Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm44489-201ENSMUST00000104619 97 ntBASIC1.42□□□□□ -2.18
Ift88Q61371 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.42□□□□□ -2.18
Ift88Q61371 Gm25011-201ENSMUST00000158398 126 ntBASIC1.42□□□□□ -2.18
Ift88Q61371 Gm25241-201ENSMUST00000174909 84 ntBASIC1.42□□□□□ -2.18
Ift88Q61371 Gm26217-201ENSMUST00000175212 84 ntBASIC1.42□□□□□ -2.18
Ift88Q61371 Gm23289-201ENSMUST00000175615 108 ntBASIC1.42□□□□□ -2.18
Ift88Q61371 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.42□□□□□ -2.18
Ift88Q61371 Gm23722-201ENSMUST00000083002 130 ntBASIC1.42□□□□□ -2.18
Ift88Q61371 Snord13-201ENSMUST00000157627 104 ntBASIC1.41□□□□□ -2.18
Ift88Q61371 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.41□□□□□ -2.18
Ift88Q61371 Gm16399-201ENSMUST00000181423 219 ntBASIC1.41□□□□□ -2.18
Ift88Q61371 Gm44470-201ENSMUST00000203913 142 ntBASIC1.41□□□□□ -2.18
Ift88Q61371 Gm44859-201ENSMUST00000207831 94 ntBASIC1.41□□□□□ -2.18
Ift88Q61371 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.41□□□□□ -2.18
Ift88Q61371 AC124739.2-201ENSMUST00000222201 109 ntBASIC1.41□□□□□ -2.18
Ift88Q61371 Mir411-201ENSMUST00000083543 82 ntBASIC1.41□□□□□ -2.18
Ift88Q61371 Gm14882-201ENSMUST00000117216 218 ntBASIC1.4□□□□□ -2.19
Ift88Q61371 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.4□□□□□ -2.19
Ift88Q61371 Gm24915-201ENSMUST00000157288 78 ntBASIC1.4□□□□□ -2.19
Ift88Q61371 Gm22425-201ENSMUST00000158532 138 ntBASIC1.4□□□□□ -2.19
Ift88Q61371 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Ift88Q61371 Gm45268-201ENSMUST00000210046 370 ntBASIC1.4□□□□□ -2.19
Ift88Q61371 Gm26123-201ENSMUST00000083363 135 ntBASIC1.4□□□□□ -2.19
Ift88Q61371 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Ift88Q61371 Gm25611-201ENSMUST00000104017 133 ntBASIC1.39□□□□□ -2.19
Ift88Q61371 Gm25060-201ENSMUST00000157374 130 ntBASIC1.39□□□□□ -2.19
Ift88Q61371 Mir7225-201ENSMUST00000184178 54 ntBASIC1.39□□□□□ -2.19
Ift88Q61371 Mir6905-201ENSMUST00000184228 70 ntBASIC1.39□□□□□ -2.19
Ift88Q61371 Gm25636-201ENSMUST00000082666 133 ntBASIC1.39□□□□□ -2.19
Ift88Q61371 Gm26011-201ENSMUST00000104410 104 ntBASIC1.38□□□□□ -2.19
Ift88Q61371 Gm24141-201ENSMUST00000122776 115 ntBASIC1.38□□□□□ -2.19
Ift88Q61371 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC1.38□□□□□ -2.19
Ift88Q61371 Gm22349-201ENSMUST00000157864 107 ntBASIC1.38□□□□□ -2.19
Ift88Q61371 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.38□□□□□ -2.19
Ift88Q61371 Mir211-201ENSMUST00000083651 106 ntBASIC1.38□□□□□ -2.19
Ift88Q61371 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Ift88Q61371 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Ift88Q61371 Gm25938-201ENSMUST00000104139 166 ntBASIC1.37□□□□□ -2.19
Ift88Q61371 Gm25831-201ENSMUST00000158924 163 ntBASIC1.37□□□□□ -2.19
Ift88Q61371 Gm23339-201ENSMUST00000158962 139 ntBASIC1.37□□□□□ -2.19
Ift88Q61371 Gm23504-201ENSMUST00000158988 95 ntBASIC1.37□□□□□ -2.19
Ift88Q61371 Gm44483-201ENSMUST00000197203 97 ntBASIC1.37□□□□□ -2.19
Ift88Q61371 Gm44462-201ENSMUST00000199696 129 ntBASIC1.37□□□□□ -2.19
Ift88Q61371 Gm25377-201ENSMUST00000104334 129 ntBASIC1.36□□□□□ -2.19
Ift88Q61371 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Ift88Q61371 Gm22556-201ENSMUST00000157803 100 ntBASIC1.36□□□□□ -2.19
Ift88Q61371 Gm22485-201ENSMUST00000157990 109 ntBASIC1.36□□□□□ -2.19
Ift88Q61371 Gm26291-201ENSMUST00000158889 137 ntBASIC1.36□□□□□ -2.19
Ift88Q61371 Gm26337-201ENSMUST00000178000 79 ntBASIC1.36□□□□□ -2.19
Ift88Q61371 Gm27898-201ENSMUST00000183987 80 ntBASIC1.36□□□□□ -2.19
Ift88Q61371 Gm42795-201ENSMUST00000198847 76 ntBASIC1.36□□□□□ -2.19
Ift88Q61371 Gm44396-201ENSMUST00000199843 114 ntBASIC1.36□□□□□ -2.19
Ift88Q61371 Gm23239-201ENSMUST00000083006 181 ntBASIC1.36□□□□□ -2.19
Ift88Q61371 Gm23509-201ENSMUST00000083080 160 ntBASIC1.36□□□□□ -2.19
Ift88Q61371 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.36□□□□□ -2.19
Ift88Q61371 Mir466b-3-201ENSMUST00000103806 81 ntBASIC1.35□□□□□ -2.19
Ift88Q61371 Gm11857-201ENSMUST00000119817 324 ntBASIC1.35□□□□□ -2.19
Ift88Q61371 Gm23114-201ENSMUST00000158478 117 ntBASIC1.35□□□□□ -2.19
Ift88Q61371 Gm27446-201ENSMUST00000183963 89 ntBASIC1.35□□□□□ -2.19
Ift88Q61371 Gm26224-201ENSMUST00000082506 80 ntBASIC1.35□□□□□ -2.19
Ift88Q61371 Gm22809-201ENSMUST00000082743 156 ntBASIC1.35□□□□□ -2.19
Ift88Q61371 Gm23377-201ENSMUST00000082943 126 ntBASIC1.35□□□□□ -2.19
Ift88Q61371 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Ift88Q61371 Gm25495-201ENSMUST00000104431 131 ntBASIC1.34□□□□□ -2.19
Ift88Q61371 Gm14946-201ENSMUST00000119859 296 ntBASIC1.34□□□□□ -2.19
Ift88Q61371 Gm24717-201ENSMUST00000157522 124 ntBASIC1.34□□□□□ -2.19
Ift88Q61371 Gm23922-201ENSMUST00000178792 79 ntBASIC1.34□□□□□ -2.19
Ift88Q61371 Gm24657-201ENSMUST00000180085 79 ntBASIC1.34□□□□□ -2.19
Ift88Q61371 Gm22996-201ENSMUST00000180236 79 ntBASIC1.34□□□□□ -2.19
Ift88Q61371 Mir6377-201ENSMUST00000183760 114 ntBASIC1.34□□□□□ -2.19
Ift88Q61371 Gm25814-201ENSMUST00000082754 107 ntBASIC1.34□□□□□ -2.19
Ift88Q61371 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Ift88Q61371 Mir301b-201ENSMUST00000102333 97 ntBASIC1.33□□□□□ -2.2
Ift88Q61371 Gm23907-201ENSMUST00000104595 189 ntBASIC1.33□□□□□ -2.2
Ift88Q61371 Gm22815-201ENSMUST00000157451 62 ntBASIC1.33□□□□□ -2.2
Ift88Q61371 Gm24808-201ENSMUST00000157993 118 ntBASIC1.33□□□□□ -2.2
Ift88Q61371 Gm23350-201ENSMUST00000158429 103 ntBASIC1.33□□□□□ -2.2
Ift88Q61371 Gm20409-201ENSMUST00000173457 130 ntBASIC1.33□□□□□ -2.2
Ift88Q61371 Gm22862-201ENSMUST00000178593 121 ntBASIC1.33□□□□□ -2.2
Ift88Q61371 Gm27420-201ENSMUST00000183823 79 ntBASIC1.33□□□□□ -2.2
Ift88Q61371 Mir468-201ENSMUST00000197332 78 ntBASIC1.33□□□□□ -2.2
Ift88Q61371 Gm45492-201ENSMUST00000211611 288 ntBASIC1.33□□□□□ -2.2
Ift88Q61371 AC164561.1-201ENSMUST00000220414 115 ntBASIC1.33□□□□□ -2.2
Ift88Q61371 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.33□□□□□ -2.2
Ift88Q61371 Gm22980-201ENSMUST00000082608 70 ntBASIC1.33□□□□□ -2.2
Ift88Q61371 Gm24238-201ENSMUST00000157792 98 ntBASIC1.32□□□□□ -2.2
Ift88Q61371 Gm22551-201ENSMUST00000157795 103 ntBASIC1.32□□□□□ -2.2
Ift88Q61371 Gm22966-201ENSMUST00000157957 129 ntBASIC1.32□□□□□ -2.2
Ift88Q61371 Gm24902-201ENSMUST00000158126 123 ntBASIC1.32□□□□□ -2.2
Ift88Q61371 Gm23760-201ENSMUST00000158350 116 ntBASIC1.32□□□□□ -2.2
Ift88Q61371 Gm16307-201ENSMUST00000161269 210 ntBASIC1.32□□□□□ -2.2
Ift88Q61371 Mir3094-201ENSMUST00000175121 64 ntBASIC1.32□□□□□ -2.2
Ift88Q61371 Gm43898-201ENSMUST00000204456 424 ntBASIC1.32□□□□□ -2.2
Ift88Q61371 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.32□□□□□ -2.2
Ift88Q61371 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.32□□□□□ -2.2
Ift88Q61371 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Ift88Q61371 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Ift88Q61371 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Ift88Q61371 Gm25915-201ENSMUST00000104265 126 ntBASIC1.31□□□□□ -2.2
Ift88Q61371 Gm22559-201ENSMUST00000157329 134 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms