Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 AC158982.2-201ENSMUST00000226283 184 ntBASIC-2.28□□□□□ -2.77
Ccdc88bQ4QRL3 Gm25275-201ENSMUST00000104297 129 ntBASIC-2.29□□□□□ -2.78
Ccdc88bQ4QRL3 Mir1839-201ENSMUST00000175366 127 ntBASIC-2.29□□□□□ -2.78
Ccdc88bQ4QRL3 Mir6382-201ENSMUST00000184055 110 ntBASIC-2.29□□□□□ -2.78
Ccdc88bQ4QRL3 Gm44057-201ENSMUST00000204547 96 ntBASIC-2.29□□□□□ -2.78
Ccdc88bQ4QRL3 Snord68-201ENSMUST00000082516 86 ntBASIC-2.29□□□□□ -2.78
Ccdc88bQ4QRL3 Mir369-201ENSMUST00000083627 79 ntBASIC-2.29□□□□□ -2.78
Ccdc88bQ4QRL3 Gm23000-201ENSMUST00000157083 139 ntBASIC-2.3□□□□□ -2.78
Ccdc88bQ4QRL3 Gm25656-201ENSMUST00000158466 66 ntBASIC-2.3□□□□□ -2.78
Ccdc88bQ4QRL3 Gm26177-201ENSMUST00000178683 107 ntBASIC-2.3□□□□□ -2.78
Ccdc88bQ4QRL3 Gm15077-201ENSMUST00000122344 362 ntBASIC-2.31□□□□□ -2.78
Ccdc88bQ4QRL3 Gm22720-201ENSMUST00000122710 87 ntBASIC-2.31□□□□□ -2.78
Ccdc88bQ4QRL3 Mir1951-201ENSMUST00000157981 89 ntBASIC-2.31□□□□□ -2.78
Ccdc88bQ4QRL3 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC-2.31□□□□□ -2.78
Ccdc88bQ4QRL3 AC153968.2-201ENSMUST00000215579 1140 ntBASIC-2.31□□□□□ -2.78
Ccdc88bQ4QRL3 Gm25475-201ENSMUST00000082825 180 ntBASIC-2.31□□□□□ -2.78
Ccdc88bQ4QRL3 Mir302d-201ENSMUST00000083513 66 ntBASIC-2.31□□□□□ -2.78
Ccdc88bQ4QRL3 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC-2.32□□□□□ -2.78
Ccdc88bQ4QRL3 Gm24171-201ENSMUST00000104126 131 ntBASIC-2.33□□□□□ -2.78
Ccdc88bQ4QRL3 Gm14913-201ENSMUST00000120011 1093 ntBASIC-2.33□□□□□ -2.78
Ccdc88bQ4QRL3 Snord123-201ENSMUST00000158692 71 ntBASIC-2.33□□□□□ -2.78
Ccdc88bQ4QRL3 Gm26239-201ENSMUST00000178842 107 ntBASIC-2.33□□□□□ -2.78
Ccdc88bQ4QRL3 Gm25327-201ENSMUST00000180263 107 ntBASIC-2.33□□□□□ -2.78
Ccdc88bQ4QRL3 Gm22749-201ENSMUST00000082490 107 ntBASIC-2.33□□□□□ -2.78
Ccdc88bQ4QRL3 Gm23242-201ENSMUST00000083055 107 ntBASIC-2.33□□□□□ -2.78
Ccdc88bQ4QRL3 Gm25577-201ENSMUST00000083414 107 ntBASIC-2.33□□□□□ -2.78
Ccdc88bQ4QRL3 Mir1b-201ENSMUST00000117012 122 ntBASIC-2.33□□□□□ -2.78
Ccdc88bQ4QRL3 Gm13368-201ENSMUST00000122443 430 ntBASIC-2.33□□□□□ -2.78
Ccdc88bQ4QRL3 Gm22290-201ENSMUST00000177655 107 ntBASIC-2.33□□□□□ -2.78
Ccdc88bQ4QRL3 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC-2.33□□□□□ -2.78
Ccdc88bQ4QRL3 Gm25588-201ENSMUST00000082501 140 ntBASIC-2.33□□□□□ -2.78
Ccdc88bQ4QRL3 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC-2.34□□□□□ -2.78
Ccdc88bQ4QRL3 AC132833.2-201ENSMUST00000228699 157 ntBASIC-2.34□□□□□ -2.78
Ccdc88bQ4QRL3 Mir20b-201ENSMUST00000102087 80 ntBASIC-2.35□□□□□ -2.79
Ccdc88bQ4QRL3 Gm24250-201ENSMUST00000157320 135 ntBASIC-2.35□□□□□ -2.79
Ccdc88bQ4QRL3 Gm26022-201ENSMUST00000158663 108 ntBASIC-2.35□□□□□ -2.79
Ccdc88bQ4QRL3 Gm23194-201ENSMUST00000158813 105 ntBASIC-2.35□□□□□ -2.79
Ccdc88bQ4QRL3 Mir6336-201ENSMUST00000183581 130 ntBASIC-2.35□□□□□ -2.79
Ccdc88bQ4QRL3 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC-2.36□□□□□ -2.79
Ccdc88bQ4QRL3 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC-2.36□□□□□ -2.79
Ccdc88bQ4QRL3 Gm43114-201ENSMUST00000198298 343 ntBASIC-2.36□□□□□ -2.79
Ccdc88bQ4QRL3 AC112972.1-201ENSMUST00000227329 365 ntBASIC-2.36□□□□□ -2.79
Ccdc88bQ4QRL3 Gm25204-201ENSMUST00000082843 106 ntBASIC-2.36□□□□□ -2.79
Ccdc88bQ4QRL3 Gm23013-201ENSMUST00000104146 106 ntBASIC-2.37□□□□□ -2.79
Ccdc88bQ4QRL3 Gm25235-201ENSMUST00000179933 107 ntBASIC-2.37□□□□□ -2.79
Ccdc88bQ4QRL3 Gm43884-201ENSMUST00000204251 559 ntBASIC-2.37□□□□□ -2.79
Ccdc88bQ4QRL3 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-2.37□□□□□ -2.79
Ccdc88bQ4QRL3 Gm26456-201ENSMUST00000082831 111 ntBASIC-2.37□□□□□ -2.79
Ccdc88bQ4QRL3 Gm25054-201ENSMUST00000157370 97 ntBASIC-2.38□□□□□ -2.79
Ccdc88bQ4QRL3 Gm24064-201ENSMUST00000157486 106 ntBASIC-2.38□□□□□ -2.79
Ccdc88bQ4QRL3 Snord2-201ENSMUST00000157899 69 ntBASIC-2.38□□□□□ -2.79
Ccdc88bQ4QRL3 Gm23182-201ENSMUST00000158688 135 ntBASIC-2.38□□□□□ -2.79
Ccdc88bQ4QRL3 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC-2.38□□□□□ -2.79
Ccdc88bQ4QRL3 Gm23637-201ENSMUST00000175075 94 ntBASIC-2.38□□□□□ -2.79
Ccdc88bQ4QRL3 Gm23648-201ENSMUST00000180301 107 ntBASIC-2.38□□□□□ -2.79
Ccdc88bQ4QRL3 AC168880.2-201ENSMUST00000224488 201 ntBASIC-2.38□□□□□ -2.79
Ccdc88bQ4QRL3 Gm25417-201ENSMUST00000104212 131 ntBASIC-2.39□□□□□ -2.79
Ccdc88bQ4QRL3 Gm26143-201ENSMUST00000104480 108 ntBASIC-2.39□□□□□ -2.79
Ccdc88bQ4QRL3 Gm14307-201ENSMUST00000118930 291 ntBASIC-2.39□□□□□ -2.79
Ccdc88bQ4QRL3 Gm13922-201ENSMUST00000119505 156 ntBASIC-2.39□□□□□ -2.79
Ccdc88bQ4QRL3 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-2.39□□□□□ -2.79
Ccdc88bQ4QRL3 Gm23661-201ENSMUST00000122630 87 ntBASIC-2.39□□□□□ -2.79
Ccdc88bQ4QRL3 Gm14297-201ENSMUST00000129110 291 ntBASIC-2.39□□□□□ -2.79
Ccdc88bQ4QRL3 Gm24042-201ENSMUST00000083114 103 ntBASIC-2.39□□□□□ -2.79
Ccdc88bQ4QRL3 Mir218-1-201ENSMUST00000083669 110 ntBASIC-2.39□□□□□ -2.79
Ccdc88bQ4QRL3 Gm26329-201ENSMUST00000093723 110 ntBASIC-2.39□□□□□ -2.79
Ccdc88bQ4QRL3 Gm26262-201ENSMUST00000158024 127 ntBASIC-2.39□□□□□ -2.79
Ccdc88bQ4QRL3 Gm22638-201ENSMUST00000179674 107 ntBASIC-2.39□□□□□ -2.79
Ccdc88bQ4QRL3 Gm44377-201ENSMUST00000199039 87 ntBASIC-2.39□□□□□ -2.79
Ccdc88bQ4QRL3 Gm24640-201ENSMUST00000116949 126 ntBASIC-2.4□□□□□ -2.79
Ccdc88bQ4QRL3 Gm22626-201ENSMUST00000116990 126 ntBASIC-2.4□□□□□ -2.79
Ccdc88bQ4QRL3 Gm24618-201ENSMUST00000177718 94 ntBASIC-2.4□□□□□ -2.79
Ccdc88bQ4QRL3 Gm23953-201ENSMUST00000178214 94 ntBASIC-2.4□□□□□ -2.79
Ccdc88bQ4QRL3 Gm26332-201ENSMUST00000179813 94 ntBASIC-2.4□□□□□ -2.79
Ccdc88bQ4QRL3 Gm22863-201ENSMUST00000180265 94 ntBASIC-2.4□□□□□ -2.79
Ccdc88bQ4QRL3 Gm24969-201ENSMUST00000180331 79 ntBASIC-2.4□□□□□ -2.79
Ccdc88bQ4QRL3 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC-2.4□□□□□ -2.79
Ccdc88bQ4QRL3 Gm27342-201ENSMUST00000183530 109 ntBASIC-2.4□□□□□ -2.79
Ccdc88bQ4QRL3 Gm44351-201ENSMUST00000200090 95 ntBASIC-2.4□□□□□ -2.79
Ccdc88bQ4QRL3 Gm24856-201ENSMUST00000082809 107 ntBASIC-2.4□□□□□ -2.79
Ccdc88bQ4QRL3 Gm28283-201ENSMUST00000185509 178 ntBASIC-2.41□□□□□ -2.8
Ccdc88bQ4QRL3 Mir421-201ENSMUST00000083575 76 ntBASIC-2.41□□□□□ -2.8
Ccdc88bQ4QRL3 Mir450-2-201ENSMUST00000102444 69 ntBASIC-2.42□□□□□ -2.8
Ccdc88bQ4QRL3 Gm23116-201ENSMUST00000158481 67 ntBASIC-2.42□□□□□ -2.8
Ccdc88bQ4QRL3 Gm23379-201ENSMUST00000180026 107 ntBASIC-2.42□□□□□ -2.8
Ccdc88bQ4QRL3 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC-2.42□□□□□ -2.8
Ccdc88bQ4QRL3 Gm5002-201ENSMUST00000207145 223 ntBASIC-2.42□□□□□ -2.8
Ccdc88bQ4QRL3 Gm26438-201ENSMUST00000082593 107 ntBASIC-2.42□□□□□ -2.8
Ccdc88bQ4QRL3 Gm22305-201ENSMUST00000082690 108 ntBASIC-2.42□□□□□ -2.8
Ccdc88bQ4QRL3 Gm11407-201ENSMUST00000120362 1058 ntBASIC-2.43□□□□□ -2.8
Ccdc88bQ4QRL3 Gm16053-201ENSMUST00000120511 188 ntBASIC-2.43□□□□□ -2.8
Ccdc88bQ4QRL3 Gm24596-201ENSMUST00000122504 107 ntBASIC-2.43□□□□□ -2.8
Ccdc88bQ4QRL3 Gm23022-201ENSMUST00000158768 180 ntBASIC-2.43□□□□□ -2.8
Ccdc88bQ4QRL3 Gm25245-201ENSMUST00000178139 107 ntBASIC-2.43□□□□□ -2.8
Ccdc88bQ4QRL3 Gm23610-201ENSMUST00000178659 107 ntBASIC-2.43□□□□□ -2.8
Ccdc88bQ4QRL3 Gm23712-201ENSMUST00000179713 107 ntBASIC-2.43□□□□□ -2.8
Ccdc88bQ4QRL3 Gm24870-201ENSMUST00000179897 107 ntBASIC-2.43□□□□□ -2.8
Ccdc88bQ4QRL3 Gm22645-201ENSMUST00000180010 107 ntBASIC-2.43□□□□□ -2.8
Ccdc88bQ4QRL3 Gm23057-201ENSMUST00000082801 107 ntBASIC-2.43□□□□□ -2.8
Ccdc88bQ4QRL3 Gm24448-201ENSMUST00000083979 107 ntBASIC-2.43□□□□□ -2.8
Retrieved 100 of 76,532 protein–RNA pairs in 151.6 ms