Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Ebf1Q07802 Gm25090-201ENSMUST00000104000 132 ntBASIC2.21□□□□□ -2.06
Ebf1Q07802 Mir880-201ENSMUST00000104809 78 ntBASIC2.21□□□□□ -2.06
Ebf1Q07802 Gm6444-201ENSMUST00000119611 458 ntBASIC2.21□□□□□ -2.06
Ebf1Q07802 Gm24947-201ENSMUST00000158334 110 ntBASIC2.21□□□□□ -2.06
Ebf1Q07802 Gm25996-201ENSMUST00000175393 117 ntBASIC2.21□□□□□ -2.06
Ebf1Q07802 Mir7225-201ENSMUST00000184178 54 ntBASIC2.21□□□□□ -2.06
Ebf1Q07802 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.21□□□□□ -2.06
Ebf1Q07802 CT571266.1-201ENSMUST00000222859 153 ntBASIC2.21□□□□□ -2.06
Ebf1Q07802 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.21□□□□□ -2.06
Ebf1Q07802 Gm10730-201ENSMUST00000194097 2723 ntBASIC2.21□□□□□ -2.06
Ebf1Q07802 Snord78-201ENSMUST00000104032 66 ntBASIC2.2□□□□□ -2.06
Ebf1Q07802 Gm22772-201ENSMUST00000104451 121 ntBASIC2.2□□□□□ -2.06
Ebf1Q07802 Gm24656-201ENSMUST00000177548 132 ntBASIC2.2□□□□□ -2.06
Ebf1Q07802 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Ebf1Q07802 Gm43206-201ENSMUST00000197990 114 ntBASIC2.2□□□□□ -2.06
Ebf1Q07802 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC2.2□□□□□ -2.06
Ebf1Q07802 Gm24099-201ENSMUST00000083384 107 ntBASIC2.2□□□□□ -2.06
Ebf1Q07802 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.2□□□□□ -2.06
Ebf1Q07802 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.19□□□□□ -2.06
Ebf1Q07802 Mir758-201ENSMUST00000103260 81 ntBASIC2.19□□□□□ -2.06
Ebf1Q07802 Gm23010-201ENSMUST00000104151 126 ntBASIC2.19□□□□□ -2.06
Ebf1Q07802 Gm25289-201ENSMUST00000122799 119 ntBASIC2.19□□□□□ -2.06
Ebf1Q07802 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Ebf1Q07802 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.19□□□□□ -2.06
Ebf1Q07802 Gm25855-201ENSMUST00000082787 72 ntBASIC2.19□□□□□ -2.06
Ebf1Q07802 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Ebf1Q07802 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Ebf1Q07802 Gm24098-201ENSMUST00000102075 109 ntBASIC2.18□□□□□ -2.06
Ebf1Q07802 Gm25381-201ENSMUST00000102078 109 ntBASIC2.18□□□□□ -2.06
Ebf1Q07802 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.18□□□□□ -2.06
Ebf1Q07802 Gm25887-201ENSMUST00000157777 84 ntBASIC2.18□□□□□ -2.06
Ebf1Q07802 Gm26004-201ENSMUST00000158804 116 ntBASIC2.18□□□□□ -2.06
Ebf1Q07802 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.18□□□□□ -2.06
Ebf1Q07802 Gm25636-201ENSMUST00000082666 133 ntBASIC2.18□□□□□ -2.06
Ebf1Q07802 Gm24661-201ENSMUST00000083205 104 ntBASIC2.18□□□□□ -2.06
Ebf1Q07802 Gm22545-201ENSMUST00000104350 132 ntBASIC2.17□□□□□ -2.06
Ebf1Q07802 Gm23652-201ENSMUST00000116752 107 ntBASIC2.17□□□□□ -2.06
Ebf1Q07802 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.17□□□□□ -2.06
Ebf1Q07802 Gm26466-201ENSMUST00000179615 79 ntBASIC2.17□□□□□ -2.06
Ebf1Q07802 Gm45654-201ENSMUST00000210980 123 ntBASIC2.17□□□□□ -2.06
Ebf1Q07802 Gm14674-201ENSMUST00000117816 342 ntBASIC2.16□□□□□ -2.06
Ebf1Q07802 Gm26090-201ENSMUST00000157897 128 ntBASIC2.16□□□□□ -2.06
Ebf1Q07802 Traj61-201ENSMUST00000165025 72 ntBASIC2.16□□□□□ -2.06
Ebf1Q07802 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.16□□□□□ -2.06
Ebf1Q07802 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.16□□□□□ -2.06
Ebf1Q07802 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
Ebf1Q07802 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.15□□□□□ -2.07
Ebf1Q07802 Gm22815-201ENSMUST00000157451 62 ntBASIC2.15□□□□□ -2.07
Ebf1Q07802 Gm24237-201ENSMUST00000157790 132 ntBASIC2.15□□□□□ -2.07
Ebf1Q07802 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.15□□□□□ -2.07
Ebf1Q07802 Snord50a-201ENSMUST00000178154 72 ntBASIC2.15□□□□□ -2.07
Ebf1Q07802 Gm24463-201ENSMUST00000178417 72 ntBASIC2.15□□□□□ -2.07
Ebf1Q07802 Gm25820-201ENSMUST00000198589 127 ntBASIC2.15□□□□□ -2.07
Ebf1Q07802 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.15□□□□□ -2.07
Ebf1Q07802 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Ebf1Q07802 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Ebf1Q07802 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Ebf1Q07802 Gm11856-201ENSMUST00000118712 276 ntBASIC2.14□□□□□ -2.07
Ebf1Q07802 Gm23656-201ENSMUST00000122626 112 ntBASIC2.14□□□□□ -2.07
Ebf1Q07802 Gm16510-201ENSMUST00000153501 249 ntBASIC2.14□□□□□ -2.07
Ebf1Q07802 Gm24649-201ENSMUST00000157106 134 ntBASIC2.14□□□□□ -2.07
Ebf1Q07802 Gm24769-201ENSMUST00000158506 129 ntBASIC2.14□□□□□ -2.07
Ebf1Q07802 Mir669n-201ENSMUST00000158636 54 ntBASIC2.14□□□□□ -2.07
Ebf1Q07802 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.14□□□□□ -2.07
Ebf1Q07802 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.14□□□□□ -2.07
Ebf1Q07802 Gm22723-201ENSMUST00000083820 129 ntBASIC2.14□□□□□ -2.07
Ebf1Q07802 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Ebf1Q07802 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Ebf1Q07802 Gm25610-201ENSMUST00000104016 129 ntBASIC2.13□□□□□ -2.07
Ebf1Q07802 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.13□□□□□ -2.07
Ebf1Q07802 Gm23996-201ENSMUST00000158062 131 ntBASIC2.13□□□□□ -2.07
Ebf1Q07802 Gm25836-201ENSMUST00000158918 123 ntBASIC2.13□□□□□ -2.07
Ebf1Q07802 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC2.13□□□□□ -2.07
Ebf1Q07802 Gm7214-201ENSMUST00000222428 272 ntBASIC2.13□□□□□ -2.07
Ebf1Q07802 Gm25788-201ENSMUST00000082721 131 ntBASIC2.13□□□□□ -2.07
Ebf1Q07802 Snora69-201ENSMUST00000083708 131 ntBASIC2.13□□□□□ -2.07
Ebf1Q07802 Mir451a-201ENSMUST00000093557 72 ntBASIC2.13□□□□□ -2.07
Ebf1Q07802 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Ebf1Q07802 Gm26253-201ENSMUST00000122493 103 ntBASIC2.12□□□□□ -2.07
Ebf1Q07802 Gm23601-201ENSMUST00000157259 131 ntBASIC2.12□□□□□ -2.07
Ebf1Q07802 Gm23384-201ENSMUST00000158593 103 ntBASIC2.12□□□□□ -2.07
Ebf1Q07802 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.12□□□□□ -2.07
Ebf1Q07802 Gm20477-201ENSMUST00000174028 280 ntBASIC2.12□□□□□ -2.07
Ebf1Q07802 Gm44408-201ENSMUST00000200205 66 ntBASIC2.12□□□□□ -2.07
Ebf1Q07802 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.12□□□□□ -2.07
Ebf1Q07802 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.12□□□□□ -2.07
Ebf1Q07802 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
Ebf1Q07802 Gm23109-201ENSMUST00000116867 126 ntBASIC2.11□□□□□ -2.07
Ebf1Q07802 Gm22033-201ENSMUST00000116947 90 ntBASIC2.11□□□□□ -2.07
Ebf1Q07802 Gm14588-201ENSMUST00000119895 172 ntBASIC2.11□□□□□ -2.07
Ebf1Q07802 Gm16328-201ENSMUST00000126985 196 ntBASIC2.11□□□□□ -2.07
Ebf1Q07802 Mir3086-201ENSMUST00000175072 87 ntBASIC2.11□□□□□ -2.07
Ebf1Q07802 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC2.11□□□□□ -2.07
Ebf1Q07802 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.11□□□□□ -2.07
Ebf1Q07802 Gm26922-201ENSMUST00000082687 72 ntBASIC2.11□□□□□ -2.07
Ebf1Q07802 Gm25681-201ENSMUST00000083938 106 ntBASIC2.11□□□□□ -2.07
Ebf1Q07802 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.11□□□□□ -2.07
Ebf1Q07802 Gm23986-201ENSMUST00000157144 63 ntBASIC2.1□□□□□ -2.07
Ebf1Q07802 Gm22319-201ENSMUST00000157147 122 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 217.3 ms