Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Mir721-201ENSMUST00000200230 88 ntBASIC0.85□□□□□ -2.27
Trafd1Q3UDK1 Gm44976-201ENSMUST00000205543 261 ntBASIC0.85□□□□□ -2.27
Trafd1Q3UDK1 Gm44853-201ENSMUST00000209070 250 ntBASIC0.85□□□□□ -2.27
Trafd1Q3UDK1 Gm24457-201ENSMUST00000083196 105 ntBASIC0.85□□□□□ -2.27
Trafd1Q3UDK1 Gm14567-201ENSMUST00000117155 174 ntBASIC0.84□□□□□ -2.27
Trafd1Q3UDK1 Gm13345-201ENSMUST00000121928 228 ntBASIC0.84□□□□□ -2.27
Trafd1Q3UDK1 Gm22557-201ENSMUST00000157804 102 ntBASIC0.84□□□□□ -2.27
Trafd1Q3UDK1 Gm25044-201ENSMUST00000158603 104 ntBASIC0.84□□□□□ -2.27
Trafd1Q3UDK1 Gm16404-201ENSMUST00000177739 468 ntBASIC0.84□□□□□ -2.27
Trafd1Q3UDK1 Gm14598-201ENSMUST00000180109 468 ntBASIC0.84□□□□□ -2.27
Trafd1Q3UDK1 Gm14625-201ENSMUST00000180231 468 ntBASIC0.84□□□□□ -2.27
Trafd1Q3UDK1 Gm27420-201ENSMUST00000183823 79 ntBASIC0.84□□□□□ -2.27
Trafd1Q3UDK1 Mir7116-201ENSMUST00000195956 70 ntBASIC0.84□□□□□ -2.27
Trafd1Q3UDK1 AC192091.2-201ENSMUST00000217869 117 ntBASIC0.84□□□□□ -2.27
Trafd1Q3UDK1 Mir302d-201ENSMUST00000083513 66 ntBASIC0.84□□□□□ -2.27
Trafd1Q3UDK1 Gm23763-201ENSMUST00000158345 60 ntBASIC0.83□□□□□ -2.28
Trafd1Q3UDK1 Gm25901-201ENSMUST00000158494 130 ntBASIC0.83□□□□□ -2.28
Trafd1Q3UDK1 Gm22914-201ENSMUST00000175195 77 ntBASIC0.83□□□□□ -2.28
Trafd1Q3UDK1 Gm27587-201ENSMUST00000185116 163 ntBASIC0.83□□□□□ -2.28
Trafd1Q3UDK1 Mir1a-2-201ENSMUST00000198520 72 ntBASIC0.83□□□□□ -2.28
Trafd1Q3UDK1 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.83□□□□□ -2.28
Trafd1Q3UDK1 Gm22809-201ENSMUST00000082743 156 ntBASIC0.83□□□□□ -2.28
Trafd1Q3UDK1 Mir547-201ENSMUST00000102051 78 ntBASIC0.82□□□□□ -2.28
Trafd1Q3UDK1 Gm22689-201ENSMUST00000102452 110 ntBASIC0.82□□□□□ -2.28
Trafd1Q3UDK1 Gm23772-201ENSMUST00000104433 102 ntBASIC0.82□□□□□ -2.28
Trafd1Q3UDK1 Mir466h-201ENSMUST00000104748 81 ntBASIC0.82□□□□□ -2.28
Trafd1Q3UDK1 Gm25985-201ENSMUST00000122677 107 ntBASIC0.82□□□□□ -2.28
Trafd1Q3UDK1 Gm22850-201ENSMUST00000157714 82 ntBASIC0.82□□□□□ -2.28
Trafd1Q3UDK1 Gm27974-201ENSMUST00000183415 105 ntBASIC0.82□□□□□ -2.28
Trafd1Q3UDK1 Gm27465-201ENSMUST00000184290 91 ntBASIC0.82□□□□□ -2.28
Trafd1Q3UDK1 Gm18213-201ENSMUST00000207850 178 ntBASIC0.82□□□□□ -2.28
Trafd1Q3UDK1 Gm25588-201ENSMUST00000082501 140 ntBASIC0.82□□□□□ -2.28
Trafd1Q3UDK1 Mir200b-201ENSMUST00000083615 70 ntBASIC0.82□□□□□ -2.28
Trafd1Q3UDK1 Gm23130-201ENSMUST00000104252 74 ntBASIC0.81□□□□□ -2.28
Trafd1Q3UDK1 Gm25882-201ENSMUST00000157784 85 ntBASIC0.81□□□□□ -2.28
Trafd1Q3UDK1 Mir1961-201ENSMUST00000158643 112 ntBASIC0.81□□□□□ -2.28
Trafd1Q3UDK1 Gm22476-201ENSMUST00000158902 100 ntBASIC0.81□□□□□ -2.28
Trafd1Q3UDK1 Gm23567-201ENSMUST00000178005 107 ntBASIC0.81□□□□□ -2.28
Trafd1Q3UDK1 Mir21b-201ENSMUST00000184317 108 ntBASIC0.81□□□□□ -2.28
Trafd1Q3UDK1 Gm37624-201ENSMUST00000193751 219 ntBASIC0.81□□□□□ -2.28
Trafd1Q3UDK1 Gm44948-201ENSMUST00000209050 149 ntBASIC0.81□□□□□ -2.28
Trafd1Q3UDK1 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.81□□□□□ -2.28
Trafd1Q3UDK1 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Trafd1Q3UDK1 Gm22612-201ENSMUST00000158293 101 ntBASIC0.8□□□□□ -2.28
Trafd1Q3UDK1 Gm25011-201ENSMUST00000158398 126 ntBASIC0.8□□□□□ -2.28
Trafd1Q3UDK1 Gm22946-201ENSMUST00000158558 82 ntBASIC0.8□□□□□ -2.28
Trafd1Q3UDK1 Gm23209-201ENSMUST00000158667 110 ntBASIC0.8□□□□□ -2.28
Trafd1Q3UDK1 Gm26360-201ENSMUST00000158872 103 ntBASIC0.8□□□□□ -2.28
Trafd1Q3UDK1 Gm23864-201ENSMUST00000177607 107 ntBASIC0.8□□□□□ -2.28
Trafd1Q3UDK1 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.8□□□□□ -2.28
Trafd1Q3UDK1 Gm22738-201ENSMUST00000083440 147 ntBASIC0.8□□□□□ -2.28
Trafd1Q3UDK1 Mir471-201ENSMUST00000093596 67 ntBASIC0.8□□□□□ -2.28
Trafd1Q3UDK1 Gm24221-201ENSMUST00000158833 313 ntBASIC0.79□□□□□ -2.28
Trafd1Q3UDK1 Gm23008-201ENSMUST00000158946 80 ntBASIC0.79□□□□□ -2.28
Trafd1Q3UDK1 Gm23375-201ENSMUST00000175407 83 ntBASIC0.79□□□□□ -2.28
Trafd1Q3UDK1 Snord80-202ENSMUST00000199023 77 ntBASIC0.79□□□□□ -2.28
Trafd1Q3UDK1 Gm24311-201ENSMUST00000082570 104 ntBASIC0.79□□□□□ -2.28
Trafd1Q3UDK1 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.78□□□□□ -2.28
Trafd1Q3UDK1 Gm22148-201ENSMUST00000104445 107 ntBASIC0.78□□□□□ -2.28
Trafd1Q3UDK1 Mir467g-201ENSMUST00000116906 120 ntBASIC0.78□□□□□ -2.28
Trafd1Q3UDK1 Snord35a-201ENSMUST00000083884 90 ntBASIC0.78□□□□□ -2.28
Trafd1Q3UDK1 Gm13577-201ENSMUST00000121365 205 ntBASIC0.77□□□□□ -2.29
Trafd1Q3UDK1 Gm22515-201ENSMUST00000158273 305 ntBASIC0.77□□□□□ -2.29
Trafd1Q3UDK1 Mir6377-201ENSMUST00000183760 114 ntBASIC0.77□□□□□ -2.29
Trafd1Q3UDK1 Gm27803-201ENSMUST00000183763 119 ntBASIC0.77□□□□□ -2.29
Trafd1Q3UDK1 Gm42623-201ENSMUST00000197225 379 ntBASIC0.77□□□□□ -2.29
Trafd1Q3UDK1 Gm44301-201ENSMUST00000200362 143 ntBASIC0.77□□□□□ -2.29
Trafd1Q3UDK1 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.77□□□□□ -2.29
Trafd1Q3UDK1 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.77□□□□□ -2.29
Trafd1Q3UDK1 Gm23735-201ENSMUST00000082551 134 ntBASIC0.77□□□□□ -2.29
Trafd1Q3UDK1 Gm22169-201ENSMUST00000083229 107 ntBASIC0.77□□□□□ -2.29
Trafd1Q3UDK1 Gm22576-201ENSMUST00000083733 104 ntBASIC0.77□□□□□ -2.29
Trafd1Q3UDK1 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
Trafd1Q3UDK1 Gm25943-201ENSMUST00000103791 90 ntBASIC0.76□□□□□ -2.29
Trafd1Q3UDK1 Mir466b-7-201ENSMUST00000103804 88 ntBASIC0.76□□□□□ -2.29
Trafd1Q3UDK1 Mir466b-5-201ENSMUST00000103900 88 ntBASIC0.76□□□□□ -2.29
Trafd1Q3UDK1 Gm22482-201ENSMUST00000122563 359 ntBASIC0.76□□□□□ -2.29
Trafd1Q3UDK1 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
Trafd1Q3UDK1 Mir466b-4-201ENSMUST00000178801 90 ntBASIC0.76□□□□□ -2.29
Trafd1Q3UDK1 Gm25285-201ENSMUST00000178951 90 ntBASIC0.76□□□□□ -2.29
Trafd1Q3UDK1 Mir466b-6-201ENSMUST00000180061 90 ntBASIC0.76□□□□□ -2.29
Trafd1Q3UDK1 Mir466c-2-201ENSMUST00000180211 90 ntBASIC0.76□□□□□ -2.29
Trafd1Q3UDK1 Gm8219-201ENSMUST00000218309 242 ntBASIC0.76□□□□□ -2.29
Trafd1Q3UDK1 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.76□□□□□ -2.29
Trafd1Q3UDK1 Mir488-201ENSMUST00000093595 109 ntBASIC0.76□□□□□ -2.29
Trafd1Q3UDK1 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.75□□□□□ -2.29
Trafd1Q3UDK1 Gm25416-201ENSMUST00000104221 107 ntBASIC0.75□□□□□ -2.29
Trafd1Q3UDK1 Gm24250-201ENSMUST00000157320 135 ntBASIC0.75□□□□□ -2.29
Trafd1Q3UDK1 Gm24401-201ENSMUST00000157868 91 ntBASIC0.75□□□□□ -2.29
Trafd1Q3UDK1 Gm16307-201ENSMUST00000161269 210 ntBASIC0.75□□□□□ -2.29
Trafd1Q3UDK1 Gm23770-201ENSMUST00000178009 108 ntBASIC0.75□□□□□ -2.29
Trafd1Q3UDK1 Gm22832-201ENSMUST00000178022 108 ntBASIC0.75□□□□□ -2.29
Trafd1Q3UDK1 Gm23863-201ENSMUST00000178265 108 ntBASIC0.75□□□□□ -2.29
Trafd1Q3UDK1 Gm24828-201ENSMUST00000178507 108 ntBASIC0.75□□□□□ -2.29
Trafd1Q3UDK1 Gm23052-201ENSMUST00000178633 108 ntBASIC0.75□□□□□ -2.29
Trafd1Q3UDK1 Gm25729-201ENSMUST00000179050 108 ntBASIC0.75□□□□□ -2.29
Trafd1Q3UDK1 Gm25359-201ENSMUST00000179315 108 ntBASIC0.75□□□□□ -2.29
Trafd1Q3UDK1 Gm22624-201ENSMUST00000179913 108 ntBASIC0.75□□□□□ -2.29
Trafd1Q3UDK1 Gm38323-201ENSMUST00000192450 210 ntBASIC0.75□□□□□ -2.29
Trafd1Q3UDK1 Gm37116-201ENSMUST00000195161 147 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 131.2 ms