Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm22302-201ENSMUST00000082657 106 ntBASIC0.41□□□□□ -2.34
Usf1Q61069 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.41□□□□□ -2.34
Usf1Q61069 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.41□□□□□ -2.34
Usf1Q61069 Gm25110-201ENSMUST00000116684 121 ntBASIC0.4□□□□□ -2.35
Usf1Q61069 Gm25775-201ENSMUST00000116716 121 ntBASIC0.4□□□□□ -2.35
Usf1Q61069 Gm24795-201ENSMUST00000116737 121 ntBASIC0.4□□□□□ -2.35
Usf1Q61069 Gm25171-201ENSMUST00000116926 121 ntBASIC0.4□□□□□ -2.35
Usf1Q61069 Gm14884-201ENSMUST00000120456 196 ntBASIC0.4□□□□□ -2.35
Usf1Q61069 Gm25362-201ENSMUST00000158854 105 ntBASIC0.4□□□□□ -2.35
Usf1Q61069 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.4□□□□□ -2.35
Usf1Q61069 Gm23416-201ENSMUST00000175520 95 ntBASIC0.4□□□□□ -2.35
Usf1Q61069 Gm38019-201ENSMUST00000195133 380 ntBASIC0.4□□□□□ -2.35
Usf1Q61069 Gm26123-201ENSMUST00000083363 135 ntBASIC0.4□□□□□ -2.35
Usf1Q61069 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.4□□□□□ -2.35
Usf1Q61069 Gm23763-201ENSMUST00000158345 60 ntBASIC0.39□□□□□ -2.35
Usf1Q61069 Gm25267-201ENSMUST00000158522 63 ntBASIC0.39□□□□□ -2.35
Usf1Q61069 Gm27672-201ENSMUST00000183751 204 ntBASIC0.39□□□□□ -2.35
Usf1Q61069 Gm24460-201ENSMUST00000082731 106 ntBASIC0.39□□□□□ -2.35
Usf1Q61069 Gm25318-201ENSMUST00000122554 314 ntBASIC0.38□□□□□ -2.35
Usf1Q61069 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.38□□□□□ -2.35
Usf1Q61069 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.38□□□□□ -2.35
Usf1Q61069 Gm43944-201ENSMUST00000205220 120 ntBASIC0.38□□□□□ -2.35
Usf1Q61069 Gm25814-201ENSMUST00000082754 107 ntBASIC0.38□□□□□ -2.35
Usf1Q61069 Gm24929-201ENSMUST00000083403 139 ntBASIC0.38□□□□□ -2.35
Usf1Q61069 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
Usf1Q61069 Gm22759-201ENSMUST00000102276 96 ntBASIC0.37□□□□□ -2.35
Usf1Q61069 Snord69-201ENSMUST00000104024 80 ntBASIC0.37□□□□□ -2.35
Usf1Q61069 Gm26076-201ENSMUST00000104065 105 ntBASIC0.37□□□□□ -2.35
Usf1Q61069 Gm22999-201ENSMUST00000157082 88 ntBASIC0.37□□□□□ -2.35
Usf1Q61069 Gm24963-201ENSMUST00000157916 144 ntBASIC0.37□□□□□ -2.35
Usf1Q61069 Gm27585-201ENSMUST00000183717 199 ntBASIC0.37□□□□□ -2.35
Usf1Q61069 Gm6003-201ENSMUST00000187903 463 ntBASIC0.37□□□□□ -2.35
Usf1Q61069 Gm43432-201ENSMUST00000196352 121 ntBASIC0.37□□□□□ -2.35
Usf1Q61069 Gm19790-201ENSMUST00000214414 251 ntBASIC0.37□□□□□ -2.35
Usf1Q61069 Gm14039-201ENSMUST00000118705 101 ntBASIC0.36□□□□□ -2.35
Usf1Q61069 Gm14883-201ENSMUST00000120179 157 ntBASIC0.36□□□□□ -2.35
Usf1Q61069 Gm13345-201ENSMUST00000121928 228 ntBASIC0.36□□□□□ -2.35
Usf1Q61069 Gm26026-201ENSMUST00000122726 123 ntBASIC0.36□□□□□ -2.35
Usf1Q61069 Gm24509-201ENSMUST00000157086 101 ntBASIC0.36□□□□□ -2.35
Usf1Q61069 Gm25358-201ENSMUST00000157189 101 ntBASIC0.36□□□□□ -2.35
Usf1Q61069 Gm24549-201ENSMUST00000158647 139 ntBASIC0.36□□□□□ -2.35
Usf1Q61069 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.36□□□□□ -2.35
Usf1Q61069 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.36□□□□□ -2.35
Usf1Q61069 Mir384-201ENSMUST00000083565 88 ntBASIC0.36□□□□□ -2.35
Usf1Q61069 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.36□□□□□ -2.35
Usf1Q61069 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
Usf1Q61069 Gm22048-201ENSMUST00000104721 89 ntBASIC0.35□□□□□ -2.35
Usf1Q61069 Gm15289-201ENSMUST00000117793 244 ntBASIC0.35□□□□□ -2.35
Usf1Q61069 Gm25771-201ENSMUST00000158565 144 ntBASIC0.35□□□□□ -2.35
Usf1Q61069 Gm22466-201ENSMUST00000175278 69 ntBASIC0.35□□□□□ -2.35
Usf1Q61069 Mir146-201ENSMUST00000083667 65 ntBASIC0.35□□□□□ -2.35
Usf1Q61069 Mir710-201ENSMUST00000102088 110 ntBASIC0.34□□□□□ -2.36
Usf1Q61069 Mir881-201ENSMUST00000104844 78 ntBASIC0.34□□□□□ -2.36
Usf1Q61069 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.34□□□□□ -2.36
Usf1Q61069 Gm25393-201ENSMUST00000157336 285 ntBASIC0.34□□□□□ -2.36
Usf1Q61069 Gm25720-201ENSMUST00000157503 105 ntBASIC0.34□□□□□ -2.36
Usf1Q61069 Gm25718-201ENSMUST00000158632 118 ntBASIC0.34□□□□□ -2.36
Usf1Q61069 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.34□□□□□ -2.36
Usf1Q61069 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.34□□□□□ -2.36
Usf1Q61069 Gm26116-201ENSMUST00000175600 77 ntBASIC0.34□□□□□ -2.36
Usf1Q61069 Gm23969-201ENSMUST00000083324 74 ntBASIC0.34□□□□□ -2.36
Usf1Q61069 Gm25611-201ENSMUST00000104017 133 ntBASIC0.33□□□□□ -2.36
Usf1Q61069 Gm24867-201ENSMUST00000104161 107 ntBASIC0.33□□□□□ -2.36
Usf1Q61069 Gm23987-201ENSMUST00000117039 129 ntBASIC0.33□□□□□ -2.36
Usf1Q61069 Gm14567-201ENSMUST00000117155 174 ntBASIC0.33□□□□□ -2.36
Usf1Q61069 Gm12837-201ENSMUST00000120131 373 ntBASIC0.33□□□□□ -2.36
Usf1Q61069 Gm12815-201ENSMUST00000121737 135 ntBASIC0.33□□□□□ -2.36
Usf1Q61069 Gm22815-201ENSMUST00000157451 62 ntBASIC0.33□□□□□ -2.36
Usf1Q61069 Gm25885-201ENSMUST00000157779 109 ntBASIC0.33□□□□□ -2.36
Usf1Q61069 Gm25494-201ENSMUST00000158143 100 ntBASIC0.33□□□□□ -2.36
Usf1Q61069 Gm24728-201ENSMUST00000158226 125 ntBASIC0.33□□□□□ -2.36
Usf1Q61069 Gm38364-201ENSMUST00000191814 179 ntBASIC0.33□□□□□ -2.36
Usf1Q61069 Gm26326-201ENSMUST00000083070 129 ntBASIC0.33□□□□□ -2.36
Usf1Q61069 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
Usf1Q61069 Snord100-201ENSMUST00000116836 74 ntBASIC0.32□□□□□ -2.36
Usf1Q61069 Gm26160-201ENSMUST00000158965 63 ntBASIC0.32□□□□□ -2.36
Usf1Q61069 Gm25464-201ENSMUST00000175481 107 ntBASIC0.32□□□□□ -2.36
Usf1Q61069 mt-Ti-201ENSMUST00000082393 69 ntBASIC0.32□□□□□ -2.36
Usf1Q61069 Mir532-201ENSMUST00000093630 96 ntBASIC0.32□□□□□ -2.36
Usf1Q61069 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.31□□□□□ -2.36
Usf1Q61069 Gm23989-201ENSMUST00000117030 66 ntBASIC0.31□□□□□ -2.36
Usf1Q61069 Gm6952-201ENSMUST00000118629 159 ntBASIC0.31□□□□□ -2.36
Usf1Q61069 Gm28020-201ENSMUST00000157739 67 ntBASIC0.31□□□□□ -2.36
Usf1Q61069 Gm25300-201ENSMUST00000175284 84 ntBASIC0.31□□□□□ -2.36
Usf1Q61069 AC165157.3-201ENSMUST00000220815 103 ntBASIC0.31□□□□□ -2.36
Usf1Q61069 Gm26303-201ENSMUST00000116845 119 ntBASIC0.3□□□□□ -2.36
Usf1Q61069 Gm24500-201ENSMUST00000158447 124 ntBASIC0.3□□□□□ -2.36
Usf1Q61069 Gm27905-201ENSMUST00000184005 207 ntBASIC0.3□□□□□ -2.36
Usf1Q61069 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.3□□□□□ -2.36
Usf1Q61069 Gm45859-201ENSMUST00000212794 214 ntBASIC0.3□□□□□ -2.36
Usf1Q61069 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.3□□□□□ -2.36
Usf1Q61069 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.3□□□□□ -2.36
Usf1Q61069 Gm22576-201ENSMUST00000083733 104 ntBASIC0.3□□□□□ -2.36
Usf1Q61069 Gm23841-201ENSMUST00000116951 114 ntBASIC0.29□□□□□ -2.36
Usf1Q61069 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.29□□□□□ -2.36
Usf1Q61069 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.29□□□□□ -2.36
Usf1Q61069 Gm23838-201ENSMUST00000158067 162 ntBASIC0.29□□□□□ -2.36
Usf1Q61069 Gm25223-201ENSMUST00000158200 110 ntBASIC0.29□□□□□ -2.36
Usf1Q61069 Gm22983-201ENSMUST00000158308 104 ntBASIC0.29□□□□□ -2.36
Usf1Q61069 Gm24415-201ENSMUST00000180218 107 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 134.3 ms