Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.04□□□□□ -2.08
Col8a1Q00780 Gm22999-201ENSMUST00000157082 88 ntBASIC2.04□□□□□ -2.08
Col8a1Q00780 Gm26411-201ENSMUST00000157668 107 ntBASIC2.04□□□□□ -2.08
Col8a1Q00780 Gm22338-201ENSMUST00000157715 129 ntBASIC2.04□□□□□ -2.08
Col8a1Q00780 Mir6376-201ENSMUST00000185149 131 ntBASIC2.04□□□□□ -2.08
Col8a1Q00780 Gm28647-201ENSMUST00000188416 197 ntBASIC2.04□□□□□ -2.08
Col8a1Q00780 Mir3087-201ENSMUST00000199405 56 ntBASIC2.04□□□□□ -2.08
Col8a1Q00780 Gm44408-201ENSMUST00000200205 66 ntBASIC2.04□□□□□ -2.08
Col8a1Q00780 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col8a1Q00780 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col8a1Q00780 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.04□□□□□ -2.08
Col8a1Q00780 Gm25199-201ENSMUST00000083095 104 ntBASIC2.04□□□□□ -2.08
Col8a1Q00780 Mir34c-201ENSMUST00000083653 77 ntBASIC2.04□□□□□ -2.08
Col8a1Q00780 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.03□□□□□ -2.08
Col8a1Q00780 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
Col8a1Q00780 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.03□□□□□ -2.08
Col8a1Q00780 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.03□□□□□ -2.08
Col8a1Q00780 Gm22067-201ENSMUST00000122790 107 ntBASIC2.03□□□□□ -2.08
Col8a1Q00780 Gm23838-201ENSMUST00000158067 162 ntBASIC2.03□□□□□ -2.08
Col8a1Q00780 Gm25370-201ENSMUST00000158159 94 ntBASIC2.03□□□□□ -2.08
Col8a1Q00780 Gm22517-201ENSMUST00000158265 136 ntBASIC2.03□□□□□ -2.08
Col8a1Q00780 Gm24771-201ENSMUST00000158508 137 ntBASIC2.03□□□□□ -2.08
Col8a1Q00780 Gm23181-201ENSMUST00000158685 110 ntBASIC2.03□□□□□ -2.08
Col8a1Q00780 Gm23005-201ENSMUST00000158950 136 ntBASIC2.03□□□□□ -2.08
Col8a1Q00780 Mir5619-201ENSMUST00000176065 61 ntBASIC2.03□□□□□ -2.08
Col8a1Q00780 Gm25449-201ENSMUST00000179389 79 ntBASIC2.03□□□□□ -2.08
Col8a1Q00780 Gm27878-201ENSMUST00000184000 106 ntBASIC2.03□□□□□ -2.08
Col8a1Q00780 Gm19855-201ENSMUST00000210145 249 ntBASIC2.03□□□□□ -2.08
Col8a1Q00780 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.03□□□□□ -2.08
Col8a1Q00780 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.03□□□□□ -2.08
Col8a1Q00780 Gm45265-201ENSMUST00000210852 2497 ntBASIC2.03□□□□□ -2.08
Col8a1Q00780 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Col8a1Q00780 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.02□□□□□ -2.09
Col8a1Q00780 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Col8a1Q00780 Gm24593-201ENSMUST00000122507 106 ntBASIC2.02□□□□□ -2.09
Col8a1Q00780 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC2.02□□□□□ -2.09
Col8a1Q00780 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.02□□□□□ -2.09
Col8a1Q00780 Gm23854-201ENSMUST00000158378 108 ntBASIC2.02□□□□□ -2.09
Col8a1Q00780 Gm23351-201ENSMUST00000158427 125 ntBASIC2.02□□□□□ -2.09
Col8a1Q00780 Mir3961-201ENSMUST00000198795 59 ntBASIC2.02□□□□□ -2.09
Col8a1Q00780 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC2.02□□□□□ -2.09
Col8a1Q00780 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Col8a1Q00780 AC153950.1-201ENSMUST00000219916 3238 ntBASIC2.01□□□□□ -2.09
Col8a1Q00780 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
Col8a1Q00780 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Col8a1Q00780 n-R5s39-201ENSMUST00000122613 108 ntBASIC2.01□□□□□ -2.09
Col8a1Q00780 Gm25836-201ENSMUST00000158918 123 ntBASIC2.01□□□□□ -2.09
Col8a1Q00780 Snora20-201ENSMUST00000082703 128 ntBASIC2.01□□□□□ -2.09
Col8a1Q00780 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
Col8a1Q00780 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Col8a1Q00780 Gm43540-201ENSMUST00000196320 3848 ntBASIC2□□□□□ -2.09
Col8a1Q00780 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
Col8a1Q00780 Gm22672-201ENSMUST00000104414 134 ntBASIC2□□□□□ -2.09
Col8a1Q00780 n-R5s15-201ENSMUST00000122635 111 ntBASIC2□□□□□ -2.09
Col8a1Q00780 Gm24436-201ENSMUST00000157889 302 ntBASIC2□□□□□ -2.09
Col8a1Q00780 Gm22535-201ENSMUST00000158174 119 ntBASIC2□□□□□ -2.09
Col8a1Q00780 Gm24801-201ENSMUST00000178503 105 ntBASIC2□□□□□ -2.09
Col8a1Q00780 Gm25357-201ENSMUST00000082745 72 ntBASIC2□□□□□ -2.09
Col8a1Q00780 Gm24527-201ENSMUST00000082920 107 ntBASIC2□□□□□ -2.09
Col8a1Q00780 Mir490-201ENSMUST00000093567 84 ntBASIC2□□□□□ -2.09
Col8a1Q00780 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
Col8a1Q00780 Gm44133-202ENSMUST00000204450 2586 ntBASIC2□□□□□ -2.09
Col8a1Q00780 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Col8a1Q00780 Gm25094-201ENSMUST00000103992 131 ntBASIC1.99□□□□□ -2.09
Col8a1Q00780 Gm22768-201ENSMUST00000158366 153 ntBASIC1.99□□□□□ -2.09
Col8a1Q00780 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.99□□□□□ -2.09
Col8a1Q00780 Gm6788-201ENSMUST00000166459 270 ntBASIC1.99□□□□□ -2.09
Col8a1Q00780 Mir21c-201ENSMUST00000184910 78 ntBASIC1.99□□□□□ -2.09
Col8a1Q00780 Gm37579-201ENSMUST00000194291 142 ntBASIC1.99□□□□□ -2.09
Col8a1Q00780 Mir7215-201ENSMUST00000200383 51 ntBASIC1.99□□□□□ -2.09
Col8a1Q00780 Gm45654-201ENSMUST00000210980 123 ntBASIC1.99□□□□□ -2.09
Col8a1Q00780 Gm25855-201ENSMUST00000082787 72 ntBASIC1.99□□□□□ -2.09
Col8a1Q00780 Gm22743-201ENSMUST00000083445 133 ntBASIC1.99□□□□□ -2.09
Col8a1Q00780 Mir423-201ENSMUST00000083584 109 ntBASIC1.99□□□□□ -2.09
Col8a1Q00780 Snord80-201ENSMUST00000083801 81 ntBASIC1.99□□□□□ -2.09
Col8a1Q00780 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Col8a1Q00780 Gm22888-201ENSMUST00000158640 77 ntBASIC1.98□□□□□ -2.09
Col8a1Q00780 Gm25337-201ENSMUST00000083723 104 ntBASIC1.98□□□□□ -2.09
Col8a1Q00780 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Col8a1Q00780 Gm44680-201ENSMUST00000208414 2910 ntBASIC1.98□□□□□ -2.09
Col8a1Q00780 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Col8a1Q00780 Gm22149-201ENSMUST00000104442 136 ntBASIC1.97□□□□□ -2.09
Col8a1Q00780 Gm22159-201ENSMUST00000158412 130 ntBASIC1.97□□□□□ -2.09
Col8a1Q00780 Gm27415-201ENSMUST00000183720 95 ntBASIC1.97□□□□□ -2.09
Col8a1Q00780 Gm42795-201ENSMUST00000198847 76 ntBASIC1.97□□□□□ -2.09
Col8a1Q00780 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Col8a1Q00780 Mir802-201ENSMUST00000103258 97 ntBASIC1.96□□□□□ -2.1
Col8a1Q00780 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Col8a1Q00780 Mir1187-201ENSMUST00000116936 122 ntBASIC1.96□□□□□ -2.1
Col8a1Q00780 Gm11248-201ENSMUST00000119568 201 ntBASIC1.96□□□□□ -2.1
Col8a1Q00780 Gm24379-201ENSMUST00000122695 86 ntBASIC1.96□□□□□ -2.1
Col8a1Q00780 Gm26090-201ENSMUST00000157897 128 ntBASIC1.96□□□□□ -2.1
Col8a1Q00780 Mir1950-201ENSMUST00000158526 74 ntBASIC1.96□□□□□ -2.1
Col8a1Q00780 Gm24668-201ENSMUST00000158935 104 ntBASIC1.96□□□□□ -2.1
Col8a1Q00780 Gm22503-201ENSMUST00000158983 115 ntBASIC1.96□□□□□ -2.1
Col8a1Q00780 Gm24656-201ENSMUST00000177548 132 ntBASIC1.96□□□□□ -2.1
Col8a1Q00780 Gm3852-201ENSMUST00000182781 264 ntBASIC1.96□□□□□ -2.1
Col8a1Q00780 Trbv25-201ENSMUST00000194700 273 ntBASIC1.96□□□□□ -2.1
Col8a1Q00780 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.96□□□□□ -2.1
Col8a1Q00780 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 111.6 ms