Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm8508-201ENSMUST00000061226 363 ntBASIC1.32□□□□□ -2.2
Best1O88870 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
Best1O88870 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Best1O88870 Gm24131-201ENSMUST00000158539 107 ntBASIC1.31□□□□□ -2.2
Best1O88870 Gm23209-201ENSMUST00000158667 110 ntBASIC1.31□□□□□ -2.2
Best1O88870 Gm16307-201ENSMUST00000161269 210 ntBASIC1.31□□□□□ -2.2
Best1O88870 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Best1O88870 Gm42533-201ENSMUST00000196247 157 ntBASIC1.31□□□□□ -2.2
Best1O88870 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.31□□□□□ -2.2
Best1O88870 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Best1O88870 Mir547-201ENSMUST00000102051 78 ntBASIC1.3□□□□□ -2.2
Best1O88870 Gm23337-201ENSMUST00000158959 118 ntBASIC1.3□□□□□ -2.2
Best1O88870 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Best1O88870 Gm42623-201ENSMUST00000197225 379 ntBASIC1.3□□□□□ -2.2
Best1O88870 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.3□□□□□ -2.2
Best1O88870 Gm24311-201ENSMUST00000082570 104 ntBASIC1.3□□□□□ -2.2
Best1O88870 Gm23377-201ENSMUST00000082943 126 ntBASIC1.3□□□□□ -2.2
Best1O88870 Gm22576-201ENSMUST00000083733 104 ntBASIC1.3□□□□□ -2.2
Best1O88870 Snord72-201ENSMUST00000104549 81 ntBASIC1.29□□□□□ -2.2
Best1O88870 Gm23336-201ENSMUST00000117023 123 ntBASIC1.29□□□□□ -2.2
Best1O88870 Gm26274-201ENSMUST00000157103 321 ntBASIC1.29□□□□□ -2.2
Best1O88870 Gm16550-201ENSMUST00000162550 126 ntBASIC1.29□□□□□ -2.2
Best1O88870 Gm23967-201ENSMUST00000175062 78 ntBASIC1.29□□□□□ -2.2
Best1O88870 Gm26379-202ENSMUST00000200225 132 ntBASIC1.29□□□□□ -2.2
Best1O88870 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC1.29□□□□□ -2.2
Best1O88870 AL627387.1-201ENSMUST00000226063 250 ntBASIC1.29□□□□□ -2.2
Best1O88870 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1.29□□□□□ -2.2
Best1O88870 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Best1O88870 Mir3098-201ENSMUST00000175416 87 ntBASIC1.28□□□□□ -2.2
Best1O88870 Gm23267-201ENSMUST00000178490 132 ntBASIC1.28□□□□□ -2.2
Best1O88870 Gm22887-201ENSMUST00000178586 107 ntBASIC1.28□□□□□ -2.2
Best1O88870 Gm27326-201ENSMUST00000183504 95 ntBASIC1.28□□□□□ -2.2
Best1O88870 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Best1O88870 Mir411-201ENSMUST00000083543 82 ntBASIC1.28□□□□□ -2.2
Best1O88870 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Best1O88870 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Best1O88870 Gm24895-201ENSMUST00000122742 74 ntBASIC1.27□□□□□ -2.21
Best1O88870 Gm25820-201ENSMUST00000198589 127 ntBASIC1.27□□□□□ -2.21
Best1O88870 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
Best1O88870 Gm8219-201ENSMUST00000218309 242 ntBASIC1.27□□□□□ -2.21
Best1O88870 Snora41-201ENSMUST00000082668 132 ntBASIC1.27□□□□□ -2.21
Best1O88870 Snord61-201ENSMUST00000083176 71 ntBASIC1.27□□□□□ -2.21
Best1O88870 Gm23990-201ENSMUST00000117031 117 ntBASIC1.26□□□□□ -2.21
Best1O88870 Gm22079-201ENSMUST00000157592 106 ntBASIC1.26□□□□□ -2.21
Best1O88870 Gm26358-201ENSMUST00000158215 97 ntBASIC1.26□□□□□ -2.21
Best1O88870 Gm25716-201ENSMUST00000158628 104 ntBASIC1.26□□□□□ -2.21
Best1O88870 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
Best1O88870 Gm27928-201ENSMUST00000183747 256 ntBASIC1.26□□□□□ -2.21
Best1O88870 Gm44322-201ENSMUST00000196830 115 ntBASIC1.26□□□□□ -2.21
Best1O88870 Trav5-2-201ENSMUST00000199855 280 ntBASIC1.26□□□□□ -2.21
Best1O88870 Gm18213-201ENSMUST00000207850 178 ntBASIC1.26□□□□□ -2.21
Best1O88870 Gm24616-201ENSMUST00000083274 139 ntBASIC1.26□□□□□ -2.21
Best1O88870 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Best1O88870 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Best1O88870 Gm24106-201ENSMUST00000175498 127 ntBASIC1.25□□□□□ -2.21
Best1O88870 Mir7665-201ENSMUST00000184907 63 ntBASIC1.25□□□□□ -2.21
Best1O88870 Ighv15-1-201ENSMUST00000194450 276 ntBASIC1.25□□□□□ -2.21
Best1O88870 Mir3969-201ENSMUST00000197106 92 ntBASIC1.25□□□□□ -2.21
Best1O88870 Mir343-201ENSMUST00000102360 75 ntBASIC1.24□□□□□ -2.21
Best1O88870 Gm14502-201ENSMUST00000118154 113 ntBASIC1.24□□□□□ -2.21
Best1O88870 Gm24509-201ENSMUST00000157086 101 ntBASIC1.24□□□□□ -2.21
Best1O88870 Gm25358-201ENSMUST00000157189 101 ntBASIC1.24□□□□□ -2.21
Best1O88870 Mir7091-201ENSMUST00000184075 79 ntBASIC1.24□□□□□ -2.21
Best1O88870 Gm18665-201ENSMUST00000189783 270 ntBASIC1.24□□□□□ -2.21
Best1O88870 Gm43911-201ENSMUST00000203097 76 ntBASIC1.24□□□□□ -2.21
Best1O88870 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC1.24□□□□□ -2.21
Best1O88870 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC1.24□□□□□ -2.21
Best1O88870 Gm24252-201ENSMUST00000083700 132 ntBASIC1.24□□□□□ -2.21
Best1O88870 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.23□□□□□ -2.21
Best1O88870 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Best1O88870 Gm23320-201ENSMUST00000104462 127 ntBASIC1.23□□□□□ -2.21
Best1O88870 Gm23859-201ENSMUST00000158383 64 ntBASIC1.23□□□□□ -2.21
Best1O88870 Gm44338-201ENSMUST00000198614 110 ntBASIC1.23□□□□□ -2.21
Best1O88870 Mir6962-201ENSMUST00000199512 63 ntBASIC1.23□□□□□ -2.21
Best1O88870 Gm24527-201ENSMUST00000082920 107 ntBASIC1.23□□□□□ -2.21
Best1O88870 Gm25610-201ENSMUST00000104016 129 ntBASIC1.22□□□□□ -2.21
Best1O88870 Gm26029-201ENSMUST00000158659 132 ntBASIC1.22□□□□□ -2.21
Best1O88870 Mir6377-201ENSMUST00000183760 114 ntBASIC1.22□□□□□ -2.21
Best1O88870 Gm37545-201ENSMUST00000186512 148 ntBASIC1.22□□□□□ -2.21
Best1O88870 Mir101a-201ENSMUST00000083517 83 ntBASIC1.22□□□□□ -2.21
Best1O88870 Gm22780-201ENSMUST00000104084 132 ntBASIC1.21□□□□□ -2.22
Best1O88870 Gm23083-201ENSMUST00000157851 116 ntBASIC1.21□□□□□ -2.22
Best1O88870 Gm22139-201ENSMUST00000158747 105 ntBASIC1.21□□□□□ -2.22
Best1O88870 Gm22801-201ENSMUST00000175624 84 ntBASIC1.21□□□□□ -2.22
Best1O88870 Gm27446-201ENSMUST00000183963 89 ntBASIC1.21□□□□□ -2.22
Best1O88870 Mir7063-201ENSMUST00000184158 91 ntBASIC1.21□□□□□ -2.22
Best1O88870 Mir21b-201ENSMUST00000184317 108 ntBASIC1.21□□□□□ -2.22
Best1O88870 Mir6928-201ENSMUST00000185166 70 ntBASIC1.21□□□□□ -2.22
Best1O88870 Gm20118-201ENSMUST00000187207 162 ntBASIC1.21□□□□□ -2.22
Best1O88870 Gm38323-201ENSMUST00000192450 210 ntBASIC1.21□□□□□ -2.22
Best1O88870 Gm43898-201ENSMUST00000204456 424 ntBASIC1.21□□□□□ -2.22
Best1O88870 Mir33-201ENSMUST00000083531 69 ntBASIC1.21□□□□□ -2.22
Best1O88870 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Best1O88870 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Best1O88870 Gm25980-201ENSMUST00000157176 218 ntBASIC1.2□□□□□ -2.22
Best1O88870 Snord35a-201ENSMUST00000083884 90 ntBASIC1.2□□□□□ -2.22
Best1O88870 Gm22105-201ENSMUST00000116734 116 ntBASIC1.19□□□□□ -2.22
Best1O88870 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.19□□□□□ -2.22
Best1O88870 Gm22332-201ENSMUST00000158072 126 ntBASIC1.19□□□□□ -2.22
Best1O88870 Gm24547-201ENSMUST00000158649 149 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 142.1 ms