Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm23813-201ENSMUST00000175153 77 ntBASIC2.12□□□□□ -2.07
Vti1aO89116 AC126939.3-201ENSMUST00000226061 166 ntBASIC2.12□□□□□ -2.07
Vti1aO89116 Gm25636-201ENSMUST00000082666 133 ntBASIC2.12□□□□□ -2.07
Vti1aO89116 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Vti1aO89116 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Vti1aO89116 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Vti1aO89116 Gm25035-201ENSMUST00000175414 77 ntBASIC2.11□□□□□ -2.07
Vti1aO89116 Gm22070-201ENSMUST00000178475 107 ntBASIC2.11□□□□□ -2.07
Vti1aO89116 Gm27517-201ENSMUST00000184347 236 ntBASIC2.11□□□□□ -2.07
Vti1aO89116 Gm27443-201ENSMUST00000184660 98 ntBASIC2.11□□□□□ -2.07
Vti1aO89116 Gm45268-201ENSMUST00000210046 370 ntBASIC2.11□□□□□ -2.07
Vti1aO89116 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.11□□□□□ -2.07
Vti1aO89116 Gm23095-201ENSMUST00000083446 107 ntBASIC2.11□□□□□ -2.07
Vti1aO89116 Gm24234-201ENSMUST00000104316 107 ntBASIC2.1□□□□□ -2.07
Vti1aO89116 Gm12086-201ENSMUST00000120863 228 ntBASIC2.1□□□□□ -2.07
Vti1aO89116 Gm24894-201ENSMUST00000122744 118 ntBASIC2.1□□□□□ -2.07
Vti1aO89116 Gm22999-201ENSMUST00000157082 88 ntBASIC2.1□□□□□ -2.07
Vti1aO89116 Mir5104-201ENSMUST00000175319 94 ntBASIC2.1□□□□□ -2.07
Vti1aO89116 Gm42795-201ENSMUST00000198847 76 ntBASIC2.1□□□□□ -2.07
Vti1aO89116 Gm22509-201ENSMUST00000082775 107 ntBASIC2.1□□□□□ -2.07
Vti1aO89116 Mir466-201ENSMUST00000093591 73 ntBASIC2.1□□□□□ -2.07
Vti1aO89116 Mir3096-201ENSMUST00000116685 71 ntBASIC2.09□□□□□ -2.07
Vti1aO89116 Gm22451-201ENSMUST00000122803 151 ntBASIC2.09□□□□□ -2.07
Vti1aO89116 Gm16328-201ENSMUST00000126985 196 ntBASIC2.09□□□□□ -2.07
Vti1aO89116 Gm25949-201ENSMUST00000175333 114 ntBASIC2.09□□□□□ -2.07
Vti1aO89116 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC2.09□□□□□ -2.07
Vti1aO89116 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.09□□□□□ -2.07
Vti1aO89116 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Vti1aO89116 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Vti1aO89116 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Vti1aO89116 Mir654-201ENSMUST00000104787 84 ntBASIC2.08□□□□□ -2.08
Vti1aO89116 Gm25646-201ENSMUST00000178527 79 ntBASIC2.08□□□□□ -2.08
Vti1aO89116 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Vti1aO89116 Gm22494-201ENSMUST00000104495 128 ntBASIC2.07□□□□□ -2.08
Vti1aO89116 Gm24880-201ENSMUST00000158776 85 ntBASIC2.07□□□□□ -2.08
Vti1aO89116 Mir6379-201ENSMUST00000183392 115 ntBASIC2.07□□□□□ -2.08
Vti1aO89116 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.07□□□□□ -2.08
Vti1aO89116 AC136457.1-201ENSMUST00000224195 156 ntBASIC2.07□□□□□ -2.08
Vti1aO89116 Gm26922-201ENSMUST00000082687 72 ntBASIC2.07□□□□□ -2.08
Vti1aO89116 Gm12013-201ENSMUST00000121971 155 ntBASIC2.06□□□□□ -2.08
Vti1aO89116 Gm16539-201ENSMUST00000160086 327 ntBASIC2.06□□□□□ -2.08
Vti1aO89116 Mir6352-201ENSMUST00000184495 116 ntBASIC2.06□□□□□ -2.08
Vti1aO89116 Gm37330-201ENSMUST00000192606 153 ntBASIC2.06□□□□□ -2.08
Vti1aO89116 Gm25684-201ENSMUST00000083941 107 ntBASIC2.06□□□□□ -2.08
Vti1aO89116 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Vti1aO89116 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.06□□□□□ -2.08
Vti1aO89116 Gm22196-201ENSMUST00000116865 109 ntBASIC2.05□□□□□ -2.08
Vti1aO89116 Gm14674-201ENSMUST00000117816 342 ntBASIC2.05□□□□□ -2.08
Vti1aO89116 Gm25889-201ENSMUST00000157775 107 ntBASIC2.05□□□□□ -2.08
Vti1aO89116 Gm24238-201ENSMUST00000157792 98 ntBASIC2.05□□□□□ -2.08
Vti1aO89116 Gm22556-201ENSMUST00000157803 100 ntBASIC2.05□□□□□ -2.08
Vti1aO89116 Gm23083-201ENSMUST00000157851 116 ntBASIC2.05□□□□□ -2.08
Vti1aO89116 Gm22403-201ENSMUST00000174919 84 ntBASIC2.05□□□□□ -2.08
Vti1aO89116 Mir6377-201ENSMUST00000183760 114 ntBASIC2.05□□□□□ -2.08
Vti1aO89116 Gm27898-201ENSMUST00000183987 80 ntBASIC2.05□□□□□ -2.08
Vti1aO89116 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.05□□□□□ -2.08
Vti1aO89116 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC2.05□□□□□ -2.08
Vti1aO89116 mt-Tf-201ENSMUST00000082387 68 ntBASIC2.05□□□□□ -2.08
Vti1aO89116 Mir369-201ENSMUST00000083627 79 ntBASIC2.05□□□□□ -2.08
Vti1aO89116 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Vti1aO89116 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Vti1aO89116 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.04□□□□□ -2.08
Vti1aO89116 Mir301b-201ENSMUST00000102333 97 ntBASIC2.04□□□□□ -2.08
Vti1aO89116 Gm25044-201ENSMUST00000158603 104 ntBASIC2.04□□□□□ -2.08
Vti1aO89116 Mir6901-201ENSMUST00000185062 62 ntBASIC2.04□□□□□ -2.08
Vti1aO89116 AC069074.1-201ENSMUST00000220048 381 ntBASIC2.04□□□□□ -2.08
Vti1aO89116 AC126939.1-201ENSMUST00000224943 226 ntBASIC2.04□□□□□ -2.08
Vti1aO89116 Gm23299-201ENSMUST00000082708 79 ntBASIC2.04□□□□□ -2.08
Vti1aO89116 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Vti1aO89116 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Vti1aO89116 Gm25090-201ENSMUST00000104000 132 ntBASIC2.03□□□□□ -2.08
Vti1aO89116 Gm22425-201ENSMUST00000158532 138 ntBASIC2.03□□□□□ -2.08
Vti1aO89116 Mir3061-201ENSMUST00000175129 91 ntBASIC2.03□□□□□ -2.08
Vti1aO89116 Gm23375-201ENSMUST00000175407 83 ntBASIC2.03□□□□□ -2.08
Vti1aO89116 Gm24572-201ENSMUST00000175505 88 ntBASIC2.03□□□□□ -2.08
Vti1aO89116 Mir6950-201ENSMUST00000184438 73 ntBASIC2.03□□□□□ -2.08
Vti1aO89116 Gm26123-201ENSMUST00000083363 135 ntBASIC2.03□□□□□ -2.08
Vti1aO89116 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
Vti1aO89116 Gm25611-201ENSMUST00000104017 133 ntBASIC2.02□□□□□ -2.09
Vti1aO89116 Gm24913-201ENSMUST00000157286 107 ntBASIC2.02□□□□□ -2.09
Vti1aO89116 Gm25423-201ENSMUST00000157609 107 ntBASIC2.02□□□□□ -2.09
Vti1aO89116 Gm28256-201ENSMUST00000188953 139 ntBASIC2.02□□□□□ -2.09
Vti1aO89116 Gm28559-201ENSMUST00000190532 139 ntBASIC2.02□□□□□ -2.09
Vti1aO89116 mt-Ts2-201ENSMUST00000082416 59 ntBASIC2.02□□□□□ -2.09
Vti1aO89116 Gm22055-201ENSMUST00000083388 107 ntBASIC2.02□□□□□ -2.09
Vti1aO89116 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Vti1aO89116 Gm26081-201ENSMUST00000104068 132 ntBASIC2.01□□□□□ -2.09
Vti1aO89116 Mir873a-201ENSMUST00000104863 77 ntBASIC2.01□□□□□ -2.09
Vti1aO89116 Gm22213-201ENSMUST00000157564 119 ntBASIC2.01□□□□□ -2.09
Vti1aO89116 Gm24229-201ENSMUST00000158830 118 ntBASIC2.01□□□□□ -2.09
Vti1aO89116 Gm25444-201ENSMUST00000158999 113 ntBASIC2.01□□□□□ -2.09
Vti1aO89116 Gm25098-201ENSMUST00000177580 79 ntBASIC2.01□□□□□ -2.09
Vti1aO89116 Gm23356-201ENSMUST00000177610 79 ntBASIC2.01□□□□□ -2.09
Vti1aO89116 Gm24027-201ENSMUST00000177611 79 ntBASIC2.01□□□□□ -2.09
Vti1aO89116 Gm22511-201ENSMUST00000177628 79 ntBASIC2.01□□□□□ -2.09
Vti1aO89116 Gm22630-201ENSMUST00000177781 79 ntBASIC2.01□□□□□ -2.09
Vti1aO89116 Gm23560-201ENSMUST00000177782 79 ntBASIC2.01□□□□□ -2.09
Vti1aO89116 Gm25462-201ENSMUST00000177833 79 ntBASIC2.01□□□□□ -2.09
Vti1aO89116 Gm26059-201ENSMUST00000177865 79 ntBASIC2.01□□□□□ -2.09
Vti1aO89116 Gm22255-201ENSMUST00000177933 79 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 137 ms