Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm24616-201ENSMUST00000083274 139 ntBASIC0.55□□□□□ -2.32
Upf3aQ3ULJ3 Snord33-201ENSMUST00000083694 84 ntBASIC0.55□□□□□ -2.32
Upf3aQ3ULJ3 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.54□□□□□ -2.32
Upf3aQ3ULJ3 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
Upf3aQ3ULJ3 Gm6272-201ENSMUST00000121256 171 ntBASIC0.54□□□□□ -2.32
Upf3aQ3ULJ3 Gm22433-201ENSMUST00000158550 142 ntBASIC0.54□□□□□ -2.32
Upf3aQ3ULJ3 Gm25718-201ENSMUST00000158632 118 ntBASIC0.54□□□□□ -2.32
Upf3aQ3ULJ3 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.54□□□□□ -2.32
Upf3aQ3ULJ3 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
Upf3aQ3ULJ3 Gm28435-201ENSMUST00000185496 108 ntBASIC0.54□□□□□ -2.32
Upf3aQ3ULJ3 Gm19790-201ENSMUST00000214414 251 ntBASIC0.54□□□□□ -2.32
Upf3aQ3ULJ3 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.54□□□□□ -2.32
Upf3aQ3ULJ3 Gm25378-201ENSMUST00000104333 129 ntBASIC0.53□□□□□ -2.32
Upf3aQ3ULJ3 Gm23672-201ENSMUST00000157471 107 ntBASIC0.53□□□□□ -2.32
Upf3aQ3ULJ3 Gm25494-201ENSMUST00000158143 100 ntBASIC0.53□□□□□ -2.32
Upf3aQ3ULJ3 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.53□□□□□ -2.32
Upf3aQ3ULJ3 Mir6377-201ENSMUST00000183760 114 ntBASIC0.53□□□□□ -2.32
Upf3aQ3ULJ3 Gm36956-201ENSMUST00000193830 214 ntBASIC0.53□□□□□ -2.32
Upf3aQ3ULJ3 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Upf3aQ3ULJ3 Gm26076-201ENSMUST00000104065 105 ntBASIC0.52□□□□□ -2.33
Upf3aQ3ULJ3 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
Upf3aQ3ULJ3 Snord100-201ENSMUST00000116836 74 ntBASIC0.52□□□□□ -2.33
Upf3aQ3ULJ3 Gm26279-201ENSMUST00000157095 102 ntBASIC0.52□□□□□ -2.33
Upf3aQ3ULJ3 Gm26274-201ENSMUST00000157103 321 ntBASIC0.52□□□□□ -2.33
Upf3aQ3ULJ3 Gm22340-201ENSMUST00000157717 114 ntBASIC0.52□□□□□ -2.33
Upf3aQ3ULJ3 Gm25223-201ENSMUST00000158200 110 ntBASIC0.52□□□□□ -2.33
Upf3aQ3ULJ3 Gm24678-201ENSMUST00000158756 104 ntBASIC0.52□□□□□ -2.33
Upf3aQ3ULJ3 Gm26160-201ENSMUST00000158965 63 ntBASIC0.52□□□□□ -2.33
Upf3aQ3ULJ3 Gm25241-201ENSMUST00000174909 84 ntBASIC0.52□□□□□ -2.33
Upf3aQ3ULJ3 Gm26217-201ENSMUST00000175212 84 ntBASIC0.52□□□□□ -2.33
Upf3aQ3ULJ3 Gm38364-201ENSMUST00000191814 179 ntBASIC0.52□□□□□ -2.33
Upf3aQ3ULJ3 Gm26326-201ENSMUST00000083070 129 ntBASIC0.52□□□□□ -2.33
Upf3aQ3ULJ3 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Upf3aQ3ULJ3 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
Upf3aQ3ULJ3 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC0.51□□□□□ -2.33
Upf3aQ3ULJ3 Gm24385-201ENSMUST00000122694 350 ntBASIC0.51□□□□□ -2.33
Upf3aQ3ULJ3 Gm22796-201ENSMUST00000157234 106 ntBASIC0.51□□□□□ -2.33
Upf3aQ3ULJ3 Gm22951-201ENSMUST00000179471 107 ntBASIC0.51□□□□□ -2.33
Upf3aQ3ULJ3 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.51□□□□□ -2.33
Upf3aQ3ULJ3 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.51□□□□□ -2.33
Upf3aQ3ULJ3 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.51□□□□□ -2.33
Upf3aQ3ULJ3 Gm23970-201ENSMUST00000083319 107 ntBASIC0.51□□□□□ -2.33
Upf3aQ3ULJ3 Gm22744-201ENSMUST00000083444 65 ntBASIC0.51□□□□□ -2.33
Upf3aQ3ULJ3 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.5□□□□□ -2.33
Upf3aQ3ULJ3 Gm24867-201ENSMUST00000104161 107 ntBASIC0.5□□□□□ -2.33
Upf3aQ3ULJ3 Mir1197-201ENSMUST00000117037 120 ntBASIC0.5□□□□□ -2.33
Upf3aQ3ULJ3 Gm14567-201ENSMUST00000117155 174 ntBASIC0.5□□□□□ -2.33
Upf3aQ3ULJ3 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
Upf3aQ3ULJ3 Gm13345-201ENSMUST00000121928 228 ntBASIC0.5□□□□□ -2.33
Upf3aQ3ULJ3 n-R5s87-201ENSMUST00000122752 116 ntBASIC0.5□□□□□ -2.33
Upf3aQ3ULJ3 Gm25654-201ENSMUST00000158467 88 ntBASIC0.5□□□□□ -2.33
Upf3aQ3ULJ3 Mir1933-201ENSMUST00000158930 88 ntBASIC0.5□□□□□ -2.33
Upf3aQ3ULJ3 Gm25247-201ENSMUST00000175475 90 ntBASIC0.5□□□□□ -2.33
Upf3aQ3ULJ3 Gm25749-201ENSMUST00000175485 111 ntBASIC0.5□□□□□ -2.33
Upf3aQ3ULJ3 Mir500-201ENSMUST00000093600 92 ntBASIC0.5□□□□□ -2.33
Upf3aQ3ULJ3 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
Upf3aQ3ULJ3 Mir466p-201ENSMUST00000103925 89 ntBASIC0.49□□□□□ -2.33
Upf3aQ3ULJ3 Gm22786-201ENSMUST00000104086 122 ntBASIC0.49□□□□□ -2.33
Upf3aQ3ULJ3 Gm23141-201ENSMUST00000178682 94 ntBASIC0.49□□□□□ -2.33
Upf3aQ3ULJ3 Gm44828-201ENSMUST00000203745 106 ntBASIC0.49□□□□□ -2.33
Upf3aQ3ULJ3 Gm22302-201ENSMUST00000082657 106 ntBASIC0.49□□□□□ -2.33
Upf3aQ3ULJ3 Mir186-201ENSMUST00000083497 71 ntBASIC0.49□□□□□ -2.33
Upf3aQ3ULJ3 Gm24445-201ENSMUST00000083981 107 ntBASIC0.49□□□□□ -2.33
Upf3aQ3ULJ3 Gm25110-201ENSMUST00000116684 121 ntBASIC0.48□□□□□ -2.33
Upf3aQ3ULJ3 Gm25775-201ENSMUST00000116716 121 ntBASIC0.48□□□□□ -2.33
Upf3aQ3ULJ3 Gm24795-201ENSMUST00000116737 121 ntBASIC0.48□□□□□ -2.33
Upf3aQ3ULJ3 Gm25171-201ENSMUST00000116926 121 ntBASIC0.48□□□□□ -2.33
Upf3aQ3ULJ3 Gm24288-201ENSMUST00000157630 144 ntBASIC0.48□□□□□ -2.33
Upf3aQ3ULJ3 Gm25882-201ENSMUST00000157784 85 ntBASIC0.48□□□□□ -2.33
Upf3aQ3ULJ3 Gm24729-201ENSMUST00000158225 137 ntBASIC0.48□□□□□ -2.33
Upf3aQ3ULJ3 Gm24772-201ENSMUST00000158507 110 ntBASIC0.48□□□□□ -2.33
Upf3aQ3ULJ3 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.48□□□□□ -2.33
Upf3aQ3ULJ3 Gm25138-201ENSMUST00000083248 136 ntBASIC0.48□□□□□ -2.33
Upf3aQ3ULJ3 Gm6952-201ENSMUST00000118629 159 ntBASIC0.47□□□□□ -2.33
Upf3aQ3ULJ3 Gm24509-201ENSMUST00000157086 101 ntBASIC0.47□□□□□ -2.33
Upf3aQ3ULJ3 Gm25358-201ENSMUST00000157189 101 ntBASIC0.47□□□□□ -2.33
Upf3aQ3ULJ3 Gm24547-201ENSMUST00000158649 149 ntBASIC0.47□□□□□ -2.33
Upf3aQ3ULJ3 Gm22887-201ENSMUST00000178586 107 ntBASIC0.47□□□□□ -2.33
Upf3aQ3ULJ3 Gm44488-201ENSMUST00000199467 119 ntBASIC0.47□□□□□ -2.33
Upf3aQ3ULJ3 Gm26123-201ENSMUST00000083363 135 ntBASIC0.47□□□□□ -2.33
Upf3aQ3ULJ3 Gm23545-201ENSMUST00000158205 104 ntBASIC0.46□□□□□ -2.34
Upf3aQ3ULJ3 Gm27289-201ENSMUST00000183341 82 ntBASIC0.46□□□□□ -2.34
Upf3aQ3ULJ3 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.46□□□□□ -2.34
Upf3aQ3ULJ3 Gm25611-201ENSMUST00000104017 133 ntBASIC0.45□□□□□ -2.34
Upf3aQ3ULJ3 Gm23708-201ENSMUST00000104367 123 ntBASIC0.45□□□□□ -2.34
Upf3aQ3ULJ3 Gm14884-201ENSMUST00000120456 196 ntBASIC0.45□□□□□ -2.34
Upf3aQ3ULJ3 Gm22999-201ENSMUST00000157082 88 ntBASIC0.45□□□□□ -2.34
Upf3aQ3ULJ3 Gm25390-201ENSMUST00000157341 103 ntBASIC0.45□□□□□ -2.34
Upf3aQ3ULJ3 Gm23853-201ENSMUST00000158375 104 ntBASIC0.45□□□□□ -2.34
Upf3aQ3ULJ3 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.45□□□□□ -2.34
Upf3aQ3ULJ3 Gm23567-201ENSMUST00000178005 107 ntBASIC0.45□□□□□ -2.34
Upf3aQ3ULJ3 Mir6389-201ENSMUST00000183661 102 ntBASIC0.45□□□□□ -2.34
Upf3aQ3ULJ3 Gm27332-201ENSMUST00000184893 112 ntBASIC0.45□□□□□ -2.34
Upf3aQ3ULJ3 Gm44409-201ENSMUST00000198810 166 ntBASIC0.45□□□□□ -2.34
Upf3aQ3ULJ3 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.45□□□□□ -2.34
Upf3aQ3ULJ3 Mir532-201ENSMUST00000093630 96 ntBASIC0.45□□□□□ -2.34
Upf3aQ3ULJ3 Mir669g-201ENSMUST00000116809 123 ntBASIC0.44□□□□□ -2.34
Upf3aQ3ULJ3 Gm26484-201ENSMUST00000158018 106 ntBASIC0.44□□□□□ -2.34
Upf3aQ3ULJ3 Gm22675-201ENSMUST00000158430 104 ntBASIC0.44□□□□□ -2.34
Upf3aQ3ULJ3 Gm23977-201ENSMUST00000177871 74 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms