Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm23548-201ENSMUST00000158963 106 ntBASIC2.54□□□□□ -2
Pde6bP23440 Gm24656-201ENSMUST00000177548 132 ntBASIC2.54□□□□□ -2
Pde6bP23440 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.54□□□□□ -2
Pde6bP23440 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC2.54□□□□□ -2
Pde6bP23440 Gm25796-201ENSMUST00000082645 163 ntBASIC2.54□□□□□ -2
Pde6bP23440 Mir93-201ENSMUST00000083593 88 ntBASIC2.54□□□□□ -2
Pde6bP23440 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2.53□□□□□ -2
Pde6bP23440 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Pde6bP23440 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.53□□□□□ -2
Pde6bP23440 Gm23223-201ENSMUST00000158119 127 ntBASIC2.53□□□□□ -2
Pde6bP23440 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.53□□□□□ -2
Pde6bP23440 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC2.53□□□□□ -2
Pde6bP23440 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.53□□□□□ -2
Pde6bP23440 Mir429-201ENSMUST00000083493 83 ntBASIC2.53□□□□□ -2
Pde6bP23440 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Pde6bP23440 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Pde6bP23440 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Pde6bP23440 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.52□□□□□ -2.01
Pde6bP23440 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Pde6bP23440 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Pde6bP23440 Mir466l-201ENSMUST00000104866 121 ntBASIC2.52□□□□□ -2.01
Pde6bP23440 Gm13433-201ENSMUST00000121701 240 ntBASIC2.52□□□□□ -2.01
Pde6bP23440 Gm23986-201ENSMUST00000157144 63 ntBASIC2.52□□□□□ -2.01
Pde6bP23440 Gm26090-201ENSMUST00000157897 128 ntBASIC2.52□□□□□ -2.01
Pde6bP23440 Gm24333-201ENSMUST00000175101 84 ntBASIC2.52□□□□□ -2.01
Pde6bP23440 Gm42795-201ENSMUST00000198847 76 ntBASIC2.52□□□□□ -2.01
Pde6bP23440 Gm14882-201ENSMUST00000117216 218 ntBASIC2.51□□□□□ -2.01
Pde6bP23440 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.51□□□□□ -2.01
Pde6bP23440 Gm8031-201ENSMUST00000213430 626 ntBASIC2.51□□□□□ -2.01
Pde6bP23440 Gm6109-201ENSMUST00000223297 348 ntBASIC2.51□□□□□ -2.01
Pde6bP23440 Gm24044-201ENSMUST00000083107 156 ntBASIC2.51□□□□□ -2.01
Pde6bP23440 Gm44240-201ENSMUST00000204015 2654 ntBASIC2.51□□□□□ -2.01
Pde6bP23440 Gm24049-201ENSMUST00000102409 100 ntBASIC2.5□□□□□ -2.01
Pde6bP23440 Mir880-201ENSMUST00000104809 78 ntBASIC2.5□□□□□ -2.01
Pde6bP23440 Gm25112-201ENSMUST00000122680 104 ntBASIC2.5□□□□□ -2.01
Pde6bP23440 Gm23351-201ENSMUST00000158427 125 ntBASIC2.5□□□□□ -2.01
Pde6bP23440 Mir497-201ENSMUST00000200557 84 ntBASIC2.5□□□□□ -2.01
Pde6bP23440 Mir451a-201ENSMUST00000093557 72 ntBASIC2.5□□□□□ -2.01
Pde6bP23440 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Pde6bP23440 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Pde6bP23440 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.49□□□□□ -2.01
Pde6bP23440 Gm25094-201ENSMUST00000103992 131 ntBASIC2.49□□□□□ -2.01
Pde6bP23440 Gm12941-201ENSMUST00000117934 220 ntBASIC2.49□□□□□ -2.01
Pde6bP23440 Gm11856-201ENSMUST00000118712 276 ntBASIC2.49□□□□□ -2.01
Pde6bP23440 Gm22706-201ENSMUST00000157907 112 ntBASIC2.49□□□□□ -2.01
Pde6bP23440 Gm23261-201ENSMUST00000158316 136 ntBASIC2.49□□□□□ -2.01
Pde6bP23440 Gm25976-201ENSMUST00000158695 130 ntBASIC2.49□□□□□ -2.01
Pde6bP23440 Mir6388-201ENSMUST00000184417 75 ntBASIC2.49□□□□□ -2.01
Pde6bP23440 Mir7226-201ENSMUST00000184953 60 ntBASIC2.49□□□□□ -2.01
Pde6bP23440 Mir322-201ENSMUST00000083484 95 ntBASIC2.49□□□□□ -2.01
Pde6bP23440 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Pde6bP23440 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Pde6bP23440 Gm26077-201ENSMUST00000104064 123 ntBASIC2.48□□□□□ -2.01
Pde6bP23440 Gm24851-201ENSMUST00000158028 103 ntBASIC2.48□□□□□ -2.01
Pde6bP23440 Mir21c-201ENSMUST00000184910 78 ntBASIC2.48□□□□□ -2.01
Pde6bP23440 AC140930.2-201ENSMUST00000221803 109 ntBASIC2.48□□□□□ -2.01
Pde6bP23440 Gm26109-201ENSMUST00000083970 70 ntBASIC2.48□□□□□ -2.01
Pde6bP23440 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Pde6bP23440 Gm26425-201ENSMUST00000122529 82 ntBASIC2.47□□□□□ -2.01
Pde6bP23440 Gm23838-201ENSMUST00000158067 162 ntBASIC2.47□□□□□ -2.01
Pde6bP23440 AC132833.2-201ENSMUST00000228699 157 ntBASIC2.47□□□□□ -2.01
Pde6bP23440 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.46□□□□□ -2.02
Pde6bP23440 Gm23951-201ENSMUST00000104029 132 ntBASIC2.46□□□□□ -2.02
Pde6bP23440 Gm23369-201ENSMUST00000175406 105 ntBASIC2.46□□□□□ -2.02
Pde6bP23440 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Pde6bP23440 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.46□□□□□ -2.02
Pde6bP23440 Gm44807-201ENSMUST00000206115 154 ntBASIC2.46□□□□□ -2.02
Pde6bP23440 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Pde6bP23440 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Pde6bP23440 Gm45265-201ENSMUST00000210852 2497 ntBASIC2.45□□□□□ -2.02
Pde6bP23440 Gm24937-201ENSMUST00000122597 134 ntBASIC2.45□□□□□ -2.02
Pde6bP23440 Gm25382-201ENSMUST00000157811 97 ntBASIC2.45□□□□□ -2.02
Pde6bP23440 Gm23996-201ENSMUST00000158062 131 ntBASIC2.45□□□□□ -2.02
Pde6bP23440 Gm22089-201ENSMUST00000158336 102 ntBASIC2.45□□□□□ -2.02
Pde6bP23440 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC2.45□□□□□ -2.02
Pde6bP23440 Mir6997-201ENSMUST00000184313 71 ntBASIC2.45□□□□□ -2.02
Pde6bP23440 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.45□□□□□ -2.02
Pde6bP23440 Mir7232-201ENSMUST00000197929 74 ntBASIC2.45□□□□□ -2.02
Pde6bP23440 Snord80-201ENSMUST00000083801 81 ntBASIC2.45□□□□□ -2.02
Pde6bP23440 Gm25610-201ENSMUST00000104016 129 ntBASIC2.44□□□□□ -2.02
Pde6bP23440 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.44□□□□□ -2.02
Pde6bP23440 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.44□□□□□ -2.02
Pde6bP23440 Gm24946-201ENSMUST00000158332 106 ntBASIC2.44□□□□□ -2.02
Pde6bP23440 Gm22947-201ENSMUST00000158559 91 ntBASIC2.44□□□□□ -2.02
Pde6bP23440 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.44□□□□□ -2.02
Pde6bP23440 Mir5619-201ENSMUST00000176065 61 ntBASIC2.44□□□□□ -2.02
Pde6bP23440 Mir222-201ENSMUST00000083537 79 ntBASIC2.44□□□□□ -2.02
Pde6bP23440 Mir423-201ENSMUST00000083584 109 ntBASIC2.44□□□□□ -2.02
Pde6bP23440 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Pde6bP23440 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Pde6bP23440 Gm25611-201ENSMUST00000104017 133 ntBASIC2.43□□□□□ -2.02
Pde6bP23440 Gm22672-201ENSMUST00000104414 134 ntBASIC2.43□□□□□ -2.02
Pde6bP23440 Gm22099-201ENSMUST00000157925 123 ntBASIC2.43□□□□□ -2.02
Pde6bP23440 Gm25996-201ENSMUST00000175393 117 ntBASIC2.43□□□□□ -2.02
Pde6bP23440 Gm45471-201ENSMUST00000211270 281 ntBASIC2.43□□□□□ -2.02
Pde6bP23440 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.43□□□□□ -2.02
Pde6bP23440 Gm25402-201ENSMUST00000082966 131 ntBASIC2.43□□□□□ -2.02
Pde6bP23440 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.43□□□□□ -2.02
Pde6bP23440 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
Pde6bP23440 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 153 ms