Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.17□□□□□ -2.22
ClpbQ60649 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
ClpbQ60649 Gm23988-201ENSMUST00000117034 122 ntBASIC1.16□□□□□ -2.22
ClpbQ60649 Gm24250-201ENSMUST00000157320 135 ntBASIC1.16□□□□□ -2.22
ClpbQ60649 Gm17020-201ENSMUST00000172274 274 ntBASIC1.16□□□□□ -2.22
ClpbQ60649 Gm23770-201ENSMUST00000178009 108 ntBASIC1.16□□□□□ -2.22
ClpbQ60649 Gm22832-201ENSMUST00000178022 108 ntBASIC1.16□□□□□ -2.22
ClpbQ60649 Gm23863-201ENSMUST00000178265 108 ntBASIC1.16□□□□□ -2.22
ClpbQ60649 Gm24828-201ENSMUST00000178507 108 ntBASIC1.16□□□□□ -2.22
ClpbQ60649 Gm23052-201ENSMUST00000178633 108 ntBASIC1.16□□□□□ -2.22
ClpbQ60649 Gm22129-201ENSMUST00000179034 107 ntBASIC1.16□□□□□ -2.22
ClpbQ60649 Gm25729-201ENSMUST00000179050 108 ntBASIC1.16□□□□□ -2.22
ClpbQ60649 Gm25359-201ENSMUST00000179315 108 ntBASIC1.16□□□□□ -2.22
ClpbQ60649 Gm22624-201ENSMUST00000179913 108 ntBASIC1.16□□□□□ -2.22
ClpbQ60649 Gm27928-201ENSMUST00000183747 256 ntBASIC1.16□□□□□ -2.22
ClpbQ60649 Mir7059-201ENSMUST00000184825 59 ntBASIC1.16□□□□□ -2.22
ClpbQ60649 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.16□□□□□ -2.22
ClpbQ60649 Gm22809-201ENSMUST00000082743 156 ntBASIC1.16□□□□□ -2.22
ClpbQ60649 Gm25851-201ENSMUST00000082794 107 ntBASIC1.16□□□□□ -2.22
ClpbQ60649 Snord61-201ENSMUST00000083176 71 ntBASIC1.16□□□□□ -2.22
ClpbQ60649 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.15□□□□□ -2.22
ClpbQ60649 Gm25611-201ENSMUST00000104017 133 ntBASIC1.15□□□□□ -2.23
ClpbQ60649 Gm26029-201ENSMUST00000158659 132 ntBASIC1.15□□□□□ -2.23
ClpbQ60649 Gm22944-201ENSMUST00000158662 133 ntBASIC1.15□□□□□ -2.23
ClpbQ60649 Gm23337-201ENSMUST00000158959 118 ntBASIC1.15□□□□□ -2.23
ClpbQ60649 Gm24106-201ENSMUST00000175498 127 ntBASIC1.15□□□□□ -2.23
ClpbQ60649 Gm27699-201ENSMUST00000183553 180 ntBASIC1.15□□□□□ -2.23
ClpbQ60649 Trav5-2-201ENSMUST00000199855 280 ntBASIC1.15□□□□□ -2.23
ClpbQ60649 Gm45268-201ENSMUST00000210046 370 ntBASIC1.15□□□□□ -2.23
ClpbQ60649 Gm23245-201ENSMUST00000083370 135 ntBASIC1.15□□□□□ -2.23
ClpbQ60649 Gm24252-201ENSMUST00000083700 132 ntBASIC1.15□□□□□ -2.23
ClpbQ60649 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
ClpbQ60649 Gm24271-201ENSMUST00000102327 111 ntBASIC1.14□□□□□ -2.23
ClpbQ60649 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.14□□□□□ -2.23
ClpbQ60649 Gm23636-201ENSMUST00000175070 95 ntBASIC1.14□□□□□ -2.23
ClpbQ60649 Mir3968-201ENSMUST00000175355 100 ntBASIC1.14□□□□□ -2.23
ClpbQ60649 Mir468-201ENSMUST00000197332 78 ntBASIC1.14□□□□□ -2.23
ClpbQ60649 Gm43898-201ENSMUST00000204456 424 ntBASIC1.14□□□□□ -2.23
ClpbQ60649 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC1.14□□□□□ -2.23
ClpbQ60649 Gm8219-201ENSMUST00000218309 242 ntBASIC1.14□□□□□ -2.23
ClpbQ60649 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
ClpbQ60649 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.13□□□□□ -2.23
ClpbQ60649 Gm22233-201ENSMUST00000157464 114 ntBASIC1.13□□□□□ -2.23
ClpbQ60649 Gm25868-201ENSMUST00000158253 114 ntBASIC1.13□□□□□ -2.23
ClpbQ60649 Gm22074-201ENSMUST00000158595 113 ntBASIC1.13□□□□□ -2.23
ClpbQ60649 Gm24054-201ENSMUST00000158619 105 ntBASIC1.13□□□□□ -2.23
ClpbQ60649 Mir1961-201ENSMUST00000158643 112 ntBASIC1.13□□□□□ -2.23
ClpbQ60649 Gm22911-201ENSMUST00000177920 107 ntBASIC1.13□□□□□ -2.23
ClpbQ60649 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.13□□□□□ -2.23
ClpbQ60649 Gm26123-201ENSMUST00000083363 135 ntBASIC1.13□□□□□ -2.23
ClpbQ60649 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
ClpbQ60649 Gm25980-201ENSMUST00000157176 218 ntBASIC1.12□□□□□ -2.23
ClpbQ60649 Gm22425-201ENSMUST00000158532 138 ntBASIC1.12□□□□□ -2.23
ClpbQ60649 Mir7063-201ENSMUST00000184158 91 ntBASIC1.12□□□□□ -2.23
ClpbQ60649 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
ClpbQ60649 Ighv15-1-201ENSMUST00000194450 276 ntBASIC1.12□□□□□ -2.23
ClpbQ60649 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC1.12□□□□□ -2.23
ClpbQ60649 Gm22980-201ENSMUST00000082608 70 ntBASIC1.12□□□□□ -2.23
ClpbQ60649 Mir411-201ENSMUST00000083543 82 ntBASIC1.12□□□□□ -2.23
ClpbQ60649 Mir547-201ENSMUST00000102051 78 ntBASIC1.11□□□□□ -2.23
ClpbQ60649 Gm23328-201ENSMUST00000157418 132 ntBASIC1.11□□□□□ -2.23
ClpbQ60649 Gm22699-201ENSMUST00000175376 105 ntBASIC1.11□□□□□ -2.23
ClpbQ60649 Gm18213-201ENSMUST00000207850 178 ntBASIC1.11□□□□□ -2.23
ClpbQ60649 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.11□□□□□ -2.23
ClpbQ60649 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
ClpbQ60649 Gm14502-201ENSMUST00000118154 113 ntBASIC1.1□□□□□ -2.23
ClpbQ60649 Mir1904-201ENSMUST00000122702 80 ntBASIC1.1□□□□□ -2.23
ClpbQ60649 Gm22079-201ENSMUST00000157592 106 ntBASIC1.1□□□□□ -2.23
ClpbQ60649 Gm22332-201ENSMUST00000158072 126 ntBASIC1.1□□□□□ -2.23
ClpbQ60649 Gm23859-201ENSMUST00000158383 64 ntBASIC1.1□□□□□ -2.23
ClpbQ60649 Gm22139-201ENSMUST00000158747 105 ntBASIC1.1□□□□□ -2.23
ClpbQ60649 Gm26363-201ENSMUST00000158866 83 ntBASIC1.1□□□□□ -2.23
ClpbQ60649 Mir6928-201ENSMUST00000185166 70 ntBASIC1.1□□□□□ -2.23
ClpbQ60649 Gm44948-201ENSMUST00000209050 149 ntBASIC1.1□□□□□ -2.23
ClpbQ60649 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
ClpbQ60649 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.1□□□□□ -2.23
ClpbQ60649 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
ClpbQ60649 Gm24683-201ENSMUST00000104840 88 ntBASIC1.09□□□□□ -2.23
ClpbQ60649 Gm26089-201ENSMUST00000157898 107 ntBASIC1.09□□□□□ -2.23
ClpbQ60649 Gm22515-201ENSMUST00000158273 305 ntBASIC1.09□□□□□ -2.23
ClpbQ60649 Gm25768-201ENSMUST00000158570 98 ntBASIC1.09□□□□□ -2.23
ClpbQ60649 Mir7091-201ENSMUST00000184075 79 ntBASIC1.09□□□□□ -2.23
ClpbQ60649 Gm18665-201ENSMUST00000189783 270 ntBASIC1.09□□□□□ -2.23
ClpbQ60649 AL627387.1-201ENSMUST00000226063 250 ntBASIC1.09□□□□□ -2.23
ClpbQ60649 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.09□□□□□ -2.23
ClpbQ60649 Gm25136-201ENSMUST00000083253 115 ntBASIC1.09□□□□□ -2.23
ClpbQ60649 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.09□□□□□ -2.24
ClpbQ60649 Gm23130-201ENSMUST00000104252 74 ntBASIC1.08□□□□□ -2.24
ClpbQ60649 Gm22373-201ENSMUST00000104584 89 ntBASIC1.08□□□□□ -2.24
ClpbQ60649 Gm22887-201ENSMUST00000178586 107 ntBASIC1.08□□□□□ -2.24
ClpbQ60649 AC150901.1-201ENSMUST00000208407 145 ntBASIC1.08□□□□□ -2.24
ClpbQ60649 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC1.08□□□□□ -2.24
ClpbQ60649 Snora41-201ENSMUST00000082668 132 ntBASIC1.08□□□□□ -2.24
ClpbQ60649 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
ClpbQ60649 Gm23320-201ENSMUST00000104462 127 ntBASIC1.07□□□□□ -2.24
ClpbQ60649 Gm22815-201ENSMUST00000157451 62 ntBASIC1.07□□□□□ -2.24
ClpbQ60649 Gm23760-201ENSMUST00000158350 116 ntBASIC1.07□□□□□ -2.24
ClpbQ60649 Gm25069-201ENSMUST00000175238 86 ntBASIC1.07□□□□□ -2.24
ClpbQ60649 Mir7052-201ENSMUST00000184821 65 ntBASIC1.07□□□□□ -2.24
ClpbQ60649 Mir3969-201ENSMUST00000197106 92 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 113.7 ms