Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm25673-201ENSMUST00000179957 127 ntBASIC0.2□□□□□ -2.38
Lire1P11260 Mir7010-201ENSMUST00000183464 63 ntBASIC0.2□□□□□ -2.38
Lire1P11260 Gm27845-201ENSMUST00000184479 114 ntBASIC0.2□□□□□ -2.38
Lire1P11260 Mir466f-3-201ENSMUST00000104788 94 ntBASIC0.19□□□□□ -2.38
Lire1P11260 Gm22999-201ENSMUST00000157082 88 ntBASIC0.19□□□□□ -2.38
Lire1P11260 Gm24006-201ENSMUST00000158462 132 ntBASIC0.19□□□□□ -2.38
Lire1P11260 Gm28925-201ENSMUST00000188586 168 ntBASIC0.19□□□□□ -2.38
Lire1P11260 Gm29107-201ENSMUST00000190910 347 ntBASIC0.19□□□□□ -2.38
Lire1P11260 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.19□□□□□ -2.38
Lire1P11260 Gm25111-201ENSMUST00000116686 147 ntBASIC0.18□□□□□ -2.38
Lire1P11260 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.18□□□□□ -2.38
Lire1P11260 Gm24500-201ENSMUST00000158447 124 ntBASIC0.18□□□□□ -2.38
Lire1P11260 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.18□□□□□ -2.38
Lire1P11260 Gm25935-201ENSMUST00000178746 107 ntBASIC0.18□□□□□ -2.38
Lire1P11260 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC0.18□□□□□ -2.38
Lire1P11260 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC0.18□□□□□ -2.38
Lire1P11260 Gm26076-201ENSMUST00000104065 105 ntBASIC0.17□□□□□ -2.38
Lire1P11260 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.17□□□□□ -2.38
Lire1P11260 Gm22479-201ENSMUST00000122566 81 ntBASIC0.17□□□□□ -2.38
Lire1P11260 Gm22239-201ENSMUST00000175220 103 ntBASIC0.17□□□□□ -2.38
Lire1P11260 Mir3108-201ENSMUST00000175500 79 ntBASIC0.17□□□□□ -2.38
Lire1P11260 Gm27717-201ENSMUST00000183933 151 ntBASIC0.17□□□□□ -2.38
Lire1P11260 Gm27747-201ENSMUST00000184707 85 ntBASIC0.17□□□□□ -2.38
Lire1P11260 Mir532-201ENSMUST00000093630 96 ntBASIC0.17□□□□□ -2.38
Lire1P11260 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.17□□□□□ -2.38
Lire1P11260 Gm25611-201ENSMUST00000104017 133 ntBASIC0.16□□□□□ -2.38
Lire1P11260 Gm23466-201ENSMUST00000157133 106 ntBASIC0.16□□□□□ -2.38
Lire1P11260 Gm22216-201ENSMUST00000157557 114 ntBASIC0.16□□□□□ -2.38
Lire1P11260 Gm27672-201ENSMUST00000183751 204 ntBASIC0.16□□□□□ -2.38
Lire1P11260 Gm37715-201ENSMUST00000193206 235 ntBASIC0.16□□□□□ -2.38
Lire1P11260 Gm23749-201ENSMUST00000104223 131 ntBASIC0.15□□□□□ -2.39
Lire1P11260 Gm16186-201ENSMUST00000120132 216 ntBASIC0.15□□□□□ -2.39
Lire1P11260 Gm13345-201ENSMUST00000121928 228 ntBASIC0.15□□□□□ -2.39
Lire1P11260 Gm22815-201ENSMUST00000157451 62 ntBASIC0.15□□□□□ -2.39
Lire1P11260 Gm25885-201ENSMUST00000157779 109 ntBASIC0.15□□□□□ -2.39
Lire1P11260 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.15□□□□□ -2.39
Lire1P11260 Gm25952-201ENSMUST00000175329 74 ntBASIC0.15□□□□□ -2.39
Lire1P11260 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.15□□□□□ -2.39
Lire1P11260 Gm24764-201ENSMUST00000083686 199 ntBASIC0.15□□□□□ -2.39
Lire1P11260 Gm11322-201ENSMUST00000118095 435 ntBASIC0.14□□□□□ -2.39
Lire1P11260 Gm23214-201ENSMUST00000122716 157 ntBASIC0.14□□□□□ -2.39
Lire1P11260 Gm44457-201ENSMUST00000198109 76 ntBASIC0.14□□□□□ -2.39
Lire1P11260 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.14□□□□□ -2.39
Lire1P11260 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.14□□□□□ -2.39
Lire1P11260 Gm22753-201ENSMUST00000083657 107 ntBASIC0.14□□□□□ -2.39
Lire1P11260 Gm26293-201ENSMUST00000104170 84 ntBASIC0.13□□□□□ -2.39
Lire1P11260 Gm24793-201ENSMUST00000104289 132 ntBASIC0.13□□□□□ -2.39
Lire1P11260 Gm25848-201ENSMUST00000116790 144 ntBASIC0.13□□□□□ -2.39
Lire1P11260 Gm6952-201ENSMUST00000118629 159 ntBASIC0.13□□□□□ -2.39
