Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm23374-201ENSMUST00000175408 84 ntBASIC-0.99□□□□□ -2.57
Cux1P53564 Gm25314-201ENSMUST00000178810 79 ntBASIC-0.99□□□□□ -2.57
Cux1P53564 Gm23571-201ENSMUST00000180073 127 ntBASIC-0.99□□□□□ -2.57
Cux1P53564 Gm25078-201ENSMUST00000082530 107 ntBASIC-0.99□□□□□ -2.57
Cux1P53564 Gm26076-201ENSMUST00000104065 105 ntBASIC-0.99□□□□□ -2.57
Cux1P53564 Gm25109-201ENSMUST00000122474 114 ntBASIC-0.99□□□□□ -2.57
Cux1P53564 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.99□□□□□ -2.57
Cux1P53564 AC102369.1-201ENSMUST00000218415 373 ntBASIC-0.99□□□□□ -2.57
Cux1P53564 AC154484.1-201ENSMUST00000227311 771 ntBASIC-0.99□□□□□ -2.57
Cux1P53564 Gm26054-201ENSMUST00000083037 107 ntBASIC-0.99□□□□□ -2.57
Cux1P53564 Scarna9-201ENSMUST00000104318 70 ntBASIC-1□□□□□ -2.57
Cux1P53564 Gm12770-201ENSMUST00000121734 462 ntBASIC-1□□□□□ -2.57
Cux1P53564 Gm22553-201ENSMUST00000157797 295 ntBASIC-1□□□□□ -2.57
Cux1P53564 Gm16550-201ENSMUST00000162550 126 ntBASIC-1□□□□□ -2.57
Cux1P53564 Gm25328-201ENSMUST00000175013 107 ntBASIC-1□□□□□ -2.57
Cux1P53564 Gm44811-201ENSMUST00000209120 228 ntBASIC-1□□□□□ -2.57
Cux1P53564 Gm23442-201ENSMUST00000082919 134 ntBASIC-1□□□□□ -2.57
Cux1P53564 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC-1.01□□□□□ -2.57
Cux1P53564 Gm13801-201ENSMUST00000120750 160 ntBASIC-1.01□□□□□ -2.57
Cux1P53564 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC-1.01□□□□□ -2.57
Cux1P53564 Gm26108-201ENSMUST00000083973 191 ntBASIC-1.01□□□□□ -2.57
Cux1P53564 Gm15030-201ENSMUST00000119804 484 ntBASIC-1.02□□□□□ -2.57
Cux1P53564 Gm25249-201ENSMUST00000175471 78 ntBASIC-1.02□□□□□ -2.57
Cux1P53564 Gm25671-201ENSMUST00000178612 105 ntBASIC-1.02□□□□□ -2.57
Cux1P53564 Gm23307-201ENSMUST00000179167 105 ntBASIC-1.02□□□□□ -2.57
Cux1P53564 Gm25286-201ENSMUST00000179790 105 ntBASIC-1.02□□□□□ -2.57
Cux1P53564 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.02□□□□□ -2.57
Cux1P53564 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.02□□□□□ -2.57
Cux1P53564 Gm44909-201ENSMUST00000208756 165 ntBASIC-1.02□□□□□ -2.57
Cux1P53564 Gm23536-201ENSMUST00000157541 134 ntBASIC-1.03□□□□□ -2.57
Cux1P53564 Gm24009-201ENSMUST00000157734 93 ntBASIC-1.03□□□□□ -2.57
Cux1P53564 Gm22966-201ENSMUST00000157957 129 ntBASIC-1.03□□□□□ -2.57
Cux1P53564 Gm23770-201ENSMUST00000178009 108 ntBASIC-1.03□□□□□ -2.57
Cux1P53564 Gm22832-201ENSMUST00000178022 108 ntBASIC-1.03□□□□□ -2.57
Cux1P53564 Gm23863-201ENSMUST00000178265 108 ntBASIC-1.03□□□□□ -2.57
Cux1P53564 Gm24828-201ENSMUST00000178507 108 ntBASIC-1.03□□□□□ -2.57
Cux1P53564 Gm23052-201ENSMUST00000178633 108 ntBASIC-1.03□□□□□ -2.57
Cux1P53564 Gm25729-201ENSMUST00000179050 108 ntBASIC-1.03□□□□□ -2.57
Cux1P53564 Gm25359-201ENSMUST00000179315 108 ntBASIC-1.03□□□□□ -2.57
Cux1P53564 Gm22624-201ENSMUST00000179913 108 ntBASIC-1.03□□□□□ -2.57
Cux1P53564 Gm27410-201ENSMUST00000183851 115 ntBASIC-1.03□□□□□ -2.57
Cux1P53564 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC-1.03□□□□□ -2.57
Cux1P53564 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC-1.03□□□□□ -2.57
Cux1P53564 Gm25579-201ENSMUST00000083407 106 ntBASIC-1.03□□□□□ -2.57
Cux1P53564 Mir463-201ENSMUST00000093570 75 ntBASIC-1.03□□□□□ -2.57
Cux1P53564 Gm12469-201ENSMUST00000117623 207 ntBASIC-1.04□□□□□ -2.58
Cux1P53564 Gm23660-201ENSMUST00000178362 79 ntBASIC-1.04□□□□□ -2.58
Cux1P53564 Gm25935-201ENSMUST00000178746 107 ntBASIC-1.04□□□□□ -2.58
Cux1P53564 Gm24088-201ENSMUST00000179100 79 ntBASIC-1.04□□□□□ -2.58
Cux1P53564 Gm37750-201ENSMUST00000193563 129 ntBASIC-1.04□□□□□ -2.58
Cux1P53564 AC116589.3-202ENSMUST00000221770 649 ntBASIC-1.04□□□□□ -2.58
Cux1P53564 AC116589.6-201ENSMUST00000222252 649 ntBASIC-1.04□□□□□ -2.58
Cux1P53564 Gm26329-201ENSMUST00000093723 110 ntBASIC-1.04□□□□□ -2.58
Cux1P53564 Gm12584-201ENSMUST00000117109 1105 ntBASIC-1.05□□□□□ -2.58
Cux1P53564 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC-1.05□□□□□ -2.58
Cux1P53564 Gm24141-201ENSMUST00000122776 115 ntBASIC-1.05□□□□□ -2.58
Cux1P53564 Gm28917-201ENSMUST00000187294 237 ntBASIC-1.05□□□□□ -2.58
Cux1P53564 Gm37313-201ENSMUST00000191673 290 ntBASIC-1.05□□□□□ -2.58
Cux1P53564 AC153541.1-201ENSMUST00000213786 294 ntBASIC-1.05□□□□□ -2.58
Cux1P53564 AC125311.1-201ENSMUST00000226950 220 ntBASIC-1.05□□□□□ -2.58
Cux1P53564 Snora16a-201ENSMUST00000083163 136 ntBASIC-1.05□□□□□ -2.58
Cux1P53564 Gm25040-201ENSMUST00000103877 66 ntBASIC-1.05□□□□□ -2.58
Cux1P53564 Gm25323-201ENSMUST00000122555 103 ntBASIC-1.05□□□□□ -2.58
Cux1P53564 Gm45402-201ENSMUST00000211796 223 ntBASIC-1.05□□□□□ -2.58
Cux1P53564 AL929265.1-201ENSMUST00000213427 125 ntBASIC-1.05□□□□□ -2.58
Cux1P53564 Gm22841-201ENSMUST00000158443 62 ntBASIC-1.06□□□□□ -2.58
Cux1P53564 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-1.07□□□□□ -2.58
Cux1P53564 Gm24635-201ENSMUST00000122712 128 ntBASIC-1.07□□□□□ -2.58
Cux1P53564 Gm22598-201ENSMUST00000157600 127 ntBASIC-1.07□□□□□ -2.58
Cux1P53564 Gm22085-201ENSMUST00000158344 110 ntBASIC-1.07□□□□□ -2.58
Cux1P53564 Gm23191-201ENSMUST00000179147 107 ntBASIC-1.07□□□□□ -2.58
Cux1P53564 Gm26180-201ENSMUST00000179942 107 ntBASIC-1.07□□□□□ -2.58
Cux1P53564 Mir376a-201ENSMUST00000197584 68 ntBASIC-1.07□□□□□ -2.58
Cux1P53564 Gm26018-201ENSMUST00000104406 128 ntBASIC-1.08□□□□□ -2.58
Cux1P53564 Mir6369-201ENSMUST00000183772 106 ntBASIC-1.08□□□□□ -2.58
Cux1P53564 Gm37763-201ENSMUST00000193445 120 ntBASIC-1.08□□□□□ -2.58
Cux1P53564 Gm24453-201ENSMUST00000083346 76 ntBASIC-1.08□□□□□ -2.58
Cux1P53564 n-R5s8-201ENSMUST00000104121 118 ntBASIC-1.09□□□□□ -2.58
Cux1P53564 Gm9227-201ENSMUST00000194733 566 ntBASIC-1.09□□□□□ -2.58
Cux1P53564 AC125374.2-201ENSMUST00000214278 162 ntBASIC-1.09□□□□□ -2.58
Cux1P53564 AC132437.1-201ENSMUST00000218308 320 ntBASIC-1.09□□□□□ -2.58
Cux1P53564 Gm24037-201ENSMUST00000082871 180 ntBASIC-1.09□□□□□ -2.58
Cux1P53564 Gm24593-201ENSMUST00000122507 106 ntBASIC-1.1□□□□□ -2.58
Cux1P53564 Gm23212-201ENSMUST00000122718 60 ntBASIC-1.1□□□□□ -2.58
Cux1P53564 Gm26290-201ENSMUST00000158891 145 ntBASIC-1.1□□□□□ -2.58
Cux1P53564 Gm24761-201ENSMUST00000179589 127 ntBASIC-1.1□□□□□ -2.58
Cux1P53564 Gm27957-201ENSMUST00000184054 127 ntBASIC-1.1□□□□□ -2.58
Cux1P53564 AC116589.4-201ENSMUST00000222390 216 ntBASIC-1.1□□□□□ -2.58
Cux1P53564 Gm25797-201ENSMUST00000082640 107 ntBASIC-1.1□□□□□ -2.58
Cux1P53564 Gm26495-201ENSMUST00000083152 137 ntBASIC-1.1□□□□□ -2.58
Cux1P53564 Gm14626-201ENSMUST00000117619 216 ntBASIC-1.1□□□□□ -2.59
Cux1P53564 Gm22118-201ENSMUST00000175593 171 ntBASIC-1.1□□□□□ -2.59
Cux1P53564 Gm18665-201ENSMUST00000189783 270 ntBASIC-1.1□□□□□ -2.59
Cux1P53564 AC164297.5-201ENSMUST00000224365 198 ntBASIC-1.1□□□□□ -2.59
Cux1P53564 AC132918.1-201ENSMUST00000227877 925 ntBASIC-1.1□□□□□ -2.59
Cux1P53564 Mir363-201ENSMUST00000093598 75 ntBASIC-1.1□□□□□ -2.59
Cux1P53564 Mir496a-201ENSMUST00000093627 79 ntBASIC-1.1□□□□□ -2.59
Cux1P53564 Gm22771-201ENSMUST00000104449 91 ntBASIC-1.11□□□□□ -2.59
Cux1P53564 Gm14574-201ENSMUST00000120644 279 ntBASIC-1.11□□□□□ -2.59
Cux1P53564 Gm15654-201ENSMUST00000152660 300 ntBASIC-1.11□□□□□ -2.59
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms