX6 Gm23109-201ENSMUST00000116867 126 ntBASIC1.41□□□□□ -2.18
Rnf220Q6PDX6 Gm11857-201ENSMUST00000119817 324 ntBASIC1.41□□□□□ -2.18
Rnf220Q6PDX6 Gm24401-201ENSMUST00000157868 91 ntBASIC1.41□□□□□ -2.18
Rnf220Q6PDX6 Gm23763-201ENSMUST00000158345 60 ntBASIC1.41□□□□□ -2.18
Rnf220Q6PDX6 Mir1961-201ENSMUST00000158643 112 ntBASIC1.41□□□□□ -2.18
Rnf220Q6PDX6 Gm25367-201ENSMUST00000158846 106 ntBASIC1.41□□□□□ -2.18
Rnf220Q6PDX6 Gm24177-201ENSMUST00000158927 131 ntBASIC1.41□□□□□ -2.18
Rnf220Q6PDX6 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Rnf220Q6PDX6 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Rnf220Q6PDX6 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Rnf220Q6PDX6 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.4□□□□□ -2.19
Rnf220Q6PDX6 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Rnf220Q6PDX6 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.4□□□□□ -2.19
Rnf220Q6PDX6 Gm22233-201ENSMUST00000157464 114 ntBASIC1.4□□□□□ -2.19
Rnf220Q6PDX6 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.4□□□□□ -2.19
Rnf220Q6PDX6 Gm23083-201ENSMUST00000157851 116 ntBASIC1.4□□□□□ -2.19
Rnf220Q6PDX6 Gm23221-201ENSMUST00000158118 93 ntBASIC1.4□□□□□ -2.19
Rnf220Q6PDX6 Gm25868-201ENSMUST00000158253 114 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 131.9 ms