Lire1P11260 Gm23761-201ENSMUST00000158347 104 ntBASIC0.13□□□□□ -2.39
Lire1P11260 Gm25267-201ENSMUST00000158522 63 ntBASIC0.13□□□□□ -2.39
Lire1P11260 Gm24415-201ENSMUST00000180218 107 ntBASIC0.13□□□□□ -2.39
Lire1P11260 Gm27402-201ENSMUST00000183890 120 ntBASIC0.13□□□□□ -2.39
Lire1P11260 Mir6390-201ENSMUST00000184405 129 ntBASIC0.13□□□□□ -2.39
Lire1P11260 Mir181a-2-201ENSMUST00000083489 76 ntBASIC0.13□□□□□ -2.39
Lire1P11260 Mir141-201ENSMUST00000083540 72 ntBASIC0.13□□□□□ -2.39
Lire1P11260 Gm25512-201ENSMUST00000083863 107 ntBASIC0.13□□□□□ -2.39
Lire1P11260 Mir875-201ENSMUST00000104698 78 ntBASIC0.12□□□□□ -2.39
Lire1P11260 Gm14792-201ENSMUST00000119725 258 ntBASIC0.12□□□□□ -2.39
Lire1P11260 Gm25771-201ENSMUST00000158565 144 ntBASIC0.12□□□□□ -2.39
Lire1P11260 Gm25444-201ENSMUST00000158999 113 ntBASIC0.12□□□□□ -2.39
Lire1P11260 Mir3089-201ENSMUST00000175350 84 ntBASIC0.12□□□□□ -2.39
Lire1P11260 Gm37330-201ENSMUST00000192606 153 ntBASIC0.12□□□□□ -2.39
Lire1P11260 Gm19790-201ENSMUST00000214414 251 ntBASIC0.12□□□□□ -2.39
Lire1P11260 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.12□□□□□ -2.39
Lire1P11260 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
Lire1P11260 Gm24867-201ENSMUST00000104161 107 ntBASIC0.11□□□□□ -2.39
Lire1P11260 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.11□□□□□ -2.39
Lire1P11260 Gm23036-201ENSMUST00000157885 99 ntBASIC0.11□□□□□ -2.39
Lire1P11260 Gm22434-201ENSMUST00000158549 122 ntBASIC0.11□□□□□ -2.39
Lire1P11260 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
Lire1P11260 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.11□□□□□ -2.39
Lire1P11260 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.11□□□□□ -2.39
Lire1P11260 Gm24929-201ENSMUST00000083403 139 ntBASIC0.11□□□□□ -2.39
Lire1P11260 Gm23345-201ENSMUST00000083817 150 ntBASIC0.11□□□□□ -2.39
Lire1P11260 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.11□□□□□ -2.39
Lire1P11260 Gm22520-201ENSMUST00000158269 129 ntBASIC0.1□□□□□ -2.39
Lire1P11260 Gm23581-201ENSMUST00000158531 63 ntBASIC0.1□□□□□ -2.39
Lire1P11260 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.1□□□□□ -2.39
Lire1P11260 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
Lire1P11260 Gm14567-201ENSMUST00000117155 174 ntBASIC0.09□□□□□ -2.4
Lire1P11260 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.09□□□□□ -2.4
Lire1P11260 Gm27993-201ENSMUST00000184362 85 ntBASIC0.09□□□□□ -2.4
Lire1P11260 Gm6003-201ENSMUST00000187903 463 ntBASIC0.09□□□□□ -2.4
Lire1P11260 Gm28767-201ENSMUST00000188601 114 ntBASIC0.09□□□□□ -2.4
Lire1P11260 Gm38364-201ENSMUST00000191814 179 ntBASIC0.09□□□□□ -2.4
Lire1P11260 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
Lire1P11260 Gm23301-201ENSMUST00000082713 65 ntBASIC0.09□□□□□ -2.4
Lire1P11260 Snord82-201ENSMUST00000082889 70 ntBASIC0.09□□□□□ -2.4
Lire1P11260 Mir100-201ENSMUST00000175270 80 ntBASIC0.08□□□□□ -2.4
Lire1P11260 Mir6336-201ENSMUST00000183581 130 ntBASIC0.08□□□□□ -2.4
Lire1P11260 Mir7229-201ENSMUST00000197062 53 ntBASIC0.08□□□□□ -2.4
Lire1P11260 mt-Tr-201ENSMUST00000082412 68 ntBASIC0.08□□□□□ -2.4
Lire1P11260 Gm22358-201ENSMUST00000082877 122 ntBASIC0.08□□□□□ -2.4
Lire1P11260 Gm25188-201ENSMUST00000083913 122 ntBASIC0.08□□□□□ -2.4
Lire1P11260 Snord100-201ENSMUST00000116836 74 ntBASIC0.07□□□□□ -2.4
Lire1P11260 Gm11388-201ENSMUST00000120908 159 ntBASIC0.07□□□□□ -2.4
Lire1P11260 Mir6951-201ENSMUST00000183910 75 ntBASIC0.07□□□□□ -2.4
Lire1P11260 Gm27943-201ENSMUST00000184844 116 ntBASIC0.07□□□□□ -2.4
Lire1P11260 Gm44373-201ENSMUST00000196112 169 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms