Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.75□□□□□ -2.13
Lmx1bO88609 Gm23140-201ENSMUST00000082487 107 ntBASIC1.75□□□□□ -2.13
Lmx1bO88609 Gm23298-201ENSMUST00000083181 107 ntBASIC1.75□□□□□ -2.13
Lmx1bO88609 Gm24614-201ENSMUST00000083269 107 ntBASIC1.75□□□□□ -2.13
Lmx1bO88609 Gm22057-201ENSMUST00000083387 107 ntBASIC1.75□□□□□ -2.13
Lmx1bO88609 Gm25516-201ENSMUST00000083857 107 ntBASIC1.75□□□□□ -2.13
Lmx1bO88609 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
Lmx1bO88609 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.74□□□□□ -2.13
Lmx1bO88609 Gm22149-201ENSMUST00000104442 136 ntBASIC1.74□□□□□ -2.13
Lmx1bO88609 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.74□□□□□ -2.13
Lmx1bO88609 Gm22490-201ENSMUST00000157188 119 ntBASIC1.74□□□□□ -2.13
Lmx1bO88609 Gm27446-201ENSMUST00000183963 89 ntBASIC1.74□□□□□ -2.13
Lmx1bO88609 Gm37557-201ENSMUST00000191640 139 ntBASIC1.74□□□□□ -2.13
Lmx1bO88609 Snora20-201ENSMUST00000082703 128 ntBASIC1.74□□□□□ -2.13
Lmx1bO88609 Gm22055-201ENSMUST00000083388 107 ntBASIC1.74□□□□□ -2.13
Lmx1bO88609 Mir93-201ENSMUST00000083593 88 ntBASIC1.74□□□□□ -2.13
Lmx1bO88609 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.74□□□□□ -2.13
Lmx1bO88609 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.73□□□□□ -2.13
Lmx1bO88609 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Lmx1bO88609 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Lmx1bO88609 Gm12013-201ENSMUST00000121971 155 ntBASIC1.73□□□□□ -2.13
Lmx1bO88609 Gm24783-201ENSMUST00000157639 100 ntBASIC1.73□□□□□ -2.13
Lmx1bO88609 Gm8034-201ENSMUST00000178853 132 ntBASIC1.73□□□□□ -2.13
Lmx1bO88609 Gm37330-201ENSMUST00000192606 153 ntBASIC1.73□□□□□ -2.13
Lmx1bO88609 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Lmx1bO88609 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.73□□□□□ -2.13
Lmx1bO88609 Gm25402-201ENSMUST00000082966 131 ntBASIC1.73□□□□□ -2.13
Lmx1bO88609 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.73□□□□□ -2.13
Lmx1bO88609 Gm11856-201ENSMUST00000118712 276 ntBASIC1.72□□□□□ -2.13
Lmx1bO88609 Gm22451-201ENSMUST00000122803 151 ntBASIC1.72□□□□□ -2.13
Lmx1bO88609 Gm27898-201ENSMUST00000183987 80 ntBASIC1.72□□□□□ -2.13
Lmx1bO88609 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.72□□□□□ -2.13
Lmx1bO88609 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.72□□□□□ -2.13
Lmx1bO88609 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.71□□□□□ -2.14
Lmx1bO88609 Gm26076-201ENSMUST00000104065 105 ntBASIC1.71□□□□□ -2.14
Lmx1bO88609 Mir880-201ENSMUST00000104809 78 ntBASIC1.71□□□□□ -2.14
Lmx1bO88609 Gm12309-201ENSMUST00000119889 182 ntBASIC1.71□□□□□ -2.14
Lmx1bO88609 Gm24478-201ENSMUST00000157439 158 ntBASIC1.71□□□□□ -2.14
Lmx1bO88609 Gm22332-201ENSMUST00000158072 126 ntBASIC1.71□□□□□ -2.14
Lmx1bO88609 Gm24394-201ENSMUST00000158141 123 ntBASIC1.71□□□□□ -2.14
Lmx1bO88609 Mir3086-201ENSMUST00000175072 87 ntBASIC1.71□□□□□ -2.14
Lmx1bO88609 Mir6995-201ENSMUST00000183658 71 ntBASIC1.71□□□□□ -2.14
Lmx1bO88609 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC1.71□□□□□ -2.14
Lmx1bO88609 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.71□□□□□ -2.14
Lmx1bO88609 Gm22866-201ENSMUST00000083947 177 ntBASIC1.71□□□□□ -2.14
Lmx1bO88609 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Lmx1bO88609 Gm22196-201ENSMUST00000116865 109 ntBASIC1.7□□□□□ -2.14
Lmx1bO88609 Gm22551-201ENSMUST00000157795 103 ntBASIC1.7□□□□□ -2.14
Lmx1bO88609 Gm22727-201ENSMUST00000158090 116 ntBASIC1.7□□□□□ -2.14
Lmx1bO88609 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.7□□□□□ -2.14
Lmx1bO88609 Gm27544-201ENSMUST00000185069 155 ntBASIC1.7□□□□□ -2.14
Lmx1bO88609 Gm43324-201ENSMUST00000197482 289 ntBASIC1.7□□□□□ -2.14
Lmx1bO88609 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Lmx1bO88609 Snord43-201ENSMUST00000199549 108 ntBASIC1.7□□□□□ -2.14
Lmx1bO88609 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.7□□□□□ -2.14
Lmx1bO88609 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.7□□□□□ -2.14
Lmx1bO88609 Gm26922-201ENSMUST00000082687 72 ntBASIC1.7□□□□□ -2.14
Lmx1bO88609 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
Lmx1bO88609 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Lmx1bO88609 Gm24984-201ENSMUST00000104454 133 ntBASIC1.69□□□□□ -2.14
Lmx1bO88609 Gm25069-201ENSMUST00000175238 86 ntBASIC1.69□□□□□ -2.14
Lmx1bO88609 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.69□□□□□ -2.14
Lmx1bO88609 AC136457.1-201ENSMUST00000224195 156 ntBASIC1.69□□□□□ -2.14
Lmx1bO88609 Mir151-201ENSMUST00000083678 68 ntBASIC1.69□□□□□ -2.14
Lmx1bO88609 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Lmx1bO88609 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Lmx1bO88609 Gm22004-201ENSMUST00000101884 107 ntBASIC1.68□□□□□ -2.14
Lmx1bO88609 Mir1949-201ENSMUST00000157434 141 ntBASIC1.68□□□□□ -2.14
Lmx1bO88609 Gm20409-201ENSMUST00000173457 130 ntBASIC1.68□□□□□ -2.14
Lmx1bO88609 Gm25994-201ENSMUST00000175392 101 ntBASIC1.68□□□□□ -2.14
Lmx1bO88609 Gm25750-201ENSMUST00000175483 112 ntBASIC1.68□□□□□ -2.14
Lmx1bO88609 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.68□□□□□ -2.14
Lmx1bO88609 Mir7679-201ENSMUST00000183379 63 ntBASIC1.68□□□□□ -2.14
Lmx1bO88609 Mir6352-201ENSMUST00000184495 116 ntBASIC1.68□□□□□ -2.14
Lmx1bO88609 Gm45471-201ENSMUST00000211270 281 ntBASIC1.68□□□□□ -2.14
Lmx1bO88609 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.68□□□□□ -2.14
Lmx1bO88609 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.68□□□□□ -2.14
Lmx1bO88609 Gm24412-201ENSMUST00000083426 109 ntBASIC1.68□□□□□ -2.14
Lmx1bO88609 Mir411-201ENSMUST00000083543 82 ntBASIC1.68□□□□□ -2.14
Lmx1bO88609 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.68□□□□□ -2.14
Lmx1bO88609 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Lmx1bO88609 Gm22999-201ENSMUST00000157082 88 ntBASIC1.67□□□□□ -2.14
Lmx1bO88609 Gm24913-201ENSMUST00000157286 107 ntBASIC1.67□□□□□ -2.14
Lmx1bO88609 Gm26090-201ENSMUST00000157897 128 ntBASIC1.67□□□□□ -2.14
Lmx1bO88609 Gm26498-201ENSMUST00000177799 79 ntBASIC1.67□□□□□ -2.14
Lmx1bO88609 Gm26230-201ENSMUST00000180141 79 ntBASIC1.67□□□□□ -2.14
Lmx1bO88609 Mir6377-201ENSMUST00000183760 114 ntBASIC1.67□□□□□ -2.14
Lmx1bO88609 Mir6950-201ENSMUST00000184438 73 ntBASIC1.67□□□□□ -2.14
Lmx1bO88609 Mir6419-201ENSMUST00000184784 113 ntBASIC1.67□□□□□ -2.14
Lmx1bO88609 AC126939.1-201ENSMUST00000224943 226 ntBASIC1.67□□□□□ -2.14
Lmx1bO88609 Mir451a-201ENSMUST00000093557 72 ntBASIC1.67□□□□□ -2.14
Lmx1bO88609 Gm22031-201ENSMUST00000116945 126 ntBASIC1.66□□□□□ -2.14
Lmx1bO88609 Gm11792-201ENSMUST00000120640 168 ntBASIC1.66□□□□□ -2.14
Lmx1bO88609 Gm22556-201ENSMUST00000157803 100 ntBASIC1.66□□□□□ -2.14
Lmx1bO88609 Gm23996-201ENSMUST00000158062 131 ntBASIC1.66□□□□□ -2.14
Lmx1bO88609 Gm25678-201ENSMUST00000174984 73 ntBASIC1.66□□□□□ -2.14
Lmx1bO88609 Mir7678-201ENSMUST00000185076 71 ntBASIC1.66□□□□□ -2.14
Lmx1bO88609 Gm45268-201ENSMUST00000210046 370 ntBASIC1.66□□□□□ -2.14
Lmx1bO88609 Mir301b-201ENSMUST00000102333 97 ntBASIC1.65□□□□□ -2.15
Lmx1bO88609 Gm23654-201ENSMUST00000116758 126 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms