Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
ClockO08785 Gm26293-201ENSMUST00000104170 84 ntBASIC0.08□□□□□ -2.4
ClockO08785 Gm6952-201ENSMUST00000118629 159 ntBASIC0.08□□□□□ -2.4
ClockO08785 Gm23761-201ENSMUST00000158347 104 ntBASIC0.08□□□□□ -2.4
ClockO08785 Gm25771-201ENSMUST00000158565 144 ntBASIC0.08□□□□□ -2.4
ClockO08785 Gm25247-201ENSMUST00000175475 90 ntBASIC0.08□□□□□ -2.4
ClockO08785 Gm27672-201ENSMUST00000183751 204 ntBASIC0.08□□□□□ -2.4
ClockO08785 Gm27747-201ENSMUST00000184707 85 ntBASIC0.08□□□□□ -2.4
ClockO08785 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC0.08□□□□□ -2.4
ClockO08785 Gm37715-201ENSMUST00000193206 235 ntBASIC0.08□□□□□ -2.4
ClockO08785 Mir7229-201ENSMUST00000197062 53 ntBASIC0.08□□□□□ -2.4
ClockO08785 Gm25848-201ENSMUST00000116790 144 ntBASIC0.07□□□□□ -2.4
ClockO08785 Gm13345-201ENSMUST00000121928 228 ntBASIC0.07□□□□□ -2.4
ClockO08785 Mir100-201ENSMUST00000175270 80 ntBASIC0.07□□□□□ -2.4
ClockO08785 Gm25935-201ENSMUST00000178746 107 ntBASIC0.07□□□□□ -2.4
ClockO08785 Gm23466-201ENSMUST00000157133 106 ntBASIC0.06□□□□□ -2.4
ClockO08785 Gm22340-201ENSMUST00000157717 114 ntBASIC0.06□□□□□ -2.4
ClockO08785 Gm28016-201ENSMUST00000184594 196 ntBASIC0.06□□□□□ -2.4
ClockO08785 Gm37330-201ENSMUST00000192606 153 ntBASIC0.06□□□□□ -2.4
ClockO08785 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
ClockO08785 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC0.06□□□□□ -2.4
ClockO08785 Gm25111-201ENSMUST00000116686 147 ntBASIC0.05□□□□□ -2.4
ClockO08785 Gm14039-201ENSMUST00000118705 101 ntBASIC0.05□□□□□ -2.4
ClockO08785 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.05□□□□□ -2.4
ClockO08785 Gm17919-201ENSMUST00000173344 312 ntBASIC0.05□□□□□ -2.4
ClockO08785 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.05□□□□□ -2.4
ClockO08785 Gm28767-201ENSMUST00000188601 114 ntBASIC0.05□□□□□ -2.4
ClockO08785 Gm23301-201ENSMUST00000082713 65 ntBASIC0.05□□□□□ -2.4
ClockO08785 Gm22836-201ENSMUST00000158441 61 ntBASIC0.04□□□□□ -2.4
ClockO08785 Gm23821-201ENSMUST00000158738 106 ntBASIC0.04□□□□□ -2.4
ClockO08785 Gm25161-201ENSMUST00000158913 132 ntBASIC0.04□□□□□ -2.4
ClockO08785 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.04□□□□□ -2.4
ClockO08785 Gm27993-201ENSMUST00000184362 85 ntBASIC0.04□□□□□ -2.4
ClockO08785 Gm19790-201ENSMUST00000214414 251 ntBASIC0.04□□□□□ -2.4
ClockO08785 Gm22479-201ENSMUST00000122566 81 ntBASIC0.03□□□□□ -2.4
ClockO08785 Gm25375-201ENSMUST00000158157 135 ntBASIC0.03□□□□□ -2.4
ClockO08785 Mir8107-201ENSMUST00000184024 117 ntBASIC0.03□□□□□ -2.4
ClockO08785 Gm44455-201ENSMUST00000200061 82 ntBASIC0.03□□□□□ -2.4
ClockO08785 Gm24929-201ENSMUST00000083403 139 ntBASIC0.03□□□□□ -2.4
ClockO08785 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.03□□□□□ -2.4
ClockO08785 Gm24764-201ENSMUST00000083686 199 ntBASIC0.03□□□□□ -2.4
ClockO08785 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.03□□□□□ -2.4
ClockO08785 Mir670-201ENSMUST00000102380 100 ntBASIC0.02□□□□□ -2.41
ClockO08785 Gm24867-201ENSMUST00000104161 107 ntBASIC0.02□□□□□ -2.41
ClockO08785 Gm23531-201ENSMUST00000104567 68 ntBASIC0.02□□□□□ -2.41
ClockO08785 Gm23214-201ENSMUST00000122716 157 ntBASIC0.02□□□□□ -2.41
ClockO08785 Gm22216-201ENSMUST00000157557 114 ntBASIC0.02□□□□□ -2.41
ClockO08785 Gm25267-201ENSMUST00000158522 63 ntBASIC0.02□□□□□ -2.41
ClockO08785 Gm27943-201ENSMUST00000184844 116 ntBASIC0.02□□□□□ -2.41
ClockO08785 Gm29107-201ENSMUST00000190910 347 ntBASIC0.02□□□□□ -2.41
ClockO08785 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.02□□□□□ -2.41
ClockO08785 Mir875-201ENSMUST00000104698 78 ntBASIC0.01□□□□□ -2.41
ClockO08785 Gm14567-201ENSMUST00000117155 174 ntBASIC0.01□□□□□ -2.41
ClockO08785 Gm11322-201ENSMUST00000118095 435 ntBASIC0.01□□□□□ -2.41
ClockO08785 Gm24594-201ENSMUST00000122502 99 ntBASIC0.01□□□□□ -2.41
ClockO08785 Gm22088-201ENSMUST00000158341 117 ntBASIC0.01□□□□□ -2.41
ClockO08785 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.01□□□□□ -2.41
ClockO08785 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.01□□□□□ -2.41
ClockO08785 Gm24278-201ENSMUST00000104239 127 ntBASIC0□□□□□ -2.41
ClockO08785 Snord100-201ENSMUST00000116836 74 ntBASIC0□□□□□ -2.41
ClockO08785 Gm24575-201ENSMUST00000175502 77 ntBASIC0□□□□□ -2.41
ClockO08785 Gm28001-201ENSMUST00000183561 117 ntBASIC0□□□□□ -2.41
ClockO08785 Gm38364-201ENSMUST00000191814 179 ntBASIC0□□□□□ -2.41
ClockO08785 Mir721-201ENSMUST00000200230 88 ntBASIC0□□□□□ -2.41
ClockO08785 n-R5s96-201ENSMUST00000082574 124 ntBASIC0□□□□□ -2.41
ClockO08785 Gm25703-201ENSMUST00000083123 151 ntBASIC0□□□□□ -2.41
ClockO08785 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0□□□□□ -2.41
ClockO08785 Gm10172-201ENSMUST00000085929 558 ntBASIC0□□□□□ -2.41
ClockO08785 Gm14792-201ENSMUST00000119725 258 ntBASIC-0.01□□□□□ -2.41
ClockO08785 Gm24488-201ENSMUST00000179934 127 ntBASIC-0.01□□□□□ -2.41
ClockO08785 Gm25701-201ENSMUST00000179988 127 ntBASIC-0.01□□□□□ -2.41
ClockO08785 Gm26431-201ENSMUST00000180199 127 ntBASIC-0.01□□□□□ -2.41
ClockO08785 Gm6003-201ENSMUST00000187903 463 ntBASIC-0.01□□□□□ -2.41
ClockO08785 Gm24460-201ENSMUST00000082731 106 ntBASIC-0.01□□□□□ -2.41
ClockO08785 Mir377-201ENSMUST00000083504 68 ntBASIC-0.01□□□□□ -2.41
ClockO08785 Gm25512-201ENSMUST00000083863 107 ntBASIC-0.01□□□□□ -2.41
ClockO08785 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.01□□□□□ -2.41
ClockO08785 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-0.01□□□□□ -2.41
ClockO08785 Gm27845-201ENSMUST00000184479 114 ntBASIC-0.02□□□□□ -2.41
ClockO08785 Gm25894-201ENSMUST00000083458 75 ntBASIC-0.02□□□□□ -2.41
ClockO08785 Gm24445-201ENSMUST00000083981 107 ntBASIC-0.02□□□□□ -2.41
ClockO08785 Gm11388-201ENSMUST00000120908 159 ntBASIC-0.03□□□□□ -2.41
ClockO08785 Gm23994-201ENSMUST00000158059 88 ntBASIC-0.03□□□□□ -2.41
ClockO08785 Gm16550-201ENSMUST00000162550 126 ntBASIC-0.03□□□□□ -2.41
ClockO08785 Mir6336-201ENSMUST00000183581 130 ntBASIC-0.03□□□□□ -2.41
ClockO08785 Gm44345-201ENSMUST00000199560 135 ntBASIC-0.03□□□□□ -2.41
ClockO08785 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-0.03□□□□□ -2.41
ClockO08785 Snord82-201ENSMUST00000082889 70 ntBASIC-0.03□□□□□ -2.41
ClockO08785 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.04□□□□□ -2.42
ClockO08785 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.04□□□□□ -2.42
ClockO08785 Gm23180-201ENSMUST00000158686 125 ntBASIC-0.04□□□□□ -2.42
ClockO08785 Gm26160-201ENSMUST00000158965 63 ntBASIC-0.04□□□□□ -2.42
ClockO08785 Mir3105-201ENSMUST00000175480 85 ntBASIC-0.04□□□□□ -2.42
ClockO08785 Gm25464-201ENSMUST00000175481 107 ntBASIC-0.04□□□□□ -2.42
ClockO08785 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
ClockO08785 Snord60-201ENSMUST00000082834 78 ntBASIC-0.04□□□□□ -2.42
ClockO08785 Mir181a-2-201ENSMUST00000083489 76 ntBASIC-0.04□□□□□ -2.42
ClockO08785 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
ClockO08785 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.05□□□□□ -2.42
ClockO08785 Scarna9-201ENSMUST00000104318 70 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms