Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm28418-201ENSMUST00000186179 423 ntBASIC-0.15□□□□□ -2.43
Fdft1P53798 Mir7227-201ENSMUST00000200408 59 ntBASIC-0.15□□□□□ -2.43
Fdft1P53798 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.15□□□□□ -2.43
Fdft1P53798 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
Fdft1P53798 Gm23783-201ENSMUST00000157941 102 ntBASIC-0.16□□□□□ -2.44
Fdft1P53798 Gm22448-201ENSMUST00000179254 107 ntBASIC-0.16□□□□□ -2.44
Fdft1P53798 Gm24488-201ENSMUST00000179934 127 ntBASIC-0.16□□□□□ -2.44
Fdft1P53798 Gm25701-201ENSMUST00000179988 127 ntBASIC-0.16□□□□□ -2.44
Fdft1P53798 Gm26431-201ENSMUST00000180199 127 ntBASIC-0.16□□□□□ -2.44
Fdft1P53798 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
Fdft1P53798 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.16□□□□□ -2.44
Fdft1P53798 Gm38109-201ENSMUST00000195386 181 ntBASIC-0.16□□□□□ -2.44
Fdft1P53798 Gm10172-201ENSMUST00000085929 558 ntBASIC-0.16□□□□□ -2.44
Fdft1P53798 Scarna9-201ENSMUST00000104318 70 ntBASIC-0.17□□□□□ -2.44
Fdft1P53798 Gm25496-201ENSMUST00000104430 120 ntBASIC-0.17□□□□□ -2.44
Fdft1P53798 Gm24555-201ENSMUST00000104548 124 ntBASIC-0.17□□□□□ -2.44
Fdft1P53798 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.17□□□□□ -2.44
Fdft1P53798 Gm27672-201ENSMUST00000183751 204 ntBASIC-0.17□□□□□ -2.44
Fdft1P53798 Gm27521-201ENSMUST00000184022 64 ntBASIC-0.17□□□□□ -2.44
Fdft1P53798 Mir8116-201ENSMUST00000184134 97 ntBASIC-0.17□□□□□ -2.44
Fdft1P53798 AC154552.1-201ENSMUST00000222969 202 ntBASIC-0.17□□□□□ -2.44
Fdft1P53798 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC-0.17□□□□□ -2.44
Fdft1P53798 Gm12924-201ENSMUST00000121747 318 ntBASIC-0.18□□□□□ -2.44
Fdft1P53798 Gm26158-201ENSMUST00000158973 119 ntBASIC-0.18□□□□□ -2.44
Fdft1P53798 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.18□□□□□ -2.44
Fdft1P53798 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.19□□□□□ -2.44
Fdft1P53798 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-0.19□□□□□ -2.44
Fdft1P53798 Gm13345-201ENSMUST00000121928 228 ntBASIC-0.19□□□□□ -2.44
Fdft1P53798 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.19□□□□□ -2.44
Fdft1P53798 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.19□□□□□ -2.44
Fdft1P53798 Mir7079-201ENSMUST00000184697 69 ntBASIC-0.19□□□□□ -2.44
Fdft1P53798 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.19□□□□□ -2.44
Fdft1P53798 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.19□□□□□ -2.44
Fdft1P53798 Snord85-201ENSMUST00000083262 73 ntBASIC-0.19□□□□□ -2.44
Fdft1P53798 Gm25235-201ENSMUST00000179933 107 ntBASIC-0.2□□□□□ -2.44
Fdft1P53798 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.2□□□□□ -2.44
Fdft1P53798 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.2□□□□□ -2.44
Fdft1P53798 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.2□□□□□ -2.44
Fdft1P53798 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.2□□□□□ -2.44
Fdft1P53798 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC-0.2□□□□□ -2.44
Fdft1P53798 Gm26447-201ENSMUST00000082448 129 ntBASIC-0.2□□□□□ -2.44
Fdft1P53798 Gm23406-201ENSMUST00000082537 122 ntBASIC-0.2□□□□□ -2.44
Fdft1P53798 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.2□□□□□ -2.44
Fdft1P53798 Gm24423-201ENSMUST00000101982 106 ntBASIC-0.21□□□□□ -2.44
Fdft1P53798 Gm24594-201ENSMUST00000122502 99 ntBASIC-0.21□□□□□ -2.44
Fdft1P53798 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.21□□□□□ -2.44
Fdft1P53798 Gm23219-201ENSMUST00000158123 87 ntBASIC-0.21□□□□□ -2.44
Fdft1P53798 Gm16550-201ENSMUST00000162550 126 ntBASIC-0.21□□□□□ -2.44
Fdft1P53798 Gm6003-201ENSMUST00000187903 463 ntBASIC-0.21□□□□□ -2.44
Fdft1P53798 Gm23531-201ENSMUST00000104567 68 ntBASIC-0.22□□□□□ -2.44
Fdft1P53798 Gm23881-201ENSMUST00000116872 66 ntBASIC-0.22□□□□□ -2.44
Fdft1P53798 Gm14567-201ENSMUST00000117155 174 ntBASIC-0.22□□□□□ -2.44
Fdft1P53798 Gm14301-201ENSMUST00000120181 324 ntBASIC-0.22□□□□□ -2.44
Fdft1P53798 Gm22088-201ENSMUST00000158341 117 ntBASIC-0.22□□□□□ -2.44
Fdft1P53798 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.22□□□□□ -2.44
Fdft1P53798 Mir3089-201ENSMUST00000175350 84 ntBASIC-0.22□□□□□ -2.44
Fdft1P53798 Mir6369-201ENSMUST00000183772 106 ntBASIC-0.22□□□□□ -2.44
Fdft1P53798 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.22□□□□□ -2.44
Fdft1P53798 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.22□□□□□ -2.44
Fdft1P53798 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.22□□□□□ -2.44
Fdft1P53798 Gm28211-201ENSMUST00000190920 315 ntBASIC-0.22□□□□□ -2.44
Fdft1P53798 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.22□□□□□ -2.44
Fdft1P53798 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
Fdft1P53798 AC192333.1-201ENSMUST00000224573 376 ntBASIC-0.22□□□□□ -2.44
Fdft1P53798 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-0.22□□□□□ -2.44
Fdft1P53798 Snord60-201ENSMUST00000082834 78 ntBASIC-0.22□□□□□ -2.44
Fdft1P53798 Gm22571-201ENSMUST00000082984 70 ntBASIC-0.22□□□□□ -2.44
Fdft1P53798 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.22□□□□□ -2.44
Fdft1P53798 Mir18-201ENSMUST00000083469 96 ntBASIC-0.22□□□□□ -2.44
Fdft1P53798 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.22□□□□□ -2.44
Fdft1P53798 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.23□□□□□ -2.45
Fdft1P53798 Gm24250-201ENSMUST00000157320 135 ntBASIC-0.23□□□□□ -2.45
Fdft1P53798 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.23□□□□□ -2.45
Fdft1P53798 Gm24006-201ENSMUST00000158462 132 ntBASIC-0.23□□□□□ -2.45
Fdft1P53798 Gm23186-201ENSMUST00000180078 107 ntBASIC-0.23□□□□□ -2.45
Fdft1P53798 Gm38364-201ENSMUST00000191814 179 ntBASIC-0.23□□□□□ -2.45
Fdft1P53798 Gm42795-201ENSMUST00000198847 76 ntBASIC-0.23□□□□□ -2.45
Fdft1P53798 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.23□□□□□ -2.45
Fdft1P53798 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC-0.23□□□□□ -2.45
Fdft1P53798 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.23□□□□□ -2.45
Fdft1P53798 Gm10222-201ENSMUST00000088336 294 ntBASIC-0.23□□□□□ -2.45
Fdft1P53798 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC-0.24□□□□□ -2.45
Fdft1P53798 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.24□□□□□ -2.45
Fdft1P53798 Gm28008-201ENSMUST00000184021 186 ntBASIC-0.24□□□□□ -2.45
Fdft1P53798 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.24□□□□□ -2.45
Fdft1P53798 Gm19790-201ENSMUST00000214414 251 ntBASIC-0.24□□□□□ -2.45
Fdft1P53798 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC-0.24□□□□□ -2.45
Fdft1P53798 Gm24867-201ENSMUST00000104161 107 ntBASIC-0.25□□□□□ -2.45
Fdft1P53798 Snord100-201ENSMUST00000116836 74 ntBASIC-0.25□□□□□ -2.45
Fdft1P53798 Gm15030-201ENSMUST00000119804 484 ntBASIC-0.25□□□□□ -2.45
Fdft1P53798 Gm25375-201ENSMUST00000158157 135 ntBASIC-0.25□□□□□ -2.45
Fdft1P53798 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.25□□□□□ -2.45
Fdft1P53798 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC-0.25□□□□□ -2.45
Fdft1P53798 Mir30f-201ENSMUST00000196073 92 ntBASIC-0.25□□□□□ -2.45
Fdft1P53798 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.25□□□□□ -2.45
Fdft1P53798 Gm45313-201ENSMUST00000210584 178 ntBASIC-0.25□□□□□ -2.45
Fdft1P53798 CT010505.1-201ENSMUST00000227026 396 ntBASIC-0.25□□□□□ -2.45
Fdft1P53798 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.25□□□□□ -2.45
Fdft1P53798 Gm11204-201ENSMUST00000122438 147 ntBASIC-0.26□□□□□ -2.45
Fdft1P53798 Gm23466-201ENSMUST00000157133 106 ntBASIC-0.26□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms