Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Gm25716-201ENSMUST00000158628 104 ntBASIC1.23□□□□□ -2.21
ShdO88834 Gm23770-201ENSMUST00000178009 108 ntBASIC1.23□□□□□ -2.21
ShdO88834 Gm22832-201ENSMUST00000178022 108 ntBASIC1.23□□□□□ -2.21
ShdO88834 Gm23863-201ENSMUST00000178265 108 ntBASIC1.23□□□□□ -2.21
ShdO88834 Gm24828-201ENSMUST00000178507 108 ntBASIC1.23□□□□□ -2.21
ShdO88834 Gm23052-201ENSMUST00000178633 108 ntBASIC1.23□□□□□ -2.21
ShdO88834 Gm25729-201ENSMUST00000179050 108 ntBASIC1.23□□□□□ -2.21
ShdO88834 Gm25359-201ENSMUST00000179315 108 ntBASIC1.23□□□□□ -2.21
ShdO88834 Gm22624-201ENSMUST00000179913 108 ntBASIC1.23□□□□□ -2.21
ShdO88834 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
ShdO88834 Mir6962-201ENSMUST00000199512 63 ntBASIC1.23□□□□□ -2.21
ShdO88834 Gm44396-201ENSMUST00000199843 114 ntBASIC1.23□□□□□ -2.21
ShdO88834 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.23□□□□□ -2.21
ShdO88834 Gm22809-201ENSMUST00000082743 156 ntBASIC1.23□□□□□ -2.21
ShdO88834 Gm22576-201ENSMUST00000083733 104 ntBASIC1.23□□□□□ -2.21
ShdO88834 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.23□□□□□ -2.21
ShdO88834 Gm23083-201ENSMUST00000157851 116 ntBASIC1.22□□□□□ -2.21
ShdO88834 Gm22485-201ENSMUST00000157990 109 ntBASIC1.22□□□□□ -2.21
ShdO88834 Mir1961-201ENSMUST00000158643 112 ntBASIC1.22□□□□□ -2.21
ShdO88834 Gm23337-201ENSMUST00000158959 118 ntBASIC1.22□□□□□ -2.21
ShdO88834 Gm27928-201ENSMUST00000183747 256 ntBASIC1.22□□□□□ -2.21
ShdO88834 AL627387.1-201ENSMUST00000226063 250 ntBASIC1.22□□□□□ -2.21
ShdO88834 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.22□□□□□ -2.21
ShdO88834 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
ShdO88834 Mir709-201ENSMUST00000102190 88 ntBASIC1.21□□□□□ -2.22
ShdO88834 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
ShdO88834 Gm22515-201ENSMUST00000158273 305 ntBASIC1.21□□□□□ -2.22
ShdO88834 Gm24221-201ENSMUST00000158833 313 ntBASIC1.21□□□□□ -2.22
ShdO88834 Gm24106-201ENSMUST00000175498 127 ntBASIC1.21□□□□□ -2.22
ShdO88834 Mir21b-201ENSMUST00000184317 108 ntBASIC1.21□□□□□ -2.22
ShdO88834 Gm8508-201ENSMUST00000061226 363 ntBASIC1.21□□□□□ -2.22
ShdO88834 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
ShdO88834 Gm22780-201ENSMUST00000104084 132 ntBASIC1.2□□□□□ -2.22
ShdO88834 Gm24238-201ENSMUST00000157792 98 ntBASIC1.2□□□□□ -2.22
ShdO88834 Gm22425-201ENSMUST00000158532 138 ntBASIC1.2□□□□□ -2.22
ShdO88834 Ighv15-1-201ENSMUST00000194450 276 ntBASIC1.2□□□□□ -2.22
ShdO88834 Gm44338-201ENSMUST00000198614 110 ntBASIC1.2□□□□□ -2.22
ShdO88834 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC1.2□□□□□ -2.22
ShdO88834 Snord61-201ENSMUST00000083176 71 ntBASIC1.2□□□□□ -2.22
ShdO88834 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
ShdO88834 Gm23988-201ENSMUST00000117034 122 ntBASIC1.19□□□□□ -2.22
ShdO88834 Gm25166-201ENSMUST00000158909 111 ntBASIC1.19□□□□□ -2.22
ShdO88834 Mir468-201ENSMUST00000197332 78 ntBASIC1.19□□□□□ -2.22
ShdO88834 Trav5-2-201ENSMUST00000199855 280 ntBASIC1.19□□□□□ -2.22
ShdO88834 Gm43911-201ENSMUST00000203097 76 ntBASIC1.19□□□□□ -2.22
ShdO88834 Gm8219-201ENSMUST00000218309 242 ntBASIC1.19□□□□□ -2.22
ShdO88834 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
ShdO88834 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
ShdO88834 Gm22074-201ENSMUST00000158595 113 ntBASIC1.18□□□□□ -2.22
ShdO88834 Gm26029-201ENSMUST00000158659 132 ntBASIC1.18□□□□□ -2.22
ShdO88834 Gm23636-201ENSMUST00000175070 95 ntBASIC1.18□□□□□ -2.22
ShdO88834 Gm44462-201ENSMUST00000199696 129 ntBASIC1.18□□□□□ -2.22
ShdO88834 Gm22980-201ENSMUST00000082608 70 ntBASIC1.18□□□□□ -2.22
ShdO88834 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.17□□□□□ -2.22
ShdO88834 Mir547-201ENSMUST00000102051 78 ntBASIC1.17□□□□□ -2.22
ShdO88834 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
ShdO88834 Gm16307-201ENSMUST00000161269 210 ntBASIC1.17□□□□□ -2.22
ShdO88834 Gm18665-201ENSMUST00000189783 270 ntBASIC1.17□□□□□ -2.22
ShdO88834 Mir3969-201ENSMUST00000197106 92 ntBASIC1.17□□□□□ -2.22
ShdO88834 Gm44948-201ENSMUST00000209050 149 ntBASIC1.17□□□□□ -2.22
ShdO88834 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC1.17□□□□□ -2.22
ShdO88834 Mir411-201ENSMUST00000083543 82 ntBASIC1.17□□□□□ -2.22
ShdO88834 Gm23130-201ENSMUST00000104252 74 ntBASIC1.16□□□□□ -2.22
ShdO88834 Gm22079-201ENSMUST00000157592 106 ntBASIC1.16□□□□□ -2.22
ShdO88834 Gm26089-201ENSMUST00000157898 107 ntBASIC1.16□□□□□ -2.22
ShdO88834 Gm22139-201ENSMUST00000158747 105 ntBASIC1.16□□□□□ -2.22
ShdO88834 Gm27699-201ENSMUST00000183553 180 ntBASIC1.16□□□□□ -2.22
ShdO88834 Gm24311-201ENSMUST00000082570 104 ntBASIC1.16□□□□□ -2.22
ShdO88834 Gm22105-201ENSMUST00000116734 116 ntBASIC1.15□□□□□ -2.23
ShdO88834 Gm14502-201ENSMUST00000118154 113 ntBASIC1.15□□□□□ -2.23
ShdO88834 Gm26274-201ENSMUST00000157103 321 ntBASIC1.15□□□□□ -2.23
ShdO88834 Gm16550-201ENSMUST00000162550 126 ntBASIC1.15□□□□□ -2.23
ShdO88834 Gm42533-201ENSMUST00000196247 157 ntBASIC1.15□□□□□ -2.23
ShdO88834 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC1.15□□□□□ -2.23
ShdO88834 Gm24252-201ENSMUST00000083700 132 ntBASIC1.15□□□□□ -2.23
ShdO88834 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
ShdO88834 Gm23320-201ENSMUST00000104462 127 ntBASIC1.14□□□□□ -2.23
ShdO88834 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
ShdO88834 Gm23859-201ENSMUST00000158383 64 ntBASIC1.14□□□□□ -2.23
ShdO88834 Gm24154-201ENSMUST00000175261 130 ntBASIC1.14□□□□□ -2.23
ShdO88834 Gm27419-201ENSMUST00000184576 109 ntBASIC1.14□□□□□ -2.23
ShdO88834 Snora41-201ENSMUST00000082668 132 ntBASIC1.14□□□□□ -2.23
ShdO88834 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1.14□□□□□ -2.23
ShdO88834 Gm24509-201ENSMUST00000157086 101 ntBASIC1.13□□□□□ -2.23
ShdO88834 Gm25980-201ENSMUST00000157176 218 ntBASIC1.13□□□□□ -2.23
ShdO88834 Gm25358-201ENSMUST00000157189 101 ntBASIC1.13□□□□□ -2.23
ShdO88834 Gm26363-201ENSMUST00000158866 83 ntBASIC1.13□□□□□ -2.23
ShdO88834 Gm22887-201ENSMUST00000178586 107 ntBASIC1.13□□□□□ -2.23
ShdO88834 Mir6381-201ENSMUST00000183426 87 ntBASIC1.13□□□□□ -2.23
ShdO88834 Mir6928-201ENSMUST00000185166 70 ntBASIC1.13□□□□□ -2.23
ShdO88834 Gm37545-201ENSMUST00000186512 148 ntBASIC1.13□□□□□ -2.23
ShdO88834 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.13□□□□□ -2.23
ShdO88834 Gm18213-201ENSMUST00000207850 178 ntBASIC1.13□□□□□ -2.23
ShdO88834 Mir19b-2-201ENSMUST00000083539 84 ntBASIC1.13□□□□□ -2.23
ShdO88834 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
ShdO88834 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
ShdO88834 Gm26082-201ENSMUST00000104070 127 ntBASIC1.12□□□□□ -2.23
ShdO88834 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.12□□□□□ -2.23
ShdO88834 Gm22699-201ENSMUST00000175376 105 ntBASIC1.12□□□□□ -2.23
ShdO88834 Gm22911-201ENSMUST00000177920 107 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 144.1 ms