Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Gm22753-201ENSMUST00000083657 107 ntBASIC0.08□□□□□ -2.4
VhlP40338 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.08□□□□□ -2.4
VhlP40338 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.08□□□□□ -2.4
VhlP40338 Gm26293-201ENSMUST00000104170 84 ntBASIC0.07□□□□□ -2.4
VhlP40338 Gm22051-201ENSMUST00000117002 127 ntBASIC0.07□□□□□ -2.4
VhlP40338 Gm6952-201ENSMUST00000118629 159 ntBASIC0.07□□□□□ -2.4
VhlP40338 Gm24594-201ENSMUST00000122502 99 ntBASIC0.07□□□□□ -2.4
VhlP40338 Gm23036-201ENSMUST00000157885 99 ntBASIC0.07□□□□□ -2.4
VhlP40338 Mir6390-201ENSMUST00000184405 129 ntBASIC0.07□□□□□ -2.4
VhlP40338 Gm37845-201ENSMUST00000194977 355 ntBASIC0.07□□□□□ -2.4
VhlP40338 Gm44457-201ENSMUST00000198109 76 ntBASIC0.07□□□□□ -2.4
VhlP40338 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.07□□□□□ -2.4
VhlP40338 Gm26447-201ENSMUST00000082448 129 ntBASIC0.07□□□□□ -2.4
VhlP40338 Mir181b-2-201ENSMUST00000083644 89 ntBASIC0.07□□□□□ -2.4
VhlP40338 Gm22576-201ENSMUST00000083733 104 ntBASIC0.07□□□□□ -2.4
VhlP40338 Gm10222-201ENSMUST00000088336 294 ntBASIC0.07□□□□□ -2.4
VhlP40338 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
VhlP40338 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
VhlP40338 Gm14039-201ENSMUST00000118705 101 ntBASIC0.06□□□□□ -2.4
VhlP40338 Gm13345-201ENSMUST00000121928 228 ntBASIC0.06□□□□□ -2.4
VhlP40338 Gm25444-201ENSMUST00000158999 113 ntBASIC0.06□□□□□ -2.4
VhlP40338 Gm25952-201ENSMUST00000175329 74 ntBASIC0.06□□□□□ -2.4
VhlP40338 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
VhlP40338 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC0.06□□□□□ -2.4
VhlP40338 Mir200a-201ENSMUST00000083466 90 ntBASIC0.06□□□□□ -2.4
VhlP40338 Mir382-201ENSMUST00000083494 76 ntBASIC0.06□□□□□ -2.4
VhlP40338 Mir875-201ENSMUST00000104698 78 ntBASIC0.05□□□□□ -2.4
VhlP40338 Gm11204-201ENSMUST00000122438 147 ntBASIC0.05□□□□□ -2.4
VhlP40338 Gm23214-201ENSMUST00000122716 157 ntBASIC0.05□□□□□ -2.4
VhlP40338 Gm23466-201ENSMUST00000157133 106 ntBASIC0.05□□□□□ -2.4
VhlP40338 Gm23821-201ENSMUST00000158738 106 ntBASIC0.05□□□□□ -2.4
VhlP40338 Gm23020-201ENSMUST00000158766 253 ntBASIC0.05□□□□□ -2.4
VhlP40338 Gm28016-201ENSMUST00000184594 196 ntBASIC0.05□□□□□ -2.4
VhlP40338 Gm44345-201ENSMUST00000199560 135 ntBASIC0.05□□□□□ -2.4
VhlP40338 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.05□□□□□ -2.4
VhlP40338 Gm22048-201ENSMUST00000104721 89 ntBASIC0.04□□□□□ -2.4
VhlP40338 Gm22479-201ENSMUST00000122566 81 ntBASIC0.04□□□□□ -2.4
VhlP40338 Gm24006-201ENSMUST00000158462 132 ntBASIC0.04□□□□□ -2.4
VhlP40338 Gm25771-201ENSMUST00000158565 144 ntBASIC0.04□□□□□ -2.4
VhlP40338 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.04□□□□□ -2.4
VhlP40338 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC0.04□□□□□ -2.4
VhlP40338 Gm38208-201ENSMUST00000192476 114 ntBASIC0.04□□□□□ -2.4
VhlP40338 Mir7229-201ENSMUST00000197062 53 ntBASIC0.04□□□□□ -2.4
VhlP40338 Gm10172-201ENSMUST00000085929 558 ntBASIC0.04□□□□□ -2.4
VhlP40338 Mir670-201ENSMUST00000102380 100 ntBASIC0.03□□□□□ -2.4
VhlP40338 Gm24867-201ENSMUST00000104161 107 ntBASIC0.03□□□□□ -2.4
VhlP40338 Gm23749-201ENSMUST00000104223 131 ntBASIC0.03□□□□□ -2.4
VhlP40338 Gm14792-201ENSMUST00000119725 258 ntBASIC0.03□□□□□ -2.4
VhlP40338 Gm22999-201ENSMUST00000157082 88 ntBASIC0.03□□□□□ -2.4
VhlP40338 Mir100-201ENSMUST00000175270 80 ntBASIC0.03□□□□□ -2.4
VhlP40338 Gm27672-201ENSMUST00000183751 204 ntBASIC0.03□□□□□ -2.4
VhlP40338 Gm27747-201ENSMUST00000184707 85 ntBASIC0.03□□□□□ -2.4
VhlP40338 Gm6003-201ENSMUST00000187903 463 ntBASIC0.03□□□□□ -2.4
VhlP40338 Gm28767-201ENSMUST00000188601 114 ntBASIC0.03□□□□□ -2.4
VhlP40338 Gm37330-201ENSMUST00000192606 153 ntBASIC0.03□□□□□ -2.4
VhlP40338 Gm37715-201ENSMUST00000193206 235 ntBASIC0.03□□□□□ -2.4
VhlP40338 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.03□□□□□ -2.4
VhlP40338 Gm24929-201ENSMUST00000083403 139 ntBASIC0.03□□□□□ -2.4
VhlP40338 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.03□□□□□ -2.4
VhlP40338 Gm24030-201ENSMUST00000083931 164 ntBASIC0.03□□□□□ -2.4
VhlP40338 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.02□□□□□ -2.41
VhlP40338 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.02□□□□□ -2.41
VhlP40338 Gm22836-201ENSMUST00000158441 61 ntBASIC0.02□□□□□ -2.41
VhlP40338 Gm25935-201ENSMUST00000178746 107 ntBASIC0.02□□□□□ -2.41
VhlP40338 Mir8107-201ENSMUST00000184024 117 ntBASIC0.02□□□□□ -2.41
VhlP40338 Gm29107-201ENSMUST00000190910 347 ntBASIC0.02□□□□□ -2.41
VhlP40338 Gm44455-201ENSMUST00000200061 82 ntBASIC0.02□□□□□ -2.41
VhlP40338 Gm19790-201ENSMUST00000214414 251 ntBASIC0.02□□□□□ -2.41
VhlP40338 Gm24460-201ENSMUST00000082731 106 ntBASIC0.02□□□□□ -2.41
VhlP40338 Gm25512-201ENSMUST00000083863 107 ntBASIC0.02□□□□□ -2.41
VhlP40338 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.02□□□□□ -2.41
VhlP40338 Mir466f-3-201ENSMUST00000104788 94 ntBASIC0.01□□□□□ -2.41
VhlP40338 Gm25848-201ENSMUST00000116790 144 ntBASIC0.01□□□□□ -2.41
VhlP40338 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.01□□□□□ -2.41
VhlP40338 Gm23581-201ENSMUST00000158531 63 ntBASIC0.01□□□□□ -2.41
VhlP40338 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.01□□□□□ -2.41
VhlP40338 Gm17919-201ENSMUST00000173344 312 ntBASIC0.01□□□□□ -2.41
VhlP40338 Mir669k-201ENSMUST00000177742 127 ntBASIC0.01□□□□□ -2.41
VhlP40338 Gm24488-201ENSMUST00000179934 127 ntBASIC0.01□□□□□ -2.41
VhlP40338 Gm25673-201ENSMUST00000179957 127 ntBASIC0.01□□□□□ -2.41
VhlP40338 Gm25701-201ENSMUST00000179988 127 ntBASIC0.01□□□□□ -2.41
VhlP40338 Gm26431-201ENSMUST00000180199 127 ntBASIC0.01□□□□□ -2.41
VhlP40338 Mir6336-201ENSMUST00000183581 130 ntBASIC0.01□□□□□ -2.41
VhlP40338 Gm27993-201ENSMUST00000184362 85 ntBASIC0.01□□□□□ -2.41
VhlP40338 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
VhlP40338 Gm25894-201ENSMUST00000083458 75 ntBASIC0.01□□□□□ -2.41
VhlP40338 Mir377-201ENSMUST00000083504 68 ntBASIC0.01□□□□□ -2.41
VhlP40338 Gm25111-201ENSMUST00000116686 147 ntBASIC0□□□□□ -2.41
VhlP40338 Mir1899-201ENSMUST00000122798 96 ntBASIC0□□□□□ -2.41
VhlP40338 Gm22815-201ENSMUST00000157451 62 ntBASIC0□□□□□ -2.41
VhlP40338 Gm22216-201ENSMUST00000157557 114 ntBASIC0□□□□□ -2.41
VhlP40338 Gm28001-201ENSMUST00000183561 117 ntBASIC0□□□□□ -2.41
VhlP40338 Gm27585-201ENSMUST00000183717 199 ntBASIC0□□□□□ -2.41
VhlP40338 Mir6369-201ENSMUST00000183772 106 ntBASIC0□□□□□ -2.41
VhlP40338 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0□□□□□ -2.41
VhlP40338 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0□□□□□ -2.41
VhlP40338 Gm8508-201ENSMUST00000061226 363 ntBASIC0□□□□□ -2.41
VhlP40338 Snord95-201ENSMUST00000082846 68 ntBASIC0□□□□□ -2.41
VhlP40338 Mir181a-2-201ENSMUST00000083489 76 ntBASIC0□□□□□ -2.41
VhlP40338 Mir411-201ENSMUST00000083543 82 ntBASIC0□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 180.7 ms