Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.31□□□□□ -2.46
Ttc3O88196 Gm25771-201ENSMUST00000158565 144 ntBASIC-0.32□□□□□ -2.46
Ttc3O88196 Gm24810-201ENSMUST00000175317 70 ntBASIC-0.32□□□□□ -2.46
Ttc3O88196 Gm23793-201ENSMUST00000179396 117 ntBASIC-0.32□□□□□ -2.46
Ttc3O88196 Mir7657-201ENSMUST00000196051 57 ntBASIC-0.32□□□□□ -2.46
Ttc3O88196 Gm29818-201ENSMUST00000218070 165 ntBASIC-0.32□□□□□ -2.46
Ttc3O88196 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.32□□□□□ -2.46
Ttc3O88196 Gm23845-201ENSMUST00000083834 152 ntBASIC-0.32□□□□□ -2.46
Ttc3O88196 Gm12469-201ENSMUST00000117623 207 ntBASIC-0.32□□□□□ -2.46
Ttc3O88196 Gm26076-201ENSMUST00000104065 105 ntBASIC-0.33□□□□□ -2.46
Ttc3O88196 Gm25982-201ENSMUST00000157920 101 ntBASIC-0.33□□□□□ -2.46
Ttc3O88196 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.33□□□□□ -2.46
Ttc3O88196 Gm37313-201ENSMUST00000191673 290 ntBASIC-0.33□□□□□ -2.46
Ttc3O88196 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.33□□□□□ -2.46
Ttc3O88196 Gm25875-201ENSMUST00000104323 107 ntBASIC-0.34□□□□□ -2.46
Ttc3O88196 Gm24634-201ENSMUST00000158672 107 ntBASIC-0.34□□□□□ -2.46
Ttc3O88196 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.34□□□□□ -2.46
Ttc3O88196 Gm9227-201ENSMUST00000194733 566 ntBASIC-0.34□□□□□ -2.46
Ttc3O88196 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.34□□□□□ -2.46
Ttc3O88196 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.34□□□□□ -2.46
Ttc3O88196 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC-0.34□□□□□ -2.46
Ttc3O88196 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.34□□□□□ -2.46
Ttc3O88196 AC116460.1-201ENSMUST00000219040 313 ntBASIC-0.34□□□□□ -2.46
Ttc3O88196 AC164117.2-201ENSMUST00000222090 327 ntBASIC-0.34□□□□□ -2.46
Ttc3O88196 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.34□□□□□ -2.46
Ttc3O88196 Gm42606-201ENSMUST00000114209 239 ntBASIC-0.34□□□□□ -2.46
Ttc3O88196 Gm23881-201ENSMUST00000116872 66 ntBASIC-0.34□□□□□ -2.46
Ttc3O88196 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.34□□□□□ -2.46
Ttc3O88196 Gm22767-201ENSMUST00000158365 165 ntBASIC-0.34□□□□□ -2.46
Ttc3O88196 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.34□□□□□ -2.46
Ttc3O88196 Mir6369-201ENSMUST00000183772 106 ntBASIC-0.34□□□□□ -2.46
Ttc3O88196 Mir327-201ENSMUST00000199328 69 ntBASIC-0.34□□□□□ -2.46
Ttc3O88196 Gm19790-201ENSMUST00000214414 251 ntBASIC-0.34□□□□□ -2.46
Ttc3O88196 CT025526.1-201ENSMUST00000217327 267 ntBASIC-0.34□□□□□ -2.46
Ttc3O88196 AL627387.1-201ENSMUST00000226063 250 ntBASIC-0.34□□□□□ -2.46
Ttc3O88196 AC162857.1-201ENSMUST00000226614 400 ntBASIC-0.34□□□□□ -2.46
Ttc3O88196 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.35□□□□□ -2.46
Ttc3O88196 Gm24499-201ENSMUST00000158446 104 ntBASIC-0.35□□□□□ -2.47
Ttc3O88196 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.35□□□□□ -2.47
Ttc3O88196 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.35□□□□□ -2.47
Ttc3O88196 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-0.35□□□□□ -2.47
Ttc3O88196 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC-0.36□□□□□ -2.47
Ttc3O88196 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.36□□□□□ -2.47
Ttc3O88196 Gm24129-201ENSMUST00000158537 97 ntBASIC-0.36□□□□□ -2.47
Ttc3O88196 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC-0.36□□□□□ -2.47
Ttc3O88196 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.36□□□□□ -2.47
Ttc3O88196 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.36□□□□□ -2.47
Ttc3O88196 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.36□□□□□ -2.47
Ttc3O88196 Gm27047-201ENSMUST00000183072 1819 ntBASIC-0.36□□□□□ -2.47
Ttc3O88196 Gm25611-201ENSMUST00000104017 133 ntBASIC-0.36□□□□□ -2.47
Ttc3O88196 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC-0.36□□□□□ -2.47
Ttc3O88196 Gm14919-201ENSMUST00000120839 390 ntBASIC-0.36□□□□□ -2.47
Ttc3O88196 Gm22999-201ENSMUST00000157082 88 ntBASIC-0.36□□□□□ -2.47
Ttc3O88196 Gm24509-201ENSMUST00000157086 101 ntBASIC-0.36□□□□□ -2.47
Ttc3O88196 Gm25358-201ENSMUST00000157189 101 ntBASIC-0.36□□□□□ -2.47
Ttc3O88196 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.36□□□□□ -2.47
Ttc3O88196 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.36□□□□□ -2.47
Ttc3O88196 Gm7240-201ENSMUST00000220769 664 ntBASIC-0.36□□□□□ -2.47
Ttc3O88196 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.36□□□□□ -2.47
Ttc3O88196 Gm25793-201ENSMUST00000083287 107 ntBASIC-0.36□□□□□ -2.47
Ttc3O88196 Gm25414-201ENSMUST00000101814 107 ntBASIC-0.37□□□□□ -2.47
Ttc3O88196 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
Ttc3O88196 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.37□□□□□ -2.47
Ttc3O88196 Gm29512-201ENSMUST00000185544 315 ntBASIC-0.37□□□□□ -2.47
Ttc3O88196 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.37□□□□□ -2.47
Ttc3O88196 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.37□□□□□ -2.47
Ttc3O88196 Mir183-201ENSMUST00000083685 70 ntBASIC-0.37□□□□□ -2.47
Ttc3O88196 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
Ttc3O88196 Snord100-201ENSMUST00000116836 74 ntBASIC-0.37□□□□□ -2.47
Ttc3O88196 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.37□□□□□ -2.47
Ttc3O88196 Gm25108-201ENSMUST00000122473 78 ntBASIC-0.37□□□□□ -2.47
Ttc3O88196 Gm22199-201ENSMUST00000122660 126 ntBASIC-0.37□□□□□ -2.47
Ttc3O88196 Gm23022-201ENSMUST00000158768 180 ntBASIC-0.37□□□□□ -2.47
Ttc3O88196 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.37□□□□□ -2.47
Ttc3O88196 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.37□□□□□ -2.47
Ttc3O88196 AC131720.2-201ENSMUST00000220420 431 ntBASIC-0.37□□□□□ -2.47
Ttc3O88196 Gm25588-201ENSMUST00000082501 140 ntBASIC-0.37□□□□□ -2.47
Ttc3O88196 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-0.38□□□□□ -2.47
Ttc3O88196 Gm14307-201ENSMUST00000118930 291 ntBASIC-0.38□□□□□ -2.47
Ttc3O88196 Gm14297-201ENSMUST00000129110 291 ntBASIC-0.38□□□□□ -2.47
Ttc3O88196 Gm16362-201ENSMUST00000135189 214 ntBASIC-0.38□□□□□ -2.47
Ttc3O88196 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.38□□□□□ -2.47
Ttc3O88196 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.38□□□□□ -2.47
Ttc3O88196 Gm29140-201ENSMUST00000190187 476 ntBASIC-0.38□□□□□ -2.47
Ttc3O88196 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.38□□□□□ -2.47
Ttc3O88196 Gm24453-201ENSMUST00000083346 76 ntBASIC-0.38□□□□□ -2.47
Ttc3O88196 Gm22085-201ENSMUST00000158344 110 ntBASIC-0.39□□□□□ -2.47
Ttc3O88196 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC-0.39□□□□□ -2.47
Ttc3O88196 Gm25634-201ENSMUST00000082667 105 ntBASIC-0.39□□□□□ -2.47
Ttc3O88196 Gm26202-201ENSMUST00000082910 65 ntBASIC-0.39□□□□□ -2.47
Ttc3O88196 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.39□□□□□ -2.47
Ttc3O88196 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.39□□□□□ -2.47
Ttc3O88196 Cfap61-214ENSMUST00000167179 183 ntBASIC-0.39□□□□□ -2.47
Ttc3O88196 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-0.39□□□□□ -2.47
Ttc3O88196 Mir574-201ENSMUST00000103854 78 ntBASIC-0.4□□□□□ -2.47
Ttc3O88196 Gm26290-201ENSMUST00000158891 145 ntBASIC-0.4□□□□□ -2.47
Ttc3O88196 Gm23770-201ENSMUST00000178009 108 ntBASIC-0.4□□□□□ -2.47
Ttc3O88196 Gm22832-201ENSMUST00000178022 108 ntBASIC-0.4□□□□□ -2.47
Ttc3O88196 Gm23863-201ENSMUST00000178265 108 ntBASIC-0.4□□□□□ -2.47
Ttc3O88196 Gm24828-201ENSMUST00000178507 108 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms