Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 AC154552.1-201ENSMUST00000222969 202 ntBASIC-0.16□□□□□ -2.44
Trav11A0A0B4J1J9 Gm26293-201ENSMUST00000104170 84 ntBASIC-0.17□□□□□ -2.44
Trav11A0A0B4J1J9 Gm24555-201ENSMUST00000104548 124 ntBASIC-0.17□□□□□ -2.44
Trav11A0A0B4J1J9 Gm23219-201ENSMUST00000158123 87 ntBASIC-0.17□□□□□ -2.44
Trav11A0A0B4J1J9 Gm24772-201ENSMUST00000158507 110 ntBASIC-0.17□□□□□ -2.44
Trav11A0A0B4J1J9 Gm22431-201ENSMUST00000158545 107 ntBASIC-0.17□□□□□ -2.44
Trav11A0A0B4J1J9 Gm26158-201ENSMUST00000158973 119 ntBASIC-0.17□□□□□ -2.44
Trav11A0A0B4J1J9 Gm24488-201ENSMUST00000179934 127 ntBASIC-0.17□□□□□ -2.44
Trav11A0A0B4J1J9 Gm25701-201ENSMUST00000179988 127 ntBASIC-0.17□□□□□ -2.44
Trav11A0A0B4J1J9 Gm23186-201ENSMUST00000180078 107 ntBASIC-0.17□□□□□ -2.44
Trav11A0A0B4J1J9 Gm26431-201ENSMUST00000180199 127 ntBASIC-0.17□□□□□ -2.44
Trav11A0A0B4J1J9 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.17□□□□□ -2.44
Trav11A0A0B4J1J9 Gm29140-201ENSMUST00000190187 476 ntBASIC-0.17□□□□□ -2.44
Trav11A0A0B4J1J9 Mir219b-201ENSMUST00000198317 65 ntBASIC-0.17□□□□□ -2.44
Trav11A0A0B4J1J9 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.17□□□□□ -2.44
Trav11A0A0B4J1J9 Gm24423-201ENSMUST00000101982 106 ntBASIC-0.18□□□□□ -2.44
Trav11A0A0B4J1J9 Gm23531-201ENSMUST00000104567 68 ntBASIC-0.18□□□□□ -2.44
Trav11A0A0B4J1J9 Gm15030-201ENSMUST00000119804 484 ntBASIC-0.18□□□□□ -2.44
Trav11A0A0B4J1J9 Gm38364-201ENSMUST00000191814 179 ntBASIC-0.18□□□□□ -2.44
Trav11A0A0B4J1J9 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.18□□□□□ -2.44
Trav11A0A0B4J1J9 Mir6896-201ENSMUST00000198033 73 ntBASIC-0.18□□□□□ -2.44
Trav11A0A0B4J1J9 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC-0.18□□□□□ -2.44
Trav11A0A0B4J1J9 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.18□□□□□ -2.44
Trav11A0A0B4J1J9 Gm26447-201ENSMUST00000082448 129 ntBASIC-0.18□□□□□ -2.44
Trav11A0A0B4J1J9 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.18□□□□□ -2.44
Trav11A0A0B4J1J9 Gm10222-201ENSMUST00000088336 294 ntBASIC-0.18□□□□□ -2.44
Trav11A0A0B4J1J9 Scarna9-201ENSMUST00000104318 70 ntBASIC-0.19□□□□□ -2.44
Trav11A0A0B4J1J9 Gm14567-201ENSMUST00000117155 174 ntBASIC-0.19□□□□□ -2.44
Trav11A0A0B4J1J9 Gm11204-201ENSMUST00000122438 147 ntBASIC-0.19□□□□□ -2.44
Trav11A0A0B4J1J9 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.19□□□□□ -2.44
Trav11A0A0B4J1J9 Gm25235-201ENSMUST00000179933 107 ntBASIC-0.19□□□□□ -2.44
Trav11A0A0B4J1J9 Gm28211-201ENSMUST00000190920 315 ntBASIC-0.19□□□□□ -2.44
Trav11A0A0B4J1J9 CT030645.1-201ENSMUST00000224020 231 ntBASIC-0.19□□□□□ -2.44
Trav11A0A0B4J1J9 Gm23406-201ENSMUST00000082537 122 ntBASIC-0.19□□□□□ -2.44
Trav11A0A0B4J1J9 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.19□□□□□ -2.44
Trav11A0A0B4J1J9 Snord60-201ENSMUST00000082834 78 ntBASIC-0.19□□□□□ -2.44
Trav11A0A0B4J1J9 Snord85-201ENSMUST00000083262 73 ntBASIC-0.19□□□□□ -2.44
Trav11A0A0B4J1J9 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.19□□□□□ -2.44
Trav11A0A0B4J1J9 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.2□□□□□ -2.44
Trav11A0A0B4J1J9 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.2□□□□□ -2.44
Trav11A0A0B4J1J9 Gm24006-201ENSMUST00000158462 132 ntBASIC-0.2□□□□□ -2.44
Trav11A0A0B4J1J9 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.2□□□□□ -2.44
Trav11A0A0B4J1J9 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.2□□□□□ -2.44
Trav11A0A0B4J1J9 Gm19790-201ENSMUST00000214414 251 ntBASIC-0.2□□□□□ -2.44
Trav11A0A0B4J1J9 AC192333.1-201ENSMUST00000224573 376 ntBASIC-0.2□□□□□ -2.44
Trav11A0A0B4J1J9 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.2□□□□□ -2.44
Trav11A0A0B4J1J9 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-0.21□□□□□ -2.44
Trav11A0A0B4J1J9 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.21□□□□□ -2.44
Trav11A0A0B4J1J9 Gm14301-201ENSMUST00000120181 324 ntBASIC-0.21□□□□□ -2.44
Trav11A0A0B4J1J9 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC-0.21□□□□□ -2.44
Trav11A0A0B4J1J9 Mir3089-201ENSMUST00000175350 84 ntBASIC-0.21□□□□□ -2.44
Trav11A0A0B4J1J9 Mir7079-201ENSMUST00000184697 69 ntBASIC-0.21□□□□□ -2.44
Trav11A0A0B4J1J9 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.21□□□□□ -2.44
Trav11A0A0B4J1J9 Gm6003-201ENSMUST00000187903 463 ntBASIC-0.21□□□□□ -2.44
Trav11A0A0B4J1J9 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.21□□□□□ -2.44
Trav11A0A0B4J1J9 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.21□□□□□ -2.44
Trav11A0A0B4J1J9 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.21□□□□□ -2.44
Trav11A0A0B4J1J9 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.21□□□□□ -2.44
Trav11A0A0B4J1J9 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
Trav11A0A0B4J1J9 CT010505.1-201ENSMUST00000227026 396 ntBASIC-0.21□□□□□ -2.44
Trav11A0A0B4J1J9 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.21□□□□□ -2.44
Trav11A0A0B4J1J9 Snord100-201ENSMUST00000116836 74 ntBASIC-0.22□□□□□ -2.44
Trav11A0A0B4J1J9 Gm23881-201ENSMUST00000116872 66 ntBASIC-0.22□□□□□ -2.44
Trav11A0A0B4J1J9 Gm12924-201ENSMUST00000121747 318 ntBASIC-0.22□□□□□ -2.44
Trav11A0A0B4J1J9 Gm25935-201ENSMUST00000178746 107 ntBASIC-0.22□□□□□ -2.44
Trav11A0A0B4J1J9 Gm28008-201ENSMUST00000184021 186 ntBASIC-0.22□□□□□ -2.44
Trav11A0A0B4J1J9 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC-0.22□□□□□ -2.44
Trav11A0A0B4J1J9 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.22□□□□□ -2.44
Trav11A0A0B4J1J9 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.22□□□□□ -2.44
Trav11A0A0B4J1J9 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.22□□□□□ -2.44
Trav11A0A0B4J1J9 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.22□□□□□ -2.44
Trav11A0A0B4J1J9 Gm45313-201ENSMUST00000210584 178 ntBASIC-0.22□□□□□ -2.44
Trav11A0A0B4J1J9 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC-0.22□□□□□ -2.44
Trav11A0A0B4J1J9 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-0.22□□□□□ -2.44
Trav11A0A0B4J1J9 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.22□□□□□ -2.44
Trav11A0A0B4J1J9 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.22□□□□□ -2.44
Trav11A0A0B4J1J9 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.22□□□□□ -2.44
Trav11A0A0B4J1J9 Mir181b-2-201ENSMUST00000083644 89 ntBASIC-0.22□□□□□ -2.44
Trav11A0A0B4J1J9 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC-0.22□□□□□ -2.45
Trav11A0A0B4J1J9 Gm24867-201ENSMUST00000104161 107 ntBASIC-0.23□□□□□ -2.45
Trav11A0A0B4J1J9 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.23□□□□□ -2.45
Trav11A0A0B4J1J9 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.23□□□□□ -2.45
Trav11A0A0B4J1J9 Mir6369-201ENSMUST00000183772 106 ntBASIC-0.23□□□□□ -2.45
Trav11A0A0B4J1J9 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.23□□□□□ -2.45
Trav11A0A0B4J1J9 Mir18-201ENSMUST00000083469 96 ntBASIC-0.23□□□□□ -2.45
Trav11A0A0B4J1J9 Gm24250-201ENSMUST00000157320 135 ntBASIC-0.24□□□□□ -2.45
Trav11A0A0B4J1J9 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.24□□□□□ -2.45
Trav11A0A0B4J1J9 Gm25375-201ENSMUST00000158157 135 ntBASIC-0.24□□□□□ -2.45
Trav11A0A0B4J1J9 Gm22088-201ENSMUST00000158341 117 ntBASIC-0.24□□□□□ -2.45
Trav11A0A0B4J1J9 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.24□□□□□ -2.45
Trav11A0A0B4J1J9 Gm25267-201ENSMUST00000158522 63 ntBASIC-0.24□□□□□ -2.45
Trav11A0A0B4J1J9 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.24□□□□□ -2.45
Trav11A0A0B4J1J9 Mir30f-201ENSMUST00000196073 92 ntBASIC-0.24□□□□□ -2.45
Trav11A0A0B4J1J9 Gm44308-201ENSMUST00000197080 99 ntBASIC-0.24□□□□□ -2.45
Trav11A0A0B4J1J9 Gm22571-201ENSMUST00000082984 70 ntBASIC-0.24□□□□□ -2.45
Trav11A0A0B4J1J9 Mir218-1-201ENSMUST00000083669 110 ntBASIC-0.24□□□□□ -2.45
Trav11A0A0B4J1J9 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC-0.24□□□□□ -2.45
Trav11A0A0B4J1J9 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.25□□□□□ -2.45
Trav11A0A0B4J1J9 Gm15654-201ENSMUST00000152660 300 ntBASIC-0.25□□□□□ -2.45
Trav11A0A0B4J1J9 Gm23466-201ENSMUST00000157133 106 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms