Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.11□□□□□ -1.91
Col9a1Q05722 Gm7214-201ENSMUST00000222428 272 ntBASIC3.11□□□□□ -1.91
Col9a1Q05722 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.11□□□□□ -1.91
Col9a1Q05722 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.11□□□□□ -1.91
Col9a1Q05722 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col9a1Q05722 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Col9a1Q05722 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Col9a1Q05722 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.1□□□□□ -1.91
Col9a1Q05722 Gm25068-201ENSMUST00000103895 110 ntBASIC3.1□□□□□ -1.91
Col9a1Q05722 Gm24396-201ENSMUST00000116905 93 ntBASIC3.1□□□□□ -1.91
Col9a1Q05722 Gm22803-201ENSMUST00000158049 283 ntBASIC3.1□□□□□ -1.91
Col9a1Q05722 Gm24210-201ENSMUST00000158263 133 ntBASIC3.1□□□□□ -1.91
Col9a1Q05722 Gm25528-201ENSMUST00000180264 132 ntBASIC3.1□□□□□ -1.91
Col9a1Q05722 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.1□□□□□ -1.91
Col9a1Q05722 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.1□□□□□ -1.91
Col9a1Q05722 Gm26494-201ENSMUST00000083154 143 ntBASIC3.1□□□□□ -1.91
Col9a1Q05722 Gm24493-201ENSMUST00000083805 143 ntBASIC3.1□□□□□ -1.91
Col9a1Q05722 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Col9a1Q05722 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
Col9a1Q05722 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
Col9a1Q05722 Gm22988-201ENSMUST00000122759 144 ntBASIC3.09□□□□□ -1.91
Col9a1Q05722 Gm23671-201ENSMUST00000157472 103 ntBASIC3.09□□□□□ -1.91
Col9a1Q05722 Gm26213-201ENSMUST00000158582 110 ntBASIC3.09□□□□□ -1.91
Col9a1Q05722 Gm25044-201ENSMUST00000158603 104 ntBASIC3.09□□□□□ -1.91
Col9a1Q05722 Mir6388-201ENSMUST00000184417 75 ntBASIC3.09□□□□□ -1.91
Col9a1Q05722 Gm27419-201ENSMUST00000184576 109 ntBASIC3.09□□□□□ -1.91
Col9a1Q05722 Mir3087-201ENSMUST00000199405 56 ntBASIC3.09□□□□□ -1.91
Col9a1Q05722 Gm43038-201ENSMUST00000202359 88 ntBASIC3.09□□□□□ -1.91
Col9a1Q05722 Gm19118-201ENSMUST00000222554 98 ntBASIC3.09□□□□□ -1.91
Col9a1Q05722 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col9a1Q05722 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Col9a1Q05722 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC3.08□□□□□ -1.92
Col9a1Q05722 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.08□□□□□ -1.92
Col9a1Q05722 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col9a1Q05722 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col9a1Q05722 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col9a1Q05722 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col9a1Q05722 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
Col9a1Q05722 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.07□□□□□ -1.92
Col9a1Q05722 Gm23950-201ENSMUST00000104026 129 ntBASIC3.07□□□□□ -1.92
Col9a1Q05722 Gm26015-201ENSMUST00000104402 125 ntBASIC3.07□□□□□ -1.92
Col9a1Q05722 Gm25160-201ENSMUST00000158914 102 ntBASIC3.07□□□□□ -1.92
Col9a1Q05722 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC3.07□□□□□ -1.92
Col9a1Q05722 AC129202.1-201ENSMUST00000224895 526 ntBASIC3.07□□□□□ -1.92
Col9a1Q05722 Gm25899-201ENSMUST00000082672 141 ntBASIC3.07□□□□□ -1.92
Col9a1Q05722 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.07□□□□□ -1.92
Col9a1Q05722 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.07□□□□□ -1.92
Col9a1Q05722 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Col9a1Q05722 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Col9a1Q05722 Gm22532-201ENSMUST00000158822 140 ntBASIC3.06□□□□□ -1.92
Col9a1Q05722 Gm20718-201ENSMUST00000176058 259 ntBASIC3.06□□□□□ -1.92
Col9a1Q05722 Mir30f-201ENSMUST00000196073 92 ntBASIC3.06□□□□□ -1.92
Col9a1Q05722 Gm43512-201ENSMUST00000198495 176 ntBASIC3.06□□□□□ -1.92
Col9a1Q05722 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col9a1Q05722 AC127578.1-201ENSMUST00000227289 93 ntBASIC3.06□□□□□ -1.92
Col9a1Q05722 AC122828.3-201ENSMUST00000223019 3915 ntBASIC3.06□□□□□ -1.92
Col9a1Q05722 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Col9a1Q05722 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Col9a1Q05722 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Col9a1Q05722 Gm6185-201ENSMUST00000193379 3553 ntBASIC3.05□□□□□ -1.92
Col9a1Q05722 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.05□□□□□ -1.92
Col9a1Q05722 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Col9a1Q05722 Gm25992-201ENSMUST00000102437 109 ntBASIC3.05□□□□□ -1.92
Col9a1Q05722 Gm26099-201ENSMUST00000157248 109 ntBASIC3.05□□□□□ -1.92
Col9a1Q05722 Gm25014-201ENSMUST00000158401 103 ntBASIC3.05□□□□□ -1.92
Col9a1Q05722 Gm20118-201ENSMUST00000187207 162 ntBASIC3.05□□□□□ -1.92
Col9a1Q05722 Gm44478-201ENSMUST00000204875 114 ntBASIC3.05□□□□□ -1.92
Col9a1Q05722 Gm6293-201ENSMUST00000050339 195 ntBASIC3.05□□□□□ -1.92
Col9a1Q05722 Gm25635-201ENSMUST00000082675 131 ntBASIC3.05□□□□□ -1.92
Col9a1Q05722 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Col9a1Q05722 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Col9a1Q05722 Gm25750-201ENSMUST00000175483 112 ntBASIC3.04□□□□□ -1.92
Col9a1Q05722 Mir7225-201ENSMUST00000184178 54 ntBASIC3.04□□□□□ -1.92
Col9a1Q05722 Mir6997-201ENSMUST00000184313 71 ntBASIC3.04□□□□□ -1.92
Col9a1Q05722 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.04□□□□□ -1.92
Col9a1Q05722 Gm37664-201ENSMUST00000194607 3813 ntBASIC3.04□□□□□ -1.92
Col9a1Q05722 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.04□□□□□ -1.92
Col9a1Q05722 AC122769.2-201ENSMUST00000227248 302 ntBASIC3.04□□□□□ -1.92
Col9a1Q05722 Gm25038-201ENSMUST00000082928 130 ntBASIC3.04□□□□□ -1.92
Col9a1Q05722 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Col9a1Q05722 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Col9a1Q05722 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
Col9a1Q05722 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.03□□□□□ -1.92
Col9a1Q05722 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Col9a1Q05722 Gm23128-201ENSMUST00000104257 132 ntBASIC3.03□□□□□ -1.92
Col9a1Q05722 Gm23911-201ENSMUST00000104596 134 ntBASIC3.03□□□□□ -1.92
Col9a1Q05722 Gm24288-201ENSMUST00000157630 144 ntBASIC3.03□□□□□ -1.92
Col9a1Q05722 Gm23548-201ENSMUST00000158963 106 ntBASIC3.03□□□□□ -1.92
Col9a1Q05722 Gm5900-201ENSMUST00000179862 375 ntBASIC3.03□□□□□ -1.92
Col9a1Q05722 Mir7013-201ENSMUST00000183540 72 ntBASIC3.03□□□□□ -1.92
Col9a1Q05722 Mir6715-201ENSMUST00000184990 57 ntBASIC3.03□□□□□ -1.92
Col9a1Q05722 Gm23128-202ENSMUST00000196578 133 ntBASIC3.03□□□□□ -1.92
Col9a1Q05722 Gm44343-201ENSMUST00000196702 90 ntBASIC3.03□□□□□ -1.92
Col9a1Q05722 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.03□□□□□ -1.92
Col9a1Q05722 Mir322-201ENSMUST00000083484 95 ntBASIC3.03□□□□□ -1.92
Col9a1Q05722 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Col9a1Q05722 Gm23010-201ENSMUST00000104151 126 ntBASIC3.01□□□□□ -1.93
Col9a1Q05722 Gm26423-201ENSMUST00000104277 128 ntBASIC3.01□□□□□ -1.93
Col9a1Q05722 Gm25496-201ENSMUST00000104430 120 ntBASIC3.01□□□□□ -1.93
Col9a1Q05722 Gm23656-201ENSMUST00000122626 112 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms