Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Ccdc9bA3KGF9 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Ccdc9bA3KGF9 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.26□□□□□ -2.05
Ccdc9bA3KGF9 Gm14400-201ENSMUST00000117234 2135 ntBASIC2.26□□□□□ -2.05
Ccdc9bA3KGF9 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
Ccdc9bA3KGF9 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Ccdc9bA3KGF9 Gm24670-201ENSMUST00000104154 132 ntBASIC2.25□□□□□ -2.05
Ccdc9bA3KGF9 Gm37807-201ENSMUST00000194310 190 ntBASIC2.25□□□□□ -2.05
Ccdc9bA3KGF9 Gm25820-201ENSMUST00000198589 127 ntBASIC2.25□□□□□ -2.05
Ccdc9bA3KGF9 Gm24099-201ENSMUST00000083384 107 ntBASIC2.25□□□□□ -2.05
Ccdc9bA3KGF9 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.25□□□□□ -2.05
Ccdc9bA3KGF9 Mir107-201ENSMUST00000083660 87 ntBASIC2.25□□□□□ -2.05
Ccdc9bA3KGF9 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
Ccdc9bA3KGF9 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Ccdc9bA3KGF9 Gm22319-201ENSMUST00000157147 122 ntBASIC2.24□□□□□ -2.05
Ccdc9bA3KGF9 Gm25113-201ENSMUST00000157185 143 ntBASIC2.24□□□□□ -2.05
Ccdc9bA3KGF9 Gm23670-201ENSMUST00000157469 119 ntBASIC2.24□□□□□ -2.05
Ccdc9bA3KGF9 Gm23384-201ENSMUST00000158593 103 ntBASIC2.24□□□□□ -2.05
Ccdc9bA3KGF9 Gm20391-201ENSMUST00000174722 106 ntBASIC2.24□□□□□ -2.05
Ccdc9bA3KGF9 Gm24366-201ENSMUST00000175383 86 ntBASIC2.24□□□□□ -2.05
Ccdc9bA3KGF9 Gm23375-201ENSMUST00000175407 83 ntBASIC2.24□□□□□ -2.05
Ccdc9bA3KGF9 Mir6379-201ENSMUST00000183392 115 ntBASIC2.24□□□□□ -2.05
Ccdc9bA3KGF9 Mir7226-201ENSMUST00000184953 60 ntBASIC2.24□□□□□ -2.05
Ccdc9bA3KGF9 Gm44477-201ENSMUST00000199661 110 ntBASIC2.24□□□□□ -2.05
Ccdc9bA3KGF9 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
Ccdc9bA3KGF9 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Ccdc9bA3KGF9 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.23□□□□□ -2.05
Ccdc9bA3KGF9 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.23□□□□□ -2.05
Ccdc9bA3KGF9 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Ccdc9bA3KGF9 Snora36b-201ENSMUST00000104383 132 ntBASIC2.23□□□□□ -2.05
Ccdc9bA3KGF9 Gm25289-201ENSMUST00000122799 119 ntBASIC2.23□□□□□ -2.05
Ccdc9bA3KGF9 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.23□□□□□ -2.05
Ccdc9bA3KGF9 Gm23986-201ENSMUST00000157144 63 ntBASIC2.23□□□□□ -2.05
Ccdc9bA3KGF9 Gm23048-201ENSMUST00000157237 129 ntBASIC2.23□□□□□ -2.05
Ccdc9bA3KGF9 Gm22551-201ENSMUST00000157795 103 ntBASIC2.23□□□□□ -2.05
Ccdc9bA3KGF9 Gm25011-201ENSMUST00000158398 126 ntBASIC2.23□□□□□ -2.05
Ccdc9bA3KGF9 Gm23208-201ENSMUST00000158666 127 ntBASIC2.23□□□□□ -2.05
Ccdc9bA3KGF9 Gm25949-201ENSMUST00000175333 114 ntBASIC2.23□□□□□ -2.05
Ccdc9bA3KGF9 Mir6406-201ENSMUST00000183592 120 ntBASIC2.23□□□□□ -2.05
Ccdc9bA3KGF9 Gm25636-201ENSMUST00000082666 133 ntBASIC2.23□□□□□ -2.05
Ccdc9bA3KGF9 Gm24412-201ENSMUST00000083426 109 ntBASIC2.23□□□□□ -2.05
Ccdc9bA3KGF9 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
Ccdc9bA3KGF9 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Ccdc9bA3KGF9 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.22□□□□□ -2.05
Ccdc9bA3KGF9 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.22□□□□□ -2.05
Ccdc9bA3KGF9 Gm23600-201ENSMUST00000157260 71 ntBASIC2.22□□□□□ -2.05
Ccdc9bA3KGF9 Gm16550-201ENSMUST00000162550 126 ntBASIC2.22□□□□□ -2.05
Ccdc9bA3KGF9 Snord87-201ENSMUST00000175437 87 ntBASIC2.22□□□□□ -2.05
Ccdc9bA3KGF9 Mir7017-201ENSMUST00000184894 62 ntBASIC2.22□□□□□ -2.05
Ccdc9bA3KGF9 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.22□□□□□ -2.05
