Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm22999-201ENSMUST00000157082 88 ntBASIC0.55□□□□□ -2.32
Cd40lgP27548 Gm24729-201ENSMUST00000158225 137 ntBASIC0.55□□□□□ -2.32
Cd40lgP27548 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.55□□□□□ -2.32
Cd40lgP27548 Mir6364-201ENSMUST00000183396 86 ntBASIC0.55□□□□□ -2.32
Cd40lgP27548 Gm28435-201ENSMUST00000185496 108 ntBASIC0.55□□□□□ -2.32
Cd40lgP27548 Gm23321-201ENSMUST00000104465 126 ntBASIC0.54□□□□□ -2.32
Cd40lgP27548 Gm6952-201ENSMUST00000118629 159 ntBASIC0.54□□□□□ -2.32
Cd40lgP27548 Gm22482-201ENSMUST00000122563 359 ntBASIC0.54□□□□□ -2.32
Cd40lgP27548 Gm23545-201ENSMUST00000158205 104 ntBASIC0.54□□□□□ -2.32
Cd40lgP27548 Mir1933-201ENSMUST00000158930 88 ntBASIC0.54□□□□□ -2.32
Cd40lgP27548 Mir6377-201ENSMUST00000183760 114 ntBASIC0.54□□□□□ -2.32
Cd40lgP27548 Gm26326-201ENSMUST00000083070 129 ntBASIC0.54□□□□□ -2.32
Cd40lgP27548 Gm26123-201ENSMUST00000083363 135 ntBASIC0.54□□□□□ -2.32
Cd40lgP27548 Mir186-201ENSMUST00000083497 71 ntBASIC0.54□□□□□ -2.32
Cd40lgP27548 Snord33-201ENSMUST00000083694 84 ntBASIC0.54□□□□□ -2.32
Cd40lgP27548 Mir500-201ENSMUST00000093600 92 ntBASIC0.54□□□□□ -2.32
Cd40lgP27548 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
Cd40lgP27548 Gm25654-201ENSMUST00000158467 88 ntBASIC0.53□□□□□ -2.32
Cd40lgP27548 Gm22887-201ENSMUST00000178586 107 ntBASIC0.53□□□□□ -2.32
Cd40lgP27548 Gm23141-201ENSMUST00000178682 94 ntBASIC0.53□□□□□ -2.32
Cd40lgP27548 Gm27332-201ENSMUST00000184893 112 ntBASIC0.53□□□□□ -2.32
Cd40lgP27548 Gm36956-201ENSMUST00000193830 214 ntBASIC0.53□□□□□ -2.32
Cd40lgP27548 Gm44409-201ENSMUST00000198810 166 ntBASIC0.53□□□□□ -2.32
Cd40lgP27548 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.53□□□□□ -2.32
Cd40lgP27548 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.53□□□□□ -2.32
Cd40lgP27548 Gm23347-201ENSMUST00000083823 82 ntBASIC0.53□□□□□ -2.32
Cd40lgP27548 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
Cd40lgP27548 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
Cd40lgP27548 Gm24276-201ENSMUST00000102181 110 ntBASIC0.52□□□□□ -2.33
Cd40lgP27548 Mir466p-201ENSMUST00000103925 89 ntBASIC0.52□□□□□ -2.33
Cd40lgP27548 Gm23126-201ENSMUST00000104260 134 ntBASIC0.52□□□□□ -2.33
Cd40lgP27548 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC0.52□□□□□ -2.33
Cd40lgP27548 Gm16265-201ENSMUST00000134558 108 ntBASIC0.52□□□□□ -2.33
Cd40lgP27548 Gm25882-201ENSMUST00000157784 85 ntBASIC0.52□□□□□ -2.33
Cd40lgP27548 Gm23763-201ENSMUST00000158345 60 ntBASIC0.52□□□□□ -2.33
Cd40lgP27548 Gm24547-201ENSMUST00000158649 149 ntBASIC0.52□□□□□ -2.33
Cd40lgP27548 Gm26236-201ENSMUST00000175536 137 ntBASIC0.52□□□□□ -2.33
Cd40lgP27548 Gm37997-201ENSMUST00000193515 267 ntBASIC0.52□□□□□ -2.33
Cd40lgP27548 Gm44462-201ENSMUST00000199696 129 ntBASIC0.52□□□□□ -2.33
Cd40lgP27548 Gm24527-201ENSMUST00000082920 107 ntBASIC0.52□□□□□ -2.33
Cd40lgP27548 Gm25378-201ENSMUST00000104333 129 ntBASIC0.51□□□□□ -2.33
Cd40lgP27548 Gm24509-201ENSMUST00000157086 101 ntBASIC0.51□□□□□ -2.33
Cd40lgP27548 Gm25358-201ENSMUST00000157189 101 ntBASIC0.51□□□□□ -2.33
Cd40lgP27548 Gm22796-201ENSMUST00000157234 106 ntBASIC0.51□□□□□ -2.33
Cd40lgP27548 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.51□□□□□ -2.33
Cd40lgP27548 Gm25611-201ENSMUST00000104017 133 ntBASIC0.5□□□□□ -2.33
Cd40lgP27548 Gm22786-201ENSMUST00000104086 122 ntBASIC0.5□□□□□ -2.33
Cd40lgP27548 Gm25110-201ENSMUST00000116684 121 ntBASIC0.5□□□□□ -2.33
Cd40lgP27548 Gm25775-201ENSMUST00000116716 121 ntBASIC0.5□□□□□ -2.33
Cd40lgP27548 Gm24795-201ENSMUST00000116737 121 ntBASIC0.5□□□□□ -2.33
Cd40lgP27548 Mir669g-201ENSMUST00000116809 123 ntBASIC0.5□□□□□ -2.33
Cd40lgP27548 Gm25171-201ENSMUST00000116926 121 ntBASIC0.5□□□□□ -2.33
Cd40lgP27548 Gm23853-201ENSMUST00000158375 104 ntBASIC0.5□□□□□ -2.33
Cd40lgP27548 Gm25364-201ENSMUST00000158851 107 ntBASIC0.5□□□□□ -2.33
Cd40lgP27548 Gm26285-201ENSMUST00000177923 107 ntBASIC0.5□□□□□ -2.33
Cd40lgP27548 Gm23622-201ENSMUST00000082460 107 ntBASIC0.5□□□□□ -2.33
Cd40lgP27548 Gm24258-201ENSMUST00000083739 133 ntBASIC0.5□□□□□ -2.33
Cd40lgP27548 Gm22815-201ENSMUST00000157451 62 ntBASIC0.49□□□□□ -2.33
Cd40lgP27548 Gm27579-201ENSMUST00000158113 63 ntBASIC0.49□□□□□ -2.33
Cd40lgP27548 Gm23567-201ENSMUST00000178005 107 ntBASIC0.49□□□□□ -2.33
Cd40lgP27548 Gm44488-201ENSMUST00000199467 119 ntBASIC0.49□□□□□ -2.33
Cd40lgP27548 AC192091.2-201ENSMUST00000217869 117 ntBASIC0.49□□□□□ -2.33
Cd40lgP27548 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.49□□□□□ -2.33
Cd40lgP27548 Gm23140-201ENSMUST00000082487 107 ntBASIC0.49□□□□□ -2.33
Cd40lgP27548 Gm22302-201ENSMUST00000082657 106 ntBASIC0.49□□□□□ -2.33
Cd40lgP27548 Gm25138-201ENSMUST00000083248 136 ntBASIC0.49□□□□□ -2.33
Cd40lgP27548 Gm22738-201ENSMUST00000083440 147 ntBASIC0.49□□□□□ -2.33
Cd40lgP27548 Mir30a-201ENSMUST00000083471 71 ntBASIC0.49□□□□□ -2.33
Cd40lgP27548 Gm26156-201ENSMUST00000116999 123 ntBASIC0.48□□□□□ -2.33
Cd40lgP27548 Gm24385-201ENSMUST00000122694 350 ntBASIC0.48□□□□□ -2.33
Cd40lgP27548 Gm23605-201ENSMUST00000157255 127 ntBASIC0.48□□□□□ -2.33
Cd40lgP27548 Gm22850-201ENSMUST00000157714 82 ntBASIC0.48□□□□□ -2.33
Cd40lgP27548 Gm22675-201ENSMUST00000158430 104 ntBASIC0.48□□□□□ -2.33
Cd40lgP27548 Gm25769-201ENSMUST00000158569 127 ntBASIC0.48□□□□□ -2.33
Cd40lgP27548 Mir7079-201ENSMUST00000184697 69 ntBASIC0.48□□□□□ -2.33
Cd40lgP27548 Mir219b-201ENSMUST00000198317 65 ntBASIC0.48□□□□□ -2.33
Cd40lgP27548 Gm8219-201ENSMUST00000218309 242 ntBASIC0.48□□□□□ -2.33
Cd40lgP27548 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.48□□□□□ -2.33
Cd40lgP27548 AC122320.1-201ENSMUST00000227233 105 ntBASIC0.48□□□□□ -2.33
Cd40lgP27548 Gm25787-201ENSMUST00000104709 92 ntBASIC0.47□□□□□ -2.33
Cd40lgP27548 Gm14946-201ENSMUST00000119859 296 ntBASIC0.47□□□□□ -2.33
Cd40lgP27548 Gm6272-201ENSMUST00000121256 171 ntBASIC0.47□□□□□ -2.33
Cd40lgP27548 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
Cd40lgP27548 Gm25390-201ENSMUST00000157341 103 ntBASIC0.47□□□□□ -2.33
Cd40lgP27548 Gm25184-201ENSMUST00000157753 163 ntBASIC0.47□□□□□ -2.33
Cd40lgP27548 Gm22522-201ENSMUST00000158271 151 ntBASIC0.47□□□□□ -2.33
Cd40lgP27548 Gm23977-201ENSMUST00000177871 74 ntBASIC0.47□□□□□ -2.33
Cd40lgP27548 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.47□□□□□ -2.33
Cd40lgP27548 Snord82-201ENSMUST00000082889 70 ntBASIC0.47□□□□□ -2.33
Cd40lgP27548 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.47□□□□□ -2.33
Cd40lgP27548 Mir466b-8-201ENSMUST00000103883 86 ntBASIC0.46□□□□□ -2.34
Cd40lgP27548 Gm23783-201ENSMUST00000157941 102 ntBASIC0.46□□□□□ -2.34
Cd40lgP27548 Gm25834-201ENSMUST00000158916 101 ntBASIC0.46□□□□□ -2.34
Cd40lgP27548 Gm23416-201ENSMUST00000175520 95 ntBASIC0.46□□□□□ -2.34
Cd40lgP27548 Gm27289-201ENSMUST00000183341 82 ntBASIC0.46□□□□□ -2.34
Cd40lgP27548 Gm27402-201ENSMUST00000183890 120 ntBASIC0.46□□□□□ -2.34
Cd40lgP27548 Mir466e-201ENSMUST00000198862 84 ntBASIC0.46□□□□□ -2.34
Cd40lgP27548 Mir466c-1-201ENSMUST00000200654 84 ntBASIC0.46□□□□□ -2.34
Cd40lgP27548 Gm44211-201ENSMUST00000204867 145 ntBASIC0.46□□□□□ -2.34
Cd40lgP27548 Gm25588-201ENSMUST00000082501 140 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 173.4 ms