Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm23375-201ENSMUST00000175407 83 ntBASIC1.16□□□□□ -2.22
Pdlim4P70271 Gm22862-201ENSMUST00000178593 121 ntBASIC1.16□□□□□ -2.22
Pdlim4P70271 Gm27792-201ENSMUST00000184031 115 ntBASIC1.16□□□□□ -2.22
Pdlim4P70271 Gm28256-201ENSMUST00000188953 139 ntBASIC1.16□□□□□ -2.22
Pdlim4P70271 Gm28559-201ENSMUST00000190532 139 ntBASIC1.16□□□□□ -2.22
Pdlim4P70271 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC1.16□□□□□ -2.22
Pdlim4P70271 Gm16976-205ENSMUST00000227324 226 ntBASIC1.16□□□□□ -2.22
Pdlim4P70271 Snord96a-201ENSMUST00000082791 81 ntBASIC1.16□□□□□ -2.22
Pdlim4P70271 Mir466b-3-201ENSMUST00000103806 81 ntBASIC1.15□□□□□ -2.23
Pdlim4P70271 Gm22796-201ENSMUST00000157234 106 ntBASIC1.15□□□□□ -2.23
Pdlim4P70271 Gm25241-201ENSMUST00000174909 84 ntBASIC1.15□□□□□ -2.23
Pdlim4P70271 Gm26217-201ENSMUST00000175212 84 ntBASIC1.15□□□□□ -2.23
Pdlim4P70271 Gm27898-201ENSMUST00000183987 80 ntBASIC1.15□□□□□ -2.23
Pdlim4P70271 Gm27493-201ENSMUST00000184128 78 ntBASIC1.15□□□□□ -2.23
Pdlim4P70271 Mir6928-201ENSMUST00000185166 70 ntBASIC1.15□□□□□ -2.23
Pdlim4P70271 Gm24461-201ENSMUST00000082735 103 ntBASIC1.15□□□□□ -2.23
Pdlim4P70271 Gm23445-201ENSMUST00000082800 107 ntBASIC1.15□□□□□ -2.23
Pdlim4P70271 Gm26123-201ENSMUST00000083363 135 ntBASIC1.15□□□□□ -2.23
Pdlim4P70271 Gm26080-201ENSMUST00000104069 131 ntBASIC1.14□□□□□ -2.23
Pdlim4P70271 Gm44489-201ENSMUST00000104619 97 ntBASIC1.14□□□□□ -2.23
Pdlim4P70271 Gm14568-201ENSMUST00000119321 294 ntBASIC1.14□□□□□ -2.23
Pdlim4P70271 Gm24141-201ENSMUST00000122776 115 ntBASIC1.14□□□□□ -2.23
Pdlim4P70271 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.14□□□□□ -2.23
Pdlim4P70271 Gm22559-201ENSMUST00000157329 134 ntBASIC1.14□□□□□ -2.23
Pdlim4P70271 Gm22815-201ENSMUST00000157451 62 ntBASIC1.14□□□□□ -2.23
Pdlim4P70271 Gm25428-201ENSMUST00000157608 114 ntBASIC1.14□□□□□ -2.23
Pdlim4P70271 Gm26337-201ENSMUST00000178000 79 ntBASIC1.14□□□□□ -2.23
Pdlim4P70271 Mir8090-201ENSMUST00000185078 136 ntBASIC1.14□□□□□ -2.23
Pdlim4P70271 Gm44462-201ENSMUST00000199696 129 ntBASIC1.14□□□□□ -2.23
Pdlim4P70271 Gm25797-201ENSMUST00000082640 107 ntBASIC1.14□□□□□ -2.23
Pdlim4P70271 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Pdlim4P70271 Mir547-201ENSMUST00000102051 78 ntBASIC1.13□□□□□ -2.23
Pdlim4P70271 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.13□□□□□ -2.23
Pdlim4P70271 Gm22332-201ENSMUST00000158072 126 ntBASIC1.13□□□□□ -2.23
Pdlim4P70271 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Pdlim4P70271 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.13□□□□□ -2.23
Pdlim4P70271 Gm8508-201ENSMUST00000061226 363 ntBASIC1.13□□□□□ -2.23
Pdlim4P70271 Gm24588-201ENSMUST00000116696 83 ntBASIC1.12□□□□□ -2.23
Pdlim4P70271 Gm24915-201ENSMUST00000157288 78 ntBASIC1.12□□□□□ -2.23
Pdlim4P70271 Gm22349-201ENSMUST00000157864 107 ntBASIC1.12□□□□□ -2.23
Pdlim4P70271 Gm22966-201ENSMUST00000157957 129 ntBASIC1.12□□□□□ -2.23
Pdlim4P70271 Gm23922-201ENSMUST00000178792 79 ntBASIC1.12□□□□□ -2.23
Pdlim4P70271 Gm24657-201ENSMUST00000180085 79 ntBASIC1.12□□□□□ -2.23
Pdlim4P70271 Gm22996-201ENSMUST00000180236 79 ntBASIC1.12□□□□□ -2.23
Pdlim4P70271 Gm27446-201ENSMUST00000183963 89 ntBASIC1.12□□□□□ -2.23
Pdlim4P70271 Gm27365-201ENSMUST00000184041 177 ntBASIC1.12□□□□□ -2.23
Pdlim4P70271 Gm45268-201ENSMUST00000210046 370 ntBASIC1.12□□□□□ -2.23
Pdlim4P70271 Mir411-201ENSMUST00000083543 82 ntBASIC1.12□□□□□ -2.23
Pdlim4P70271 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Pdlim4P70271 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.11□□□□□ -2.23
Pdlim4P70271 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.11□□□□□ -2.23
Pdlim4P70271 Gm25915-201ENSMUST00000104265 126 ntBASIC1.11□□□□□ -2.23
Pdlim4P70271 Gm14946-201ENSMUST00000119859 296 ntBASIC1.11□□□□□ -2.23
Pdlim4P70271 Gm22425-201ENSMUST00000158532 138 ntBASIC1.11□□□□□ -2.23
Pdlim4P70271 Gm23504-201ENSMUST00000158988 95 ntBASIC1.11□□□□□ -2.23
Pdlim4P70271 Traj60-201ENSMUST00000167781 54 ntBASIC1.11□□□□□ -2.23
Pdlim4P70271 Gm43898-201ENSMUST00000204456 424 ntBASIC1.11□□□□□ -2.23
Pdlim4P70271 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Pdlim4P70271 Gm25377-201ENSMUST00000104334 129 ntBASIC1.1□□□□□ -2.23
Pdlim4P70271 Gm14626-201ENSMUST00000117619 216 ntBASIC1.1□□□□□ -2.23
Pdlim4P70271 Gm23260-201ENSMUST00000158317 172 ntBASIC1.1□□□□□ -2.23
Pdlim4P70271 Gm22775-201ENSMUST00000177630 120 ntBASIC1.1□□□□□ -2.23
Pdlim4P70271 Gm23569-201ENSMUST00000180120 120 ntBASIC1.1□□□□□ -2.23
Pdlim4P70271 Gm27711-201ENSMUST00000183802 118 ntBASIC1.1□□□□□ -2.23
Pdlim4P70271 AC164561.1-201ENSMUST00000220414 115 ntBASIC1.1□□□□□ -2.23
Pdlim4P70271 AC158982.2-201ENSMUST00000226283 184 ntBASIC1.1□□□□□ -2.23
Pdlim4P70271 Gm23509-201ENSMUST00000083080 160 ntBASIC1.1□□□□□ -2.23
Pdlim4P70271 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.1□□□□□ -2.23
Pdlim4P70271 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Pdlim4P70271 Gm25759-201ENSMUST00000103988 129 ntBASIC1.09□□□□□ -2.23
Pdlim4P70271 Gm25611-201ENSMUST00000104017 133 ntBASIC1.09□□□□□ -2.23
Pdlim4P70271 Gm23651-201ENSMUST00000116755 120 ntBASIC1.09□□□□□ -2.23
Pdlim4P70271 Gm25060-201ENSMUST00000157374 130 ntBASIC1.09□□□□□ -2.23
Pdlim4P70271 Gm24238-201ENSMUST00000157792 98 ntBASIC1.09□□□□□ -2.23
Pdlim4P70271 Gm26084-201ENSMUST00000157903 104 ntBASIC1.09□□□□□ -2.23
Pdlim4P70271 Gm16307-201ENSMUST00000161269 210 ntBASIC1.09□□□□□ -2.23
Pdlim4P70271 Gm45492-201ENSMUST00000211611 288 ntBASIC1.09□□□□□ -2.23
Pdlim4P70271 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.09□□□□□ -2.23
Pdlim4P70271 Gm25814-201ENSMUST00000082754 107 ntBASIC1.09□□□□□ -2.23
Pdlim4P70271 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Pdlim4P70271 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Pdlim4P70271 Gm23336-201ENSMUST00000117023 123 ntBASIC1.08□□□□□ -2.24
Pdlim4P70271 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC1.08□□□□□ -2.24
Pdlim4P70271 Gm22384-201ENSMUST00000158187 104 ntBASIC1.08□□□□□ -2.24
Pdlim4P70271 Mir3087-201ENSMUST00000199405 56 ntBASIC1.08□□□□□ -2.24
Pdlim4P70271 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.08□□□□□ -2.24
Pdlim4P70271 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.08□□□□□ -2.24
Pdlim4P70271 Gm10351-201ENSMUST00000087694 125 ntBASIC1.08□□□□□ -2.24
Pdlim4P70271 Gm10813-201ENSMUST00000099936 90 ntBASIC1.08□□□□□ -2.24
Pdlim4P70271 Gm11857-201ENSMUST00000119817 324 ntBASIC1.07□□□□□ -2.24
Pdlim4P70271 Gm26091-201ENSMUST00000122704 82 ntBASIC1.07□□□□□ -2.24
Pdlim4P70271 Mir3094-201ENSMUST00000175121 64 ntBASIC1.07□□□□□ -2.24
Pdlim4P70271 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.07□□□□□ -2.24
Pdlim4P70271 Gm16399-201ENSMUST00000181423 219 ntBASIC1.07□□□□□ -2.24
Pdlim4P70271 Gm26224-201ENSMUST00000082506 80 ntBASIC1.07□□□□□ -2.24
Pdlim4P70271 Gm22297-201ENSMUST00000083312 106 ntBASIC1.07□□□□□ -2.24
Pdlim4P70271 Gm22681-201ENSMUST00000083853 106 ntBASIC1.07□□□□□ -2.24
Pdlim4P70271 Gm23907-201ENSMUST00000104595 189 ntBASIC1.06□□□□□ -2.24
Pdlim4P70271 Gm24246-201ENSMUST00000157315 132 ntBASIC1.06□□□□□ -2.24
Pdlim4P70271 Gm23253-201ENSMUST00000157441 104 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 137 ms