Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Gm18665-201ENSMUST00000189783 270 ntBASIC1.26□□□□□ -2.21
SmoP56726 Gm23245-201ENSMUST00000083370 135 ntBASIC1.26□□□□□ -2.21
SmoP56726 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
SmoP56726 Mir343-201ENSMUST00000102360 75 ntBASIC1.25□□□□□ -2.21
SmoP56726 Gm22105-201ENSMUST00000116734 116 ntBASIC1.25□□□□□ -2.21
SmoP56726 Gm14502-201ENSMUST00000118154 113 ntBASIC1.25□□□□□ -2.21
SmoP56726 Gm27420-201ENSMUST00000183823 79 ntBASIC1.25□□□□□ -2.21
SmoP56726 Gm26379-202ENSMUST00000200225 132 ntBASIC1.25□□□□□ -2.21
SmoP56726 Gm45268-201ENSMUST00000210046 370 ntBASIC1.25□□□□□ -2.21
SmoP56726 Gm26123-201ENSMUST00000083363 135 ntBASIC1.25□□□□□ -2.21
SmoP56726 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
SmoP56726 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
SmoP56726 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
SmoP56726 Gm24250-201ENSMUST00000157320 135 ntBASIC1.24□□□□□ -2.21
SmoP56726 Gm22815-201ENSMUST00000157451 62 ntBASIC1.24□□□□□ -2.21
SmoP56726 Gm23770-201ENSMUST00000178009 108 ntBASIC1.24□□□□□ -2.21
SmoP56726 Gm22832-201ENSMUST00000178022 108 ntBASIC1.24□□□□□ -2.21
SmoP56726 Gm23863-201ENSMUST00000178265 108 ntBASIC1.24□□□□□ -2.21
SmoP56726 Gm24828-201ENSMUST00000178507 108 ntBASIC1.24□□□□□ -2.21
SmoP56726 Gm23052-201ENSMUST00000178633 108 ntBASIC1.24□□□□□ -2.21
SmoP56726 Gm25729-201ENSMUST00000179050 108 ntBASIC1.24□□□□□ -2.21
SmoP56726 Gm25359-201ENSMUST00000179315 108 ntBASIC1.24□□□□□ -2.21
SmoP56726 Gm22624-201ENSMUST00000179913 108 ntBASIC1.24□□□□□ -2.21
SmoP56726 Gm20734-201ENSMUST00000216939 193 ntBASIC1.24□□□□□ -2.21
SmoP56726 Gm8508-201ENSMUST00000061226 363 ntBASIC1.24□□□□□ -2.21
SmoP56726 Gm25136-201ENSMUST00000083253 115 ntBASIC1.24□□□□□ -2.21
SmoP56726 Gm26018-201ENSMUST00000104406 128 ntBASIC1.23□□□□□ -2.21
SmoP56726 Snord90-201ENSMUST00000104568 111 ntBASIC1.23□□□□□ -2.21
SmoP56726 Gm23083-201ENSMUST00000157851 116 ntBASIC1.23□□□□□ -2.21
SmoP56726 Gm26029-201ENSMUST00000158659 132 ntBASIC1.23□□□□□ -2.21
SmoP56726 Gm23339-201ENSMUST00000158962 139 ntBASIC1.23□□□□□ -2.21
SmoP56726 Gm25820-201ENSMUST00000198589 127 ntBASIC1.23□□□□□ -2.21
SmoP56726 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.23□□□□□ -2.21
SmoP56726 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC1.23□□□□□ -2.21
SmoP56726 Gm18502-201ENSMUST00000218679 199 ntBASIC1.23□□□□□ -2.21
SmoP56726 Gm22079-201ENSMUST00000157592 106 ntBASIC1.22□□□□□ -2.21
SmoP56726 Gm24808-201ENSMUST00000157993 118 ntBASIC1.22□□□□□ -2.21
SmoP56726 Gm23859-201ENSMUST00000158383 64 ntBASIC1.22□□□□□ -2.21
SmoP56726 Mir6962-201ENSMUST00000199512 63 ntBASIC1.22□□□□□ -2.21
SmoP56726 Gm43911-201ENSMUST00000203097 76 ntBASIC1.22□□□□□ -2.21
SmoP56726 AC168880.2-201ENSMUST00000224488 201 ntBASIC1.22□□□□□ -2.21
SmoP56726 Gm26224-201ENSMUST00000082506 80 ntBASIC1.22□□□□□ -2.21
SmoP56726 Gm25081-201ENSMUST00000082534 108 ntBASIC1.22□□□□□ -2.21
SmoP56726 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SmoP56726 Gm25611-201ENSMUST00000104017 133 ntBASIC1.21□□□□□ -2.22
SmoP56726 Gm22780-201ENSMUST00000104084 132 ntBASIC1.21□□□□□ -2.22
SmoP56726 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
SmoP56726 Gm22663-201ENSMUST00000158721 102 ntBASIC1.21□□□□□ -2.22
SmoP56726 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.21□□□□□ -2.22
SmoP56726 Gm24252-201ENSMUST00000083700 132 ntBASIC1.21□□□□□ -2.22
SmoP56726 Gm23947-201ENSMUST00000093636 107 ntBASIC1.21□□□□□ -2.22
SmoP56726 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
SmoP56726 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
SmoP56726 Gm24865-201ENSMUST00000103246 96 ntBASIC1.2□□□□□ -2.22
SmoP56726 Gm24263-201ENSMUST00000104059 107 ntBASIC1.2□□□□□ -2.22
SmoP56726 Gm23114-201ENSMUST00000158478 117 ntBASIC1.2□□□□□ -2.22
SmoP56726 Gm22425-201ENSMUST00000158532 138 ntBASIC1.2□□□□□ -2.22
SmoP56726 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC1.2□□□□□ -2.22
SmoP56726 Gm25128-201ENSMUST00000083339 76 ntBASIC1.2□□□□□ -2.22
SmoP56726 Mir19b-2-201ENSMUST00000083539 84 ntBASIC1.2□□□□□ -2.22
SmoP56726 Mir411-201ENSMUST00000083543 82 ntBASIC1.2□□□□□ -2.22
SmoP56726 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
SmoP56726 Gm26412-201ENSMUST00000157666 55 ntBASIC1.19□□□□□ -2.22
SmoP56726 Gm24238-201ENSMUST00000157792 98 ntBASIC1.19□□□□□ -2.22
SmoP56726 Gm24001-201ENSMUST00000158463 85 ntBASIC1.19□□□□□ -2.22
SmoP56726 Gm17528-201ENSMUST00000171026 239 ntBASIC1.19□□□□□ -2.22
SmoP56726 Gm23636-201ENSMUST00000175070 95 ntBASIC1.19□□□□□ -2.22
SmoP56726 Mir6928-201ENSMUST00000185166 70 ntBASIC1.19□□□□□ -2.22
SmoP56726 Mir547-201ENSMUST00000102051 78 ntBASIC1.18□□□□□ -2.22
SmoP56726 Mir7091-201ENSMUST00000184075 79 ntBASIC1.18□□□□□ -2.22
SmoP56726 Mir6905-201ENSMUST00000184228 70 ntBASIC1.18□□□□□ -2.22
SmoP56726 Gm44462-201ENSMUST00000199696 129 ntBASIC1.18□□□□□ -2.22
SmoP56726 AC151902.2-201ENSMUST00000226419 301 ntBASIC1.18□□□□□ -2.22
SmoP56726 Gm22809-201ENSMUST00000082743 156 ntBASIC1.18□□□□□ -2.22
SmoP56726 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SmoP56726 Gm24401-201ENSMUST00000157868 91 ntBASIC1.17□□□□□ -2.22
SmoP56726 Gm22485-201ENSMUST00000157990 109 ntBASIC1.17□□□□□ -2.22
SmoP56726 Gm22286-201ENSMUST00000179708 107 ntBASIC1.17□□□□□ -2.22
SmoP56726 Gm27894-201ENSMUST00000184177 92 ntBASIC1.17□□□□□ -2.22
SmoP56726 Gm18213-201ENSMUST00000207850 178 ntBASIC1.17□□□□□ -2.22
SmoP56726 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.17□□□□□ -2.22
SmoP56726 Gm10172-201ENSMUST00000085929 558 ntBASIC1.17□□□□□ -2.22
SmoP56726 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
SmoP56726 Gm24271-201ENSMUST00000102327 111 ntBASIC1.16□□□□□ -2.22
SmoP56726 Gm11644-201ENSMUST00000119735 150 ntBASIC1.16□□□□□ -2.22
SmoP56726 Gm22332-201ENSMUST00000158072 126 ntBASIC1.16□□□□□ -2.22
SmoP56726 Gm22129-201ENSMUST00000179034 107 ntBASIC1.16□□□□□ -2.22
SmoP56726 AC124739.2-201ENSMUST00000222201 109 ntBASIC1.16□□□□□ -2.22
SmoP56726 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.16□□□□□ -2.22
SmoP56726 Gm22980-201ENSMUST00000082608 70 ntBASIC1.16□□□□□ -2.22
SmoP56726 Mir324-201ENSMUST00000083600 89 ntBASIC1.16□□□□□ -2.22
SmoP56726 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
SmoP56726 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
SmoP56726 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
SmoP56726 Gm22796-201ENSMUST00000157234 106 ntBASIC1.15□□□□□ -2.23
SmoP56726 Gm22336-201ENSMUST00000157719 107 ntBASIC1.15□□□□□ -2.23
SmoP56726 Gm24747-201ENSMUST00000157835 87 ntBASIC1.15□□□□□ -2.23
SmoP56726 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
SmoP56726 Gm27446-201ENSMUST00000183963 89 ntBASIC1.15□□□□□ -2.23
SmoP56726 Gm27792-201ENSMUST00000184031 115 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 172.8 ms