Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-1.37□□□□□ -2.63
Trav3-1Q5R1I8 Gm22578-201ENSMUST00000083730 107 ntBASIC-1.37□□□□□ -2.63
Trav3-1Q5R1I8 Gm22105-201ENSMUST00000116734 116 ntBASIC-1.38□□□□□ -2.63
Trav3-1Q5R1I8 Gm25522-201ENSMUST00000158394 105 ntBASIC-1.38□□□□□ -2.63
Trav3-1Q5R1I8 Gm24129-201ENSMUST00000158537 97 ntBASIC-1.38□□□□□ -2.63
Trav3-1Q5R1I8 Gm43927-201ENSMUST00000204599 117 ntBASIC-1.38□□□□□ -2.63
Trav3-1Q5R1I8 AC132615.1-201ENSMUST00000213873 255 ntBASIC-1.38□□□□□ -2.63
Trav3-1Q5R1I8 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-1.38□□□□□ -2.63
Trav3-1Q5R1I8 Gm25859-201ENSMUST00000083710 91 ntBASIC-1.38□□□□□ -2.63
Trav3-1Q5R1I8 Snord42b-201ENSMUST00000083742 69 ntBASIC-1.38□□□□□ -2.63
Trav3-1Q5R1I8 Gm22319-201ENSMUST00000157147 122 ntBASIC-1.39□□□□□ -2.63
Trav3-1Q5R1I8 Gm26133-201ENSMUST00000157363 100 ntBASIC-1.39□□□□□ -2.63
Trav3-1Q5R1I8 Gm24467-201ENSMUST00000157887 126 ntBASIC-1.39□□□□□ -2.63
Trav3-1Q5R1I8 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC-1.39□□□□□ -2.63
Trav3-1Q5R1I8 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC-1.39□□□□□ -2.63
Trav3-1Q5R1I8 Gm23148-201ENSMUST00000180367 107 ntBASIC-1.39□□□□□ -2.63
Trav3-1Q5R1I8 Mir145b-201ENSMUST00000184434 75 ntBASIC-1.39□□□□□ -2.63
Trav3-1Q5R1I8 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-1.39□□□□□ -2.63
Trav3-1Q5R1I8 Mir376a-201ENSMUST00000197584 68 ntBASIC-1.39□□□□□ -2.63
Trav3-1Q5R1I8 Gm43381-201ENSMUST00000198553 165 ntBASIC-1.39□□□□□ -2.63
Trav3-1Q5R1I8 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC-1.39□□□□□ -2.63
Trav3-1Q5R1I8 Gm25258-201ENSMUST00000083049 107 ntBASIC-1.39□□□□□ -2.63
Trav3-1Q5R1I8 Gm24250-201ENSMUST00000157320 135 ntBASIC-1.4□□□□□ -2.63
Trav3-1Q5R1I8 Gm23715-201ENSMUST00000157354 106 ntBASIC-1.4□□□□□ -2.63
Trav3-1Q5R1I8 Gm24315-201ENSMUST00000177835 127 ntBASIC-1.4□□□□□ -2.63
Trav3-1Q5R1I8 Gm24761-201ENSMUST00000179589 127 ntBASIC-1.4□□□□□ -2.63
Trav3-1Q5R1I8 Mir7043-201ENSMUST00000184219 70 ntBASIC-1.4□□□□□ -2.63
Trav3-1Q5R1I8 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-1.4□□□□□ -2.63
Trav3-1Q5R1I8 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-1.4□□□□□ -2.63
Trav3-1Q5R1I8 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-1.41□□□□□ -2.63
Trav3-1Q5R1I8 Gm15654-201ENSMUST00000152660 300 ntBASIC-1.41□□□□□ -2.64
Trav3-1Q5R1I8 Gm23571-201ENSMUST00000180073 127 ntBASIC-1.41□□□□□ -2.64
Trav3-1Q5R1I8 Gm42623-201ENSMUST00000197225 379 ntBASIC-1.41□□□□□ -2.64
Trav3-1Q5R1I8 Gm44615-201ENSMUST00000206548 358 ntBASIC-1.41□□□□□ -2.64
Trav3-1Q5R1I8 Gm23625-201ENSMUST00000082457 100 ntBASIC-1.41□□□□□ -2.64
Trav3-1Q5R1I8 Gm26131-201ENSMUST00000082725 110 ntBASIC-1.41□□□□□ -2.64
Trav3-1Q5R1I8 Gm23142-201ENSMUST00000101848 105 ntBASIC-1.42□□□□□ -2.64
Trav3-1Q5R1I8 Gm26240-201ENSMUST00000101893 105 ntBASIC-1.42□□□□□ -2.64
Trav3-1Q5R1I8 Gm11407-201ENSMUST00000120362 1058 ntBASIC-1.42□□□□□ -2.64
Trav3-1Q5R1I8 Gm22097-201ENSMUST00000157929 278 ntBASIC-1.42□□□□□ -2.64
Trav3-1Q5R1I8 Gm25771-201ENSMUST00000158565 144 ntBASIC-1.42□□□□□ -2.64
Trav3-1Q5R1I8 Gm22011-201ENSMUST00000158790 123 ntBASIC-1.42□□□□□ -2.64
Trav3-1Q5R1I8 Gm24108-201ENSMUST00000175495 77 ntBASIC-1.42□□□□□ -2.64
Trav3-1Q5R1I8 Gm29140-201ENSMUST00000190187 476 ntBASIC-1.42□□□□□ -2.64
Trav3-1Q5R1I8 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-1.42□□□□□ -2.64
Trav3-1Q5R1I8 AC192333.2-201ENSMUST00000224771 196 ntBASIC-1.42□□□□□ -2.64
Trav3-1Q5R1I8 Gm22234-201ENSMUST00000174906 65 ntBASIC-1.43□□□□□ -2.64
Trav3-1Q5R1I8 Gm28917-201ENSMUST00000187294 237 ntBASIC-1.43□□□□□ -2.64
Trav3-1Q5R1I8 Gm26107-201ENSMUST00000083972 107 ntBASIC-1.43□□□□□ -2.64
Trav3-1Q5R1I8 Gm24714-201ENSMUST00000102382 101 ntBASIC-1.44□□□□□ -2.64
Trav3-1Q5R1I8 Gm24901-201ENSMUST00000158125 110 ntBASIC-1.44□□□□□ -2.64
Trav3-1Q5R1I8 Gm25974-201ENSMUST00000158701 94 ntBASIC-1.44□□□□□ -2.64
Trav3-1Q5R1I8 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.44□□□□□ -2.64
Trav3-1Q5R1I8 Gm42795-201ENSMUST00000198847 76 ntBASIC-1.44□□□□□ -2.64
Trav3-1Q5R1I8 Gm44726-201ENSMUST00000203427 217 ntBASIC-1.44□□□□□ -2.64
Trav3-1Q5R1I8 Gm24614-201ENSMUST00000083269 107 ntBASIC-1.44□□□□□ -2.64
Trav3-1Q5R1I8 Gm26108-201ENSMUST00000083973 191 ntBASIC-1.44□□□□□ -2.64
Trav3-1Q5R1I8 Gm23012-201ENSMUST00000104149 83 ntBASIC-1.45□□□□□ -2.64
Trav3-1Q5R1I8 Gm23466-201ENSMUST00000157133 106 ntBASIC-1.45□□□□□ -2.64
Trav3-1Q5R1I8 Gm23072-201ENSMUST00000158243 123 ntBASIC-1.45□□□□□ -2.64
Trav3-1Q5R1I8 Gm22166-201ENSMUST00000178419 121 ntBASIC-1.45□□□□□ -2.64
Trav3-1Q5R1I8 Gm23288-201ENSMUST00000179213 121 ntBASIC-1.45□□□□□ -2.64
Trav3-1Q5R1I8 Mir677-202ENSMUST00000197076 78 ntBASIC-1.45□□□□□ -2.64
Trav3-1Q5R1I8 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC-1.45□□□□□ -2.64
Trav3-1Q5R1I8 Gm24764-201ENSMUST00000083686 199 ntBASIC-1.45□□□□□ -2.64
Trav3-1Q5R1I8 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC-1.46□□□□□ -2.64
Trav3-1Q5R1I8 Gm24635-201ENSMUST00000122712 128 ntBASIC-1.46□□□□□ -2.64
Trav3-1Q5R1I8 Gm23016-201ENSMUST00000158431 62 ntBASIC-1.46□□□□□ -2.64
Trav3-1Q5R1I8 Gm25163-201ENSMUST00000158905 104 ntBASIC-1.46□□□□□ -2.64
Trav3-1Q5R1I8 Mir6961-201ENSMUST00000183874 67 ntBASIC-1.46□□□□□ -2.64
Trav3-1Q5R1I8 Gm38268-201ENSMUST00000195813 193 ntBASIC-1.46□□□□□ -2.64
Trav3-1Q5R1I8 Mir465d-201ENSMUST00000196314 58 ntBASIC-1.46□□□□□ -2.64
Trav3-1Q5R1I8 AC167192.2-201ENSMUST00000224794 198 ntBASIC-1.46□□□□□ -2.64
Trav3-1Q5R1I8 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC-1.46□□□□□ -2.64
Trav3-1Q5R1I8 Gm25496-201ENSMUST00000104430 120 ntBASIC-1.47□□□□□ -2.64
Trav3-1Q5R1I8 Gm14001-201ENSMUST00000118847 247 ntBASIC-1.47□□□□□ -2.64
Trav3-1Q5R1I8 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC-1.47□□□□□ -2.64
Trav3-1Q5R1I8 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.47□□□□□ -2.64
Trav3-1Q5R1I8 Mir216b-201ENSMUST00000102363 86 ntBASIC-1.48□□□□□ -2.65
Trav3-1Q5R1I8 Mir1191-201ENSMUST00000116883 120 ntBASIC-1.48□□□□□ -2.65
Trav3-1Q5R1I8 Gm13801-201ENSMUST00000120750 160 ntBASIC-1.48□□□□□ -2.65
Trav3-1Q5R1I8 Gm25909-201ENSMUST00000157619 121 ntBASIC-1.48□□□□□ -2.65
Trav3-1Q5R1I8 Zfp950-206ENSMUST00000178819 171 ntBASIC-1.48□□□□□ -2.65
Trav3-1Q5R1I8 Gm44392-201ENSMUST00000196758 115 ntBASIC-1.48□□□□□ -2.65
Trav3-1Q5R1I8 Gm24704-201ENSMUST00000093715 107 ntBASIC-1.48□□□□□ -2.65
Trav3-1Q5R1I8 Gm12584-201ENSMUST00000117109 1105 ntBASIC-1.49□□□□□ -2.65
Trav3-1Q5R1I8 Gm26255-201ENSMUST00000122492 103 ntBASIC-1.49□□□□□ -2.65
Trav3-1Q5R1I8 Gm24073-201ENSMUST00000158177 106 ntBASIC-1.49□□□□□ -2.65
Trav3-1Q5R1I8 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC-1.49□□□□□ -2.65
Trav3-1Q5R1I8 Gm45688-201ENSMUST00000210002 101 ntBASIC-1.49□□□□□ -2.65
Trav3-1Q5R1I8 Gm26202-201ENSMUST00000082910 65 ntBASIC-1.49□□□□□ -2.65
Trav3-1Q5R1I8 Gm24336-201ENSMUST00000104203 146 ntBASIC-1.5□□□□□ -2.65
Trav3-1Q5R1I8 Gm22489-201ENSMUST00000116813 62 ntBASIC-1.5□□□□□ -2.65
Trav3-1Q5R1I8 Gm23111-201ENSMUST00000122652 105 ntBASIC-1.5□□□□□ -2.65
Trav3-1Q5R1I8 Gm22553-201ENSMUST00000157797 295 ntBASIC-1.5□□□□□ -2.65
Trav3-1Q5R1I8 Gm22542-201ENSMUST00000158166 95 ntBASIC-1.5□□□□□ -2.65
Trav3-1Q5R1I8 Gm23145-201ENSMUST00000178912 79 ntBASIC-1.5□□□□□ -2.65
Trav3-1Q5R1I8 Gm25450-201ENSMUST00000179144 107 ntBASIC-1.5□□□□□ -2.65
Trav3-1Q5R1I8 Gm27410-201ENSMUST00000183851 115 ntBASIC-1.5□□□□□ -2.65
Trav3-1Q5R1I8 Mir7014-201ENSMUST00000183853 63 ntBASIC-1.5□□□□□ -2.65
Retrieved 100 of 76,532 protein–RNA pairs in 136.9 ms