Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.35□□□□□ -2.35
Ighv1-42A0A0A6YY38 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.35□□□□□ -2.35
Ighv1-42A0A0A6YY38 Gm24555-201ENSMUST00000104548 124 ntBASIC0.34□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm26026-201ENSMUST00000122726 123 ntBASIC0.34□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm25771-201ENSMUST00000158565 144 ntBASIC0.34□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm22887-201ENSMUST00000178586 107 ntBASIC0.34□□□□□ -2.36
Ighv1-42A0A0A6YY38 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.34□□□□□ -2.36
Ighv1-42A0A0A6YY38 Mir532-201ENSMUST00000093630 96 ntBASIC0.34□□□□□ -2.36
Ighv1-42A0A0A6YY38 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
Ighv1-42A0A0A6YY38 Mir1197-201ENSMUST00000117037 120 ntBASIC0.33□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm28020-201ENSMUST00000157739 67 ntBASIC0.33□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm24963-201ENSMUST00000157916 144 ntBASIC0.33□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.33□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm26116-201ENSMUST00000175600 77 ntBASIC0.33□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm24929-201ENSMUST00000083403 139 ntBASIC0.33□□□□□ -2.36
Ighv1-42A0A0A6YY38 Snord69-201ENSMUST00000104024 80 ntBASIC0.32□□□□□ -2.36
Ighv1-42A0A0A6YY38 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.32□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm25393-201ENSMUST00000157336 285 ntBASIC0.32□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm25464-201ENSMUST00000175481 107 ntBASIC0.32□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm25814-201ENSMUST00000082754 107 ntBASIC0.32□□□□□ -2.36
Ighv1-42A0A0A6YY38 Mir384-201ENSMUST00000083565 88 ntBASIC0.32□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.31□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm26303-201ENSMUST00000116845 119 ntBASIC0.31□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm15289-201ENSMUST00000117793 244 ntBASIC0.31□□□□□ -2.36
Ighv1-42A0A0A6YY38 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.31□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm22790-201ENSMUST00000157229 129 ntBASIC0.31□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm25015-201ENSMUST00000158400 128 ntBASIC0.31□□□□□ -2.36
Ighv1-42A0A0A6YY38 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.31□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm23969-201ENSMUST00000083324 74 ntBASIC0.31□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.31□□□□□ -2.36
Ighv1-42A0A0A6YY38 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm23841-201ENSMUST00000116951 114 ntBASIC0.3□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm12686-201ENSMUST00000120546 397 ntBASIC0.3□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm12815-201ENSMUST00000121737 135 ntBASIC0.3□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm24509-201ENSMUST00000157086 101 ntBASIC0.3□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm25358-201ENSMUST00000157189 101 ntBASIC0.3□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm24772-201ENSMUST00000158507 110 ntBASIC0.3□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm24549-201ENSMUST00000158647 139 ntBASIC0.3□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm22466-201ENSMUST00000175278 69 ntBASIC0.3□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm25935-201ENSMUST00000178746 107 ntBASIC0.3□□□□□ -2.36
Ighv1-42A0A0A6YY38 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.3□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
Ighv1-42A0A0A6YY38 mt-Ti-201ENSMUST00000082393 69 ntBASIC0.3□□□□□ -2.36
Ighv1-42A0A0A6YY38 Mir224-201ENSMUST00000083608 82 ntBASIC0.3□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm22706-201ENSMUST00000157907 112 ntBASIC0.29□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm22358-201ENSMUST00000082877 122 ntBASIC0.29□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm26123-201ENSMUST00000083363 135 ntBASIC0.29□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm25188-201ENSMUST00000083913 122 ntBASIC0.29□□□□□ -2.36
Ighv1-42A0A0A6YY38 Snord19-201ENSMUST00000104609 76 ntBASIC0.28□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm24594-201ENSMUST00000122502 99 ntBASIC0.28□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm22145-201ENSMUST00000157396 148 ntBASIC0.28□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm25161-201ENSMUST00000158913 132 ntBASIC0.28□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm23047-201ENSMUST00000177661 94 ntBASIC0.28□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm27672-201ENSMUST00000183751 204 ntBASIC0.28□□□□□ -2.36
Ighv1-42A0A0A6YY38 Mir7077-201ENSMUST00000183991 57 ntBASIC0.28□□□□□ -2.36
Ighv1-42A0A0A6YY38 Mir6390-201ENSMUST00000184405 129 ntBASIC0.28□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm37889-201ENSMUST00000194174 251 ntBASIC0.28□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm43944-201ENSMUST00000205220 120 ntBASIC0.28□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm24208-201ENSMUST00000082783 135 ntBASIC0.28□□□□□ -2.36
Ighv1-42A0A0A6YY38 Gm25895-201ENSMUST00000083714 100 ntBASIC0.28□□□□□ -2.36
Ighv1-42A0A0A6YY38 Mir541-201ENSMUST00000102097 90 ntBASIC0.27□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm22999-201ENSMUST00000157082 88 ntBASIC0.27□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm22340-201ENSMUST00000157717 114 ntBASIC0.27□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm23838-201ENSMUST00000158067 162 ntBASIC0.27□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm25494-201ENSMUST00000158143 100 ntBASIC0.27□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm22983-201ENSMUST00000158308 104 ntBASIC0.27□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm25362-201ENSMUST00000158854 105 ntBASIC0.27□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm27476-201ENSMUST00000183366 104 ntBASIC0.27□□□□□ -2.37
Ighv1-42A0A0A6YY38 Mir710-201ENSMUST00000102088 110 ntBASIC0.26□□□□□ -2.37
Ighv1-42A0A0A6YY38 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm25509-201ENSMUST00000116985 106 ntBASIC0.26□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm23989-201ENSMUST00000117030 66 ntBASIC0.26□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm6897-201ENSMUST00000117714 138 ntBASIC0.26□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm14758-201ENSMUST00000119104 138 ntBASIC0.26□□□□□ -2.37
Ighv1-42A0A0A6YY38 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC0.26□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm13345-201ENSMUST00000121928 228 ntBASIC0.26□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm26152-201ENSMUST00000157427 101 ntBASIC0.26□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm24476-201ENSMUST00000157437 131 ntBASIC0.26□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm24728-201ENSMUST00000158226 125 ntBASIC0.26□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm26160-201ENSMUST00000158965 63 ntBASIC0.26□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm25300-201ENSMUST00000175284 84 ntBASIC0.26□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm25247-201ENSMUST00000175475 90 ntBASIC0.26□□□□□ -2.37
Ighv1-42A0A0A6YY38 Mir6369-201ENSMUST00000183772 106 ntBASIC0.26□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm19790-201ENSMUST00000214414 251 ntBASIC0.26□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm25611-201ENSMUST00000104017 133 ntBASIC0.25□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm24867-201ENSMUST00000104161 107 ntBASIC0.25□□□□□ -2.37
Ighv1-42A0A0A6YY38 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC0.25□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm42795-201ENSMUST00000198847 76 ntBASIC0.25□□□□□ -2.37
Ighv1-42A0A0A6YY38 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
Ighv1-42A0A0A6YY38 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.25□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm45541-201ENSMUST00000210443 54 ntBASIC0.25□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm19572-201ENSMUST00000214326 338 ntBASIC0.25□□□□□ -2.37
Ighv1-42A0A0A6YY38 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.25□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm24030-201ENSMUST00000083931 164 ntBASIC0.25□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.24□□□□□ -2.37
Ighv1-42A0A0A6YY38 Gm24121-201ENSMUST00000102029 106 ntBASIC0.24□□□□□ -2.37
Ighv1-42A0A0A6YY38 Mir466p-201ENSMUST00000103925 89 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 132.5 ms