Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.43□□□□□ -2.48
Cdx2P43241 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.43□□□□□ -2.48
Cdx2P43241 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.43□□□□□ -2.48
Cdx2P43241 Gm28579-201ENSMUST00000186143 369 ntBASIC-0.43□□□□□ -2.48
Cdx2P43241 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.43□□□□□ -2.48
Cdx2P43241 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.43□□□□□ -2.48
Cdx2P43241 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.43□□□□□ -2.48
Cdx2P43241 Gm44959-201ENSMUST00000209127 231 ntBASIC-0.43□□□□□ -2.48
Cdx2P43241 CT025526.1-201ENSMUST00000217327 267 ntBASIC-0.43□□□□□ -2.48
Cdx2P43241 AC159619.2-201ENSMUST00000222924 401 ntBASIC-0.43□□□□□ -2.48
Cdx2P43241 AC162857.1-201ENSMUST00000226614 400 ntBASIC-0.43□□□□□ -2.48
Cdx2P43241 Gm11834-201ENSMUST00000122257 585 ntBASIC-0.44□□□□□ -2.48
Cdx2P43241 Gm22097-201ENSMUST00000157929 278 ntBASIC-0.44□□□□□ -2.48
Cdx2P43241 Gm26158-201ENSMUST00000158973 119 ntBASIC-0.44□□□□□ -2.48
Cdx2P43241 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC-0.44□□□□□ -2.48
Cdx2P43241 Gm27539-201ENSMUST00000184971 224 ntBASIC-0.44□□□□□ -2.48
Cdx2P43241 Gm37338-201ENSMUST00000191986 127 ntBASIC-0.44□□□□□ -2.48
Cdx2P43241 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.44□□□□□ -2.48
Cdx2P43241 AC116460.1-201ENSMUST00000219040 313 ntBASIC-0.44□□□□□ -2.48
Cdx2P43241 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.44□□□□□ -2.48
Cdx2P43241 Gm25929-201ENSMUST00000082784 107 ntBASIC-0.44□□□□□ -2.48
Cdx2P43241 Snord60-201ENSMUST00000082834 78 ntBASIC-0.44□□□□□ -2.48
Cdx2P43241 Gm24275-201ENSMUST00000116780 146 ntBASIC-0.45□□□□□ -2.48
Cdx2P43241 Gm22489-201ENSMUST00000116813 62 ntBASIC-0.45□□□□□ -2.48
Cdx2P43241 Gm22337-201ENSMUST00000157721 132 ntBASIC-0.45□□□□□ -2.48
Cdx2P43241 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC-0.45□□□□□ -2.48
Cdx2P43241 Gm28849-201ENSMUST00000188127 174 ntBASIC-0.45□□□□□ -2.48
Cdx2P43241 Gm38280-201ENSMUST00000192610 158 ntBASIC-0.45□□□□□ -2.48
Cdx2P43241 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.45□□□□□ -2.48
Cdx2P43241 Gm24204-201ENSMUST00000082950 107 ntBASIC-0.45□□□□□ -2.48
Cdx2P43241 Gm24453-201ENSMUST00000083346 76 ntBASIC-0.45□□□□□ -2.48
Cdx2P43241 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.45□□□□□ -2.48
Cdx2P43241 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.45□□□□□ -2.48
Cdx2P43241 Gm23881-201ENSMUST00000116872 66 ntBASIC-0.46□□□□□ -2.48
Cdx2P43241 Gm13922-201ENSMUST00000119505 156 ntBASIC-0.46□□□□□ -2.48
Cdx2P43241 Gm26482-201ENSMUST00000158015 62 ntBASIC-0.46□□□□□ -2.48
Cdx2P43241 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.46□□□□□ -2.48
Cdx2P43241 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.46□□□□□ -2.48
Cdx2P43241 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC-0.46□□□□□ -2.48
Cdx2P43241 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC-0.46□□□□□ -2.48
Cdx2P43241 Gm25828-201ENSMUST00000157087 95 ntBASIC-0.47□□□□□ -2.48
Cdx2P43241 Gm23779-201ENSMUST00000157938 64 ntBASIC-0.47□□□□□ -2.48
Cdx2P43241 Gm22767-201ENSMUST00000158365 165 ntBASIC-0.47□□□□□ -2.48
Cdx2P43241 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.47□□□□□ -2.48
Cdx2P43241 Gm23793-201ENSMUST00000179396 117 ntBASIC-0.47□□□□□ -2.48
Cdx2P43241 Mir6369-201ENSMUST00000183772 106 ntBASIC-0.47□□□□□ -2.48
Cdx2P43241 Scarna9-201ENSMUST00000104318 70 ntBASIC-0.48□□□□□ -2.49
Cdx2P43241 Gm24393-201ENSMUST00000158135 97 ntBASIC-0.48□□□□□ -2.49
Cdx2P43241 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.48□□□□□ -2.49
Cdx2P43241 Gm38050-201ENSMUST00000191904 238 ntBASIC-0.48□□□□□ -2.49
Cdx2P43241 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.49□□□□□ -2.49
Cdx2P43241 Gm24635-201ENSMUST00000122712 128 ntBASIC-0.49□□□□□ -2.49
Cdx2P43241 Gm25827-201ENSMUST00000157089 107 ntBASIC-0.49□□□□□ -2.49
Cdx2P43241 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.49□□□□□ -2.49
Cdx2P43241 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.49□□□□□ -2.49
Cdx2P43241 Mir669k-201ENSMUST00000177742 127 ntBASIC-0.49□□□□□ -2.49
Cdx2P43241 Gm24488-201ENSMUST00000179934 127 ntBASIC-0.49□□□□□ -2.49
Cdx2P43241 Gm25673-201ENSMUST00000179957 127 ntBASIC-0.49□□□□□ -2.49
Cdx2P43241 Gm25701-201ENSMUST00000179988 127 ntBASIC-0.49□□□□□ -2.49
Cdx2P43241 Gm26431-201ENSMUST00000180199 127 ntBASIC-0.49□□□□□ -2.49
Cdx2P43241 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.49□□□□□ -2.49
Cdx2P43241 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.49□□□□□ -2.49
Cdx2P43241 Gm25142-201ENSMUST00000082698 107 ntBASIC-0.49□□□□□ -2.49
Cdx2P43241 Gm14307-201ENSMUST00000118930 291 ntBASIC-0.5□□□□□ -2.49
Cdx2P43241 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.5□□□□□ -2.49
Cdx2P43241 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.5□□□□□ -2.49
Cdx2P43241 Gm14297-201ENSMUST00000129110 291 ntBASIC-0.5□□□□□ -2.49
Cdx2P43241 Gm16362-201ENSMUST00000135189 214 ntBASIC-0.5□□□□□ -2.49
Cdx2P43241 Gm22999-201ENSMUST00000157082 88 ntBASIC-0.5□□□□□ -2.49
Cdx2P43241 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.5□□□□□ -2.49
Cdx2P43241 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.5□□□□□ -2.49
Cdx2P43241 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.5□□□□□ -2.49
Cdx2P43241 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.5□□□□□ -2.49
Cdx2P43241 Gm28418-201ENSMUST00000186179 423 ntBASIC-0.5□□□□□ -2.49
Cdx2P43241 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.5□□□□□ -2.49
Cdx2P43241 AC159896.1-201ENSMUST00000215264 215 ntBASIC-0.5□□□□□ -2.49
Cdx2P43241 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.5□□□□□ -2.49
Cdx2P43241 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-0.5□□□□□ -2.49
Cdx2P43241 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
Cdx2P43241 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.51□□□□□ -2.49
Cdx2P43241 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.51□□□□□ -2.49
Cdx2P43241 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.51□□□□□ -2.49
Cdx2P43241 Gm43624-201ENSMUST00000197368 180 ntBASIC-0.51□□□□□ -2.49
Cdx2P43241 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.51□□□□□ -2.49
Cdx2P43241 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.51□□□□□ -2.49
Cdx2P43241 Mir363-201ENSMUST00000093598 75 ntBASIC-0.51□□□□□ -2.49
Cdx2P43241 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-0.52□□□□□ -2.49
Cdx2P43241 Gm25323-201ENSMUST00000122555 103 ntBASIC-0.52□□□□□ -2.49
Cdx2P43241 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.52□□□□□ -2.49
Cdx2P43241 Gm7240-201ENSMUST00000220769 664 ntBASIC-0.52□□□□□ -2.49
Cdx2P43241 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.52□□□□□ -2.49
Cdx2P43241 Gm23412-201ENSMUST00000083017 107 ntBASIC-0.52□□□□□ -2.49
Cdx2P43241 Gm25937-201ENSMUST00000083912 107 ntBASIC-0.52□□□□□ -2.49
Cdx2P43241 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.53□□□□□ -2.49
Cdx2P43241 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.53□□□□□ -2.49
Cdx2P43241 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.53□□□□□ -2.49
Cdx2P43241 Gm37313-201ENSMUST00000191673 290 ntBASIC-0.53□□□□□ -2.49
Cdx2P43241 Gm24035-201ENSMUST00000082867 107 ntBASIC-0.53□□□□□ -2.49
Cdx2P43241 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC-0.53□□□□□ -2.49
Cdx2P43241 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 76,532 protein–RNA pairs in 198 ms