Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Gm24494-201ENSMUST00000083804 81 ntBASIC1.52□□□□□ -2.17
Krt40Q6IFX3 Mir654-201ENSMUST00000104787 84 ntBASIC1.51□□□□□ -2.17
Krt40Q6IFX3 Gm24250-201ENSMUST00000157320 135 ntBASIC1.51□□□□□ -2.17
Krt40Q6IFX3 Gm22164-201ENSMUST00000158413 106 ntBASIC1.51□□□□□ -2.17
Krt40Q6IFX3 Gm22200-201ENSMUST00000158614 67 ntBASIC1.51□□□□□ -2.17
Krt40Q6IFX3 Gm23770-201ENSMUST00000178009 108 ntBASIC1.51□□□□□ -2.17
Krt40Q6IFX3 Gm22832-201ENSMUST00000178022 108 ntBASIC1.51□□□□□ -2.17
Krt40Q6IFX3 Gm23863-201ENSMUST00000178265 108 ntBASIC1.51□□□□□ -2.17
Krt40Q6IFX3 Gm24828-201ENSMUST00000178507 108 ntBASIC1.51□□□□□ -2.17
Krt40Q6IFX3 Gm23052-201ENSMUST00000178633 108 ntBASIC1.51□□□□□ -2.17
Krt40Q6IFX3 Gm25729-201ENSMUST00000179050 108 ntBASIC1.51□□□□□ -2.17
Krt40Q6IFX3 Gm25359-201ENSMUST00000179315 108 ntBASIC1.51□□□□□ -2.17
Krt40Q6IFX3 Gm22624-201ENSMUST00000179913 108 ntBASIC1.51□□□□□ -2.17
Krt40Q6IFX3 Mir8116-201ENSMUST00000184134 97 ntBASIC1.51□□□□□ -2.17
Krt40Q6IFX3 Gm27894-201ENSMUST00000184177 92 ntBASIC1.51□□□□□ -2.17
Krt40Q6IFX3 Gm44462-201ENSMUST00000199696 129 ntBASIC1.51□□□□□ -2.17
Krt40Q6IFX3 Gm44859-201ENSMUST00000207831 94 ntBASIC1.51□□□□□ -2.17
Krt40Q6IFX3 Snord96a-201ENSMUST00000082791 81 ntBASIC1.51□□□□□ -2.17
Krt40Q6IFX3 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.5□□□□□ -2.17
Krt40Q6IFX3 Gm22785-201ENSMUST00000104087 132 ntBASIC1.5□□□□□ -2.17
Krt40Q6IFX3 Gm23859-201ENSMUST00000158383 64 ntBASIC1.5□□□□□ -2.17
Krt40Q6IFX3 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC1.5□□□□□ -2.17
Krt40Q6IFX3 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.5□□□□□ -2.17
Krt40Q6IFX3 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
Krt40Q6IFX3 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Krt40Q6IFX3 Mir547-201ENSMUST00000102051 78 ntBASIC1.49□□□□□ -2.17
Krt40Q6IFX3 Mir669b-201ENSMUST00000102172 97 ntBASIC1.49□□□□□ -2.17
Krt40Q6IFX3 Gm26076-201ENSMUST00000104065 105 ntBASIC1.49□□□□□ -2.17
Krt40Q6IFX3 Gm14923-201ENSMUST00000118270 155 ntBASIC1.49□□□□□ -2.17
Krt40Q6IFX3 Gm23083-201ENSMUST00000157851 116 ntBASIC1.49□□□□□ -2.17
Krt40Q6IFX3 Gm25011-201ENSMUST00000158398 126 ntBASIC1.49□□□□□ -2.17
Krt40Q6IFX3 Gm26029-201ENSMUST00000158659 132 ntBASIC1.49□□□□□ -2.17
Krt40Q6IFX3 Gm27792-201ENSMUST00000184031 115 ntBASIC1.49□□□□□ -2.17
Krt40Q6IFX3 Gm28256-201ENSMUST00000188953 139 ntBASIC1.49□□□□□ -2.17
Krt40Q6IFX3 Gm28559-201ENSMUST00000190532 139 ntBASIC1.49□□□□□ -2.17
Krt40Q6IFX3 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.49□□□□□ -2.17
Krt40Q6IFX3 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.49□□□□□ -2.17
Krt40Q6IFX3 Gm23303-201ENSMUST00000082714 152 ntBASIC1.49□□□□□ -2.17
Krt40Q6IFX3 Mir410-201ENSMUST00000083563 81 ntBASIC1.49□□□□□ -2.17
Krt40Q6IFX3 Mir211-201ENSMUST00000083651 106 ntBASIC1.49□□□□□ -2.17
Krt40Q6IFX3 Gm24252-201ENSMUST00000083700 132 ntBASIC1.49□□□□□ -2.17
Krt40Q6IFX3 Mir489-201ENSMUST00000093599 107 ntBASIC1.49□□□□□ -2.17
Krt40Q6IFX3 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Krt40Q6IFX3 Gm22815-201ENSMUST00000157451 62 ntBASIC1.48□□□□□ -2.17
Krt40Q6IFX3 Gm25044-201ENSMUST00000158603 104 ntBASIC1.48□□□□□ -2.17
Krt40Q6IFX3 Gm26291-201ENSMUST00000158889 137 ntBASIC1.48□□□□□ -2.17
Krt40Q6IFX3 Gm23375-201ENSMUST00000175407 83 ntBASIC1.48□□□□□ -2.17
Krt40Q6IFX3 Gm23239-201ENSMUST00000083006 181 ntBASIC1.48□□□□□ -2.17
Krt40Q6IFX3 Gm26123-201ENSMUST00000083363 135 ntBASIC1.48□□□□□ -2.17
Krt40Q6IFX3 Gm22780-201ENSMUST00000104084 132 ntBASIC1.47□□□□□ -2.17
Krt40Q6IFX3 Gm44489-201ENSMUST00000104619 97 ntBASIC1.47□□□□□ -2.17
Krt40Q6IFX3 Gm16539-201ENSMUST00000160086 327 ntBASIC1.47□□□□□ -2.17
Krt40Q6IFX3 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
Krt40Q6IFX3 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.17
Krt40Q6IFX3 Mir466b-3-201ENSMUST00000103806 81 ntBASIC1.46□□□□□ -2.18
Krt40Q6IFX3 Gm22796-201ENSMUST00000157234 106 ntBASIC1.46□□□□□ -2.18
Krt40Q6IFX3 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
Krt40Q6IFX3 Gm14568-201ENSMUST00000119321 294 ntBASIC1.45□□□□□ -2.18
Krt40Q6IFX3 Gm23350-201ENSMUST00000158429 103 ntBASIC1.45□□□□□ -2.18
Krt40Q6IFX3 Gm16307-201ENSMUST00000161269 210 ntBASIC1.45□□□□□ -2.18
Krt40Q6IFX3 Gm25241-201ENSMUST00000174909 84 ntBASIC1.45□□□□□ -2.18
Krt40Q6IFX3 Snora24-201ENSMUST00000174989 130 ntBASIC1.45□□□□□ -2.18
Krt40Q6IFX3 Gm23636-201ENSMUST00000175070 95 ntBASIC1.45□□□□□ -2.18
Krt40Q6IFX3 Gm26217-201ENSMUST00000175212 84 ntBASIC1.45□□□□□ -2.18
Krt40Q6IFX3 Mir6928-201ENSMUST00000185166 70 ntBASIC1.45□□□□□ -2.18
Krt40Q6IFX3 Gm44470-201ENSMUST00000203913 142 ntBASIC1.45□□□□□ -2.18
Krt40Q6IFX3 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC1.45□□□□□ -2.18
Krt40Q6IFX3 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Krt40Q6IFX3 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.44□□□□□ -2.18
Krt40Q6IFX3 Gm24915-201ENSMUST00000157288 78 ntBASIC1.44□□□□□ -2.18
Krt40Q6IFX3 Gm22966-201ENSMUST00000157957 129 ntBASIC1.44□□□□□ -2.18
Krt40Q6IFX3 Gm23445-201ENSMUST00000082800 107 ntBASIC1.44□□□□□ -2.18
Krt40Q6IFX3 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.44□□□□□ -2.18
Krt40Q6IFX3 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Krt40Q6IFX3 Gm26082-201ENSMUST00000104070 127 ntBASIC1.43□□□□□ -2.18
Krt40Q6IFX3 Gm22384-201ENSMUST00000158187 104 ntBASIC1.43□□□□□ -2.18
Krt40Q6IFX3 Gm22425-201ENSMUST00000158532 138 ntBASIC1.43□□□□□ -2.18
Krt40Q6IFX3 Traj60-201ENSMUST00000167781 54 ntBASIC1.43□□□□□ -2.18
Krt40Q6IFX3 Gm25071-201ENSMUST00000175232 70 ntBASIC1.43□□□□□ -2.18
Krt40Q6IFX3 Gm26337-201ENSMUST00000178000 79 ntBASIC1.43□□□□□ -2.18
Krt40Q6IFX3 Gm27446-201ENSMUST00000183963 89 ntBASIC1.43□□□□□ -2.18
Krt40Q6IFX3 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC1.43□□□□□ -2.18
Krt40Q6IFX3 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.43□□□□□ -2.18
Krt40Q6IFX3 Gm24588-201ENSMUST00000116696 83 ntBASIC1.42□□□□□ -2.18
Krt40Q6IFX3 Gm14626-201ENSMUST00000117619 216 ntBASIC1.42□□□□□ -2.18
Krt40Q6IFX3 Gm24141-201ENSMUST00000122776 115 ntBASIC1.42□□□□□ -2.18
Krt40Q6IFX3 Gm22332-201ENSMUST00000158072 126 ntBASIC1.42□□□□□ -2.18
Krt40Q6IFX3 Gm23260-201ENSMUST00000158317 172 ntBASIC1.42□□□□□ -2.18
Krt40Q6IFX3 Gm24154-201ENSMUST00000175261 130 ntBASIC1.42□□□□□ -2.18
Krt40Q6IFX3 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Krt40Q6IFX3 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.42□□□□□ -2.18
Krt40Q6IFX3 Gm24461-201ENSMUST00000082735 103 ntBASIC1.42□□□□□ -2.18
Krt40Q6IFX3 Gm25992-201ENSMUST00000102437 109 ntBASIC1.41□□□□□ -2.18
Krt40Q6IFX3 Gm14946-201ENSMUST00000119859 296 ntBASIC1.41□□□□□ -2.18
Krt40Q6IFX3 Gm26084-201ENSMUST00000157903 104 ntBASIC1.41□□□□□ -2.18
Krt40Q6IFX3 Gm43898-201ENSMUST00000204456 424 ntBASIC1.41□□□□□ -2.18
Krt40Q6IFX3 Gm26224-201ENSMUST00000082506 80 ntBASIC1.41□□□□□ -2.18
Krt40Q6IFX3 Gm23509-201ENSMUST00000083080 160 ntBASIC1.41□□□□□ -2.18
Krt40Q6IFX3 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.4□□□□□ -2.18
Krt40Q6IFX3 Gm25915-201ENSMUST00000104265 126 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 144.7 ms