Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Mir669a-12-201ENSMUST00000197274 87 ntBASIC0.28□□□□□ -2.36
Scn3aA2ASI5 Mir669a-5-201ENSMUST00000197439 87 ntBASIC0.28□□□□□ -2.36
Scn3aA2ASI5 Mir669a-10-201ENSMUST00000197745 87 ntBASIC0.28□□□□□ -2.36
Scn3aA2ASI5 Mir669a-11-201ENSMUST00000197952 87 ntBASIC0.28□□□□□ -2.36
Scn3aA2ASI5 Mir669a-4-201ENSMUST00000198665 87 ntBASIC0.28□□□□□ -2.36
Scn3aA2ASI5 Mir669a-9-201ENSMUST00000200087 87 ntBASIC0.28□□□□□ -2.36
Scn3aA2ASI5 Mir669a-8-201ENSMUST00000200268 87 ntBASIC0.28□□□□□ -2.36
Scn3aA2ASI5 Gm43505-201ENSMUST00000200579 139 ntBASIC0.28□□□□□ -2.36
Scn3aA2ASI5 Gm8508-201ENSMUST00000061226 363 ntBASIC0.28□□□□□ -2.36
Scn3aA2ASI5 Gm22784-201ENSMUST00000104088 132 ntBASIC0.28□□□□□ -2.36
Scn3aA2ASI5 Gm23219-201ENSMUST00000158123 87 ntBASIC0.28□□□□□ -2.36
Scn3aA2ASI5 Gm24549-201ENSMUST00000158647 139 ntBASIC0.28□□□□□ -2.36
Scn3aA2ASI5 Gm27993-201ENSMUST00000184362 85 ntBASIC0.28□□□□□ -2.36
Scn3aA2ASI5 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC0.28□□□□□ -2.36
Scn3aA2ASI5 Gm3702-201ENSMUST00000211754 346 ntBASIC0.28□□□□□ -2.36
Scn3aA2ASI5 Mir466p-201ENSMUST00000103925 89 ntBASIC0.27□□□□□ -2.37
Scn3aA2ASI5 Gm22340-201ENSMUST00000157717 114 ntBASIC0.27□□□□□ -2.37
Scn3aA2ASI5 Gm19572-201ENSMUST00000214326 338 ntBASIC0.27□□□□□ -2.37
Scn3aA2ASI5 Gm22557-201ENSMUST00000157804 102 ntBASIC0.26□□□□□ -2.37
Scn3aA2ASI5 Gm22706-201ENSMUST00000157907 112 ntBASIC0.26□□□□□ -2.37
Scn3aA2ASI5 Gm23180-201ENSMUST00000158686 125 ntBASIC0.26□□□□□ -2.37
Scn3aA2ASI5 Mir377-201ENSMUST00000083504 68 ntBASIC0.26□□□□□ -2.37
Scn3aA2ASI5 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.26□□□□□ -2.37
Scn3aA2ASI5 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
Scn3aA2ASI5 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.26□□□□□ -2.37
Scn3aA2ASI5 Gm24121-201ENSMUST00000102029 106 ntBASIC0.26□□□□□ -2.37
Scn3aA2ASI5 Gm24867-201ENSMUST00000104161 107 ntBASIC0.26□□□□□ -2.37
Scn3aA2ASI5 Gm24555-201ENSMUST00000104548 124 ntBASIC0.26□□□□□ -2.37
Scn3aA2ASI5 Gm14792-201ENSMUST00000119725 258 ntBASIC0.26□□□□□ -2.37
Scn3aA2ASI5 Gm23579-201ENSMUST00000158528 103 ntBASIC0.26□□□□□ -2.37
Scn3aA2ASI5 Gm22466-201ENSMUST00000175278 69 ntBASIC0.26□□□□□ -2.37
Scn3aA2ASI5 Gm27289-201ENSMUST00000183341 82 ntBASIC0.26□□□□□ -2.37
Scn3aA2ASI5 Mir30f-201ENSMUST00000196073 92 ntBASIC0.26□□□□□ -2.37
Scn3aA2ASI5 Gm26360-201ENSMUST00000158872 103 ntBASIC0.25□□□□□ -2.37
Scn3aA2ASI5 Gm16307-201ENSMUST00000161269 210 ntBASIC0.25□□□□□ -2.37
Scn3aA2ASI5 Gm28435-201ENSMUST00000185496 108 ntBASIC0.25□□□□□ -2.37
Scn3aA2ASI5 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Scn3aA2ASI5 Gm24460-201ENSMUST00000082731 106 ntBASIC0.25□□□□□ -2.37
Scn3aA2ASI5 Gm25814-201ENSMUST00000082754 107 ntBASIC0.25□□□□□ -2.37
Scn3aA2ASI5 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.25□□□□□ -2.37
Scn3aA2ASI5 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
Scn3aA2ASI5 Gm23941-201ENSMUST00000101953 107 ntBASIC0.25□□□□□ -2.37
Scn3aA2ASI5 Gm6952-201ENSMUST00000118629 159 ntBASIC0.25□□□□□ -2.37
Scn3aA2ASI5 Gm11388-201ENSMUST00000120908 159 ntBASIC0.25□□□□□ -2.37
Scn3aA2ASI5 Gm25494-201ENSMUST00000158143 100 ntBASIC0.25□□□□□ -2.37
Scn3aA2ASI5 Gm24724-201ENSMUST00000158230 107 ntBASIC0.25□□□□□ -2.37
Scn3aA2ASI5 Mir7657-201ENSMUST00000196051 57 ntBASIC0.25□□□□□ -2.37
Scn3aA2ASI5 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.24□□□□□ -2.37
Scn3aA2ASI5 Mir709-201ENSMUST00000102190 88 ntBASIC0.24□□□□□ -2.37
Scn3aA2ASI5 Snord19-201ENSMUST00000104609 76 ntBASIC0.24□□□□□ -2.37
Scn3aA2ASI5 Gm26279-201ENSMUST00000157095 102 ntBASIC0.24□□□□□ -2.37
Scn3aA2ASI5 Gm24476-201ENSMUST00000157437 131 ntBASIC0.24□□□□□ -2.37
Scn3aA2ASI5 Mir100-201ENSMUST00000175270 80 ntBASIC0.24□□□□□ -2.37
Scn3aA2ASI5 Gm44211-201ENSMUST00000204867 145 ntBASIC0.24□□□□□ -2.37
Scn3aA2ASI5 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.24□□□□□ -2.37
Scn3aA2ASI5 Mir670-201ENSMUST00000102380 100 ntBASIC0.23□□□□□ -2.37
Scn3aA2ASI5 Gm22999-201ENSMUST00000157082 88 ntBASIC0.23□□□□□ -2.37
Scn3aA2ASI5 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC0.23□□□□□ -2.37
Scn3aA2ASI5 Gm23047-201ENSMUST00000177661 94 ntBASIC0.23□□□□□ -2.37
Scn3aA2ASI5 Mir6390-201ENSMUST00000184405 129 ntBASIC0.23□□□□□ -2.37
Scn3aA2ASI5 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.23□□□□□ -2.37
Scn3aA2ASI5 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.23□□□□□ -2.37
Scn3aA2ASI5 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.23□□□□□ -2.37
Scn3aA2ASI5 Gm16186-201ENSMUST00000120132 216 ntBASIC0.23□□□□□ -2.37
Scn3aA2ASI5 Gm13797-201ENSMUST00000121792 120 ntBASIC0.23□□□□□ -2.37
Scn3aA2ASI5 AC165157.3-201ENSMUST00000220815 103 ntBASIC0.23□□□□□ -2.37
Scn3aA2ASI5 mt-Ti-201ENSMUST00000082393 69 ntBASIC0.23□□□□□ -2.37
Scn3aA2ASI5 Gm23679-201ENSMUST00000083161 119 ntBASIC0.23□□□□□ -2.37
Scn3aA2ASI5 Mir384-201ENSMUST00000083565 88 ntBASIC0.23□□□□□ -2.37
Scn3aA2ASI5 Gm22753-201ENSMUST00000083657 107 ntBASIC0.23□□□□□ -2.37
Scn3aA2ASI5 Mir710-201ENSMUST00000102088 110 ntBASIC0.22□□□□□ -2.37
Scn3aA2ASI5 Gm24276-201ENSMUST00000102181 110 ntBASIC0.22□□□□□ -2.37
Scn3aA2ASI5 Mir881-201ENSMUST00000104844 78 ntBASIC0.22□□□□□ -2.37
Scn3aA2ASI5 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
Scn3aA2ASI5 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
Scn3aA2ASI5 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.22□□□□□ -2.37
Scn3aA2ASI5 Gm22815-201ENSMUST00000157451 62 ntBASIC0.22□□□□□ -2.37
Scn3aA2ASI5 Gm25424-201ENSMUST00000157612 58 ntBASIC0.22□□□□□ -2.37
Scn3aA2ASI5 Gm22612-201ENSMUST00000158293 101 ntBASIC0.22□□□□□ -2.37
Scn3aA2ASI5 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.22□□□□□ -2.37
Scn3aA2ASI5 Mir6365-201ENSMUST00000183990 101 ntBASIC0.22□□□□□ -2.37
Scn3aA2ASI5 Gm37330-201ENSMUST00000192606 153 ntBASIC0.22□□□□□ -2.37
Scn3aA2ASI5 Gm22738-201ENSMUST00000083440 147 ntBASIC0.22□□□□□ -2.37
Scn3aA2ASI5 Mir489-201ENSMUST00000093599 107 ntBASIC0.22□□□□□ -2.37
Scn3aA2ASI5 Mir532-201ENSMUST00000093630 96 ntBASIC0.22□□□□□ -2.37
Scn3aA2ASI5 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
Scn3aA2ASI5 Mir466f-2-201ENSMUST00000104805 94 ntBASIC0.21□□□□□ -2.38
Scn3aA2ASI5 Gm26482-201ENSMUST00000158015 62 ntBASIC0.21□□□□□ -2.38
Scn3aA2ASI5 Gm25444-201ENSMUST00000158999 113 ntBASIC0.21□□□□□ -2.38
Scn3aA2ASI5 Gm24321-201ENSMUST00000175348 80 ntBASIC0.21□□□□□ -2.38
Scn3aA2ASI5 Gm25247-201ENSMUST00000175475 90 ntBASIC0.21□□□□□ -2.38
Scn3aA2ASI5 Gm25749-201ENSMUST00000175485 111 ntBASIC0.21□□□□□ -2.38
Scn3aA2ASI5 Gm45859-201ENSMUST00000212794 214 ntBASIC0.21□□□□□ -2.38
Scn3aA2ASI5 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.21□□□□□ -2.38
Scn3aA2ASI5 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.21□□□□□ -2.38
Scn3aA2ASI5 Gm22368-201ENSMUST00000102416 109 ntBASIC0.21□□□□□ -2.38
Scn3aA2ASI5 Gm28020-201ENSMUST00000157739 67 ntBASIC0.21□□□□□ -2.38
Scn3aA2ASI5 Gm26160-201ENSMUST00000158965 63 ntBASIC0.21□□□□□ -2.38
Scn3aA2ASI5 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.21□□□□□ -2.38
Scn3aA2ASI5 Gm13345-201ENSMUST00000121928 228 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 165.5 ms