Ccdc9bA3KGF9 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Ccdc9bA3KGF9 Gm25680-201ENSMUST00000116917 126 ntBASIC2.21□□□□□ -2.06
Ccdc9bA3KGF9 Gm22635-201ENSMUST00000116962 126 ntBASIC2.21□□□□□ -2.06
Ccdc9bA3KGF9 Gm11248-201ENSMUST00000119568 201 ntBASIC2.21□□□□□ -2.06
Ccdc9bA3KGF9 Gm26104-201ENSMUST00000157250 108 ntBASIC2.21□□□□□ -2.06
Ccdc9bA3KGF9 Gm23601-201ENSMUST00000157259 131 ntBASIC2.21□□□□□ -2.06
Ccdc9bA3KGF9 Gm22963-201ENSMUST00000157960 91 ntBASIC2.21□□□□□ -2.06
Ccdc9bA3KGF9 Gm22425-201ENSMUST00000158532 138 ntBASIC2.21□□□□□ -2.06
Ccdc9bA3KGF9 Gm24880-201ENSMUST00000158776 85 ntBASIC2.21□□□□□ -2.06
Ccdc9bA3KGF9 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.21□□□□□ -2.06
Ccdc9bA3KGF9 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Ccdc9bA3KGF9 Mir322-201ENSMUST00000083484 95 ntBASIC2.21□□□□□ -2.06
Ccdc9bA3KGF9 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Ccdc9bA3KGF9 Gm13433-201ENSMUST00000121701 240 ntBASIC2.2□□□□□ -2.06
Ccdc9bA3KGF9 Mir6997-201ENSMUST00000184313 71 ntBASIC2.2□□□□□ -2.06
Ccdc9bA3KGF9 Gm44462-201ENSMUST00000199696 129 ntBASIC2.2□□□□□ -2.06
Ccdc9bA3KGF9 Gm24524-201ENSMUST00000082925 170 ntBASIC2.2□□□□□ -2.06
Ccdc9bA3KGF9 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.2□□□□□ -2.06
Ccdc9bA3KGF9 Mir410-201ENSMUST00000083563 81 ntBASIC2.2□□□□□ -2.06
Ccdc9bA3KGF9 Gm44560-201ENSMUST00000207816 3115 ntBASIC2.2□□□□□ -2.06
Ccdc9bA3KGF9 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Ccdc9bA3KGF9 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Ccdc9bA3KGF9 Mir344e-201ENSMUST00000104677 66 ntBASIC2.19□□□□□ -2.06
Ccdc9bA3KGF9 Gm26253-201ENSMUST00000122493 103 ntBASIC2.19□□□□□ -2.06
Ccdc9bA3KGF9 Gm23223-201ENSMUST00000158119 127 ntBASIC2.19□□□□□ -2.06
Ccdc9bA3KGF9 Gm24769-201ENSMUST00000158506 129 ntBASIC2.19□□□□□ -2.06
Ccdc9bA3KGF9 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC2.19□□□□□ -2.06
Ccdc9bA3KGF9 Mir221-201ENSMUST00000083488 95 ntBASIC2.19□□□□□ -2.06
Ccdc9bA3KGF9 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Ccdc9bA3KGF9 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.18□□□□□ -2.06
Ccdc9bA3KGF9 Gm26154-201ENSMUST00000102339 96 ntBASIC2.18□□□□□ -2.06
Ccdc9bA3KGF9 Mir654-201ENSMUST00000104787 84 ntBASIC2.18□□□□□ -2.06
Ccdc9bA3KGF9 Gm24907-201ENSMUST00000116932 128 ntBASIC2.18□□□□□ -2.06
Ccdc9bA3KGF9 Gm14588-201ENSMUST00000119895 172 ntBASIC2.18□□□□□ -2.06
Ccdc9bA3KGF9 n-R5s39-201ENSMUST00000122613 108 ntBASIC2.18□□□□□ -2.06
Ccdc9bA3KGF9 Gm22803-201ENSMUST00000158049 283 ntBASIC2.18□□□□□ -2.06
Ccdc9bA3KGF9 Gm25044-201ENSMUST00000158603 104 ntBASIC2.18□□□□□ -2.06
Ccdc9bA3KGF9 Gm25368-201ENSMUST00000158847 131 ntBASIC2.18□□□□□ -2.06
Ccdc9bA3KGF9 Gm16539-201ENSMUST00000160086 327 ntBASIC2.18□□□□□ -2.06
Ccdc9bA3KGF9 Mir21c-201ENSMUST00000184910 78 ntBASIC2.18□□□□□ -2.06
Ccdc9bA3KGF9 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Ccdc9bA3KGF9 Gm23980-201ENSMUST00000157135 158 ntBASIC2.17□□□□□ -2.06
Ccdc9bA3KGF9 Gm22517-201ENSMUST00000158265 136 ntBASIC2.17□□□□□ -2.06
Ccdc9bA3KGF9 Gm23817-201ENSMUST00000158449 104 ntBASIC2.17□□□□□ -2.06
Ccdc9bA3KGF9 Gm25838-201ENSMUST00000158920 120 ntBASIC2.17□□□□□ -2.06
Ccdc9bA3KGF9 Gm23005-201ENSMUST00000158950 136 ntBASIC2.17□□□□□ -2.06
Ccdc9bA3KGF9 Gm26466-201ENSMUST00000179615 79 ntBASIC2.17□□□□□ -2.06
Ccdc9bA3KGF9 Gm27722-201ENSMUST00000183908 76 ntBASIC2.17□□□□□ -2.06
Ccdc9bA3KGF9 Mir6925-201ENSMUST00000197857 70 ntBASIC2.17□□□□□ -2.06
Ccdc9bA3KGF9 Gm42935-201ENSMUST00000202004 151 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms