Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Gm22767-201ENSMUST00000158365 165 ntBASIC-1.28□□□□□ -2.61
Trav3-4A0A075B654 Gm23016-201ENSMUST00000158431 62 ntBASIC-1.28□□□□□ -2.61
Trav3-4A0A075B654 Mir376a-201ENSMUST00000197584 68 ntBASIC-1.28□□□□□ -2.61
Trav3-4A0A075B654 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC-1.28□□□□□ -2.61
Trav3-4A0A075B654 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-1.28□□□□□ -2.61
Trav3-4A0A075B654 Gm25586-201ENSMUST00000082499 112 ntBASIC-1.28□□□□□ -2.61
Trav3-4A0A075B654 Gm25081-201ENSMUST00000082534 108 ntBASIC-1.28□□□□□ -2.61
Trav3-4A0A075B654 Gm23571-201ENSMUST00000180073 127 ntBASIC-1.29□□□□□ -2.62
Trav3-4A0A075B654 Gm27639-201ENSMUST00000184937 85 ntBASIC-1.29□□□□□ -2.62
Trav3-4A0A075B654 Gm44395-201ENSMUST00000197056 153 ntBASIC-1.29□□□□□ -2.62
Trav3-4A0A075B654 Gm44807-201ENSMUST00000206115 154 ntBASIC-1.29□□□□□ -2.62
Trav3-4A0A075B654 Gm14775-201ENSMUST00000122089 310 ntBASIC-1.3□□□□□ -2.62
Trav3-4A0A075B654 Gm25909-201ENSMUST00000157619 121 ntBASIC-1.3□□□□□ -2.62
Trav3-4A0A075B654 Gm16550-201ENSMUST00000162550 126 ntBASIC-1.3□□□□□ -2.62
Trav3-4A0A075B654 Gm9227-201ENSMUST00000194733 566 ntBASIC-1.3□□□□□ -2.62
Trav3-4A0A075B654 Mir465d-201ENSMUST00000196314 58 ntBASIC-1.3□□□□□ -2.62
Trav3-4A0A075B654 Gm26379-202ENSMUST00000200225 132 ntBASIC-1.3□□□□□ -2.62
Trav3-4A0A075B654 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC-1.31□□□□□ -2.62
Trav3-4A0A075B654 Gm23466-201ENSMUST00000157133 106 ntBASIC-1.31□□□□□ -2.62
Trav3-4A0A075B654 Gm27410-201ENSMUST00000183851 115 ntBASIC-1.31□□□□□ -2.62
Trav3-4A0A075B654 Gm37624-201ENSMUST00000193751 219 ntBASIC-1.31□□□□□ -2.62
Trav3-4A0A075B654 Mir30f-201ENSMUST00000196073 92 ntBASIC-1.31□□□□□ -2.62
Trav3-4A0A075B654 AC167192.2-201ENSMUST00000224794 198 ntBASIC-1.31□□□□□ -2.62
Trav3-4A0A075B654 Gm24276-201ENSMUST00000102181 110 ntBASIC-1.32□□□□□ -2.62
Trav3-4A0A075B654 Gm25610-201ENSMUST00000104016 129 ntBASIC-1.32□□□□□ -2.62
Trav3-4A0A075B654 Gm12584-201ENSMUST00000117109 1105 ntBASIC-1.32□□□□□ -2.62
Trav3-4A0A075B654 Gm14919-201ENSMUST00000120839 390 ntBASIC-1.32□□□□□ -2.62
Trav3-4A0A075B654 Gm25015-201ENSMUST00000158400 128 ntBASIC-1.32□□□□□ -2.62
Trav3-4A0A075B654 Gm23831-201ENSMUST00000158895 85 ntBASIC-1.32□□□□□ -2.62
Trav3-4A0A075B654 Gm23770-201ENSMUST00000178009 108 ntBASIC-1.32□□□□□ -2.62
Trav3-4A0A075B654 Gm22832-201ENSMUST00000178022 108 ntBASIC-1.32□□□□□ -2.62
Trav3-4A0A075B654 Gm23863-201ENSMUST00000178265 108 ntBASIC-1.32□□□□□ -2.62
Trav3-4A0A075B654 Gm24828-201ENSMUST00000178507 108 ntBASIC-1.32□□□□□ -2.62
Trav3-4A0A075B654 Gm23052-201ENSMUST00000178633 108 ntBASIC-1.32□□□□□ -2.62
Trav3-4A0A075B654 Gm25729-201ENSMUST00000179050 108 ntBASIC-1.32□□□□□ -2.62
Trav3-4A0A075B654 Gm25359-201ENSMUST00000179315 108 ntBASIC-1.32□□□□□ -2.62
Trav3-4A0A075B654 Gm22624-201ENSMUST00000179913 108 ntBASIC-1.32□□□□□ -2.62
Trav3-4A0A075B654 Gm25137-201ENSMUST00000083251 110 ntBASIC-1.32□□□□□ -2.62
Trav3-4A0A075B654 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC-1.32□□□□□ -2.62
Trav3-4A0A075B654 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-1.33□□□□□ -2.62
Trav3-4A0A075B654 Gm24761-201ENSMUST00000179589 127 ntBASIC-1.33□□□□□ -2.62
Trav3-4A0A075B654 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-1.33□□□□□ -2.62
Trav3-4A0A075B654 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-1.33□□□□□ -2.62
Trav3-4A0A075B654 Gm26107-201ENSMUST00000083972 107 ntBASIC-1.33□□□□□ -2.62
Trav3-4A0A075B654 Gm26329-201ENSMUST00000093723 110 ntBASIC-1.33□□□□□ -2.62
Trav3-4A0A075B654 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-1.33□□□□□ -2.62
Trav3-4A0A075B654 Gm25510-201ENSMUST00000116986 123 ntBASIC-1.34□□□□□ -2.62
Trav3-4A0A075B654 Gm25600-201ENSMUST00000158357 106 ntBASIC-1.34□□□□□ -2.62
Trav3-4A0A075B654 Gm27610-201ENSMUST00000184026 74 ntBASIC-1.34□□□□□ -2.62
Trav3-4A0A075B654 Gm42623-201ENSMUST00000197225 379 ntBASIC-1.34□□□□□ -2.62
Trav3-4A0A075B654 Mir582-201ENSMUST00000103758 81 ntBASIC-1.35□□□□□ -2.63
Trav3-4A0A075B654 Gm22771-201ENSMUST00000104449 91 ntBASIC-1.35□□□□□ -2.63
Trav3-4A0A075B654 Gm13801-201ENSMUST00000120750 160 ntBASIC-1.35□□□□□ -2.63
Trav3-4A0A075B654 Gm15654-201ENSMUST00000152660 300 ntBASIC-1.35□□□□□ -2.63
Trav3-4A0A075B654 Gm22157-201ENSMUST00000158410 104 ntBASIC-1.35□□□□□ -2.63
Trav3-4A0A075B654 Mir145b-201ENSMUST00000184434 75 ntBASIC-1.35□□□□□ -2.63
Trav3-4A0A075B654 Gm28917-201ENSMUST00000187294 237 ntBASIC-1.35□□□□□ -2.63
Trav3-4A0A075B654 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-1.35□□□□□ -2.63
Trav3-4A0A075B654 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-1.35□□□□□ -2.63
Trav3-4A0A075B654 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC-1.35□□□□□ -2.63
Trav3-4A0A075B654 AC167019.1-201ENSMUST00000227913 106 ntBASIC-1.35□□□□□ -2.63
Trav3-4A0A075B654 mt-Tc-201ENSMUST00000082400 66 ntBASIC-1.35□□□□□ -2.63
Trav3-4A0A075B654 Gm23448-201ENSMUST00000083151 104 ntBASIC-1.35□□□□□ -2.63
Trav3-4A0A075B654 Gm24250-201ENSMUST00000157320 135 ntBASIC-1.36□□□□□ -2.63
Trav3-4A0A075B654 Gm25450-201ENSMUST00000179144 107 ntBASIC-1.36□□□□□ -2.63
Trav3-4A0A075B654 Gm26180-201ENSMUST00000179942 107 ntBASIC-1.36□□□□□ -2.63
Trav3-4A0A075B654 Mir7043-201ENSMUST00000184219 70 ntBASIC-1.36□□□□□ -2.63
Trav3-4A0A075B654 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-1.36□□□□□ -2.63
Trav3-4A0A075B654 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.36□□□□□ -2.63
Trav3-4A0A075B654 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.36□□□□□ -2.63
Trav3-4A0A075B654 Gm44811-201ENSMUST00000209120 228 ntBASIC-1.36□□□□□ -2.63
Trav3-4A0A075B654 Gm45402-201ENSMUST00000211796 223 ntBASIC-1.36□□□□□ -2.63
Trav3-4A0A075B654 Gm11407-201ENSMUST00000120362 1058 ntBASIC-1.37□□□□□ -2.63
Trav3-4A0A075B654 Gm24635-201ENSMUST00000122712 128 ntBASIC-1.37□□□□□ -2.63
Trav3-4A0A075B654 Gm25314-201ENSMUST00000178810 79 ntBASIC-1.37□□□□□ -2.63
Trav3-4A0A075B654 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-1.37□□□□□ -2.63
Trav3-4A0A075B654 Snord67-201ENSMUST00000104033 111 ntBASIC-1.38□□□□□ -2.63
Trav3-4A0A075B654 Gm25497-201ENSMUST00000104425 132 ntBASIC-1.38□□□□□ -2.63
Trav3-4A0A075B654 Gm22553-201ENSMUST00000157797 295 ntBASIC-1.38□□□□□ -2.63
Trav3-4A0A075B654 Gm24129-201ENSMUST00000158537 97 ntBASIC-1.38□□□□□ -2.63
Trav3-4A0A075B654 Snora26-201ENSMUST00000175614 121 ntBASIC-1.38□□□□□ -2.63
Trav3-4A0A075B654 AC132437.1-201ENSMUST00000218308 320 ntBASIC-1.38□□□□□ -2.63
Trav3-4A0A075B654 Gm24453-201ENSMUST00000083346 76 ntBASIC-1.38□□□□□ -2.63
Trav3-4A0A075B654 Gm25579-201ENSMUST00000083407 106 ntBASIC-1.38□□□□□ -2.63
Trav3-4A0A075B654 Mir463-201ENSMUST00000093570 75 ntBASIC-1.38□□□□□ -2.63
Trav3-4A0A075B654 Gm22319-201ENSMUST00000157147 122 ntBASIC-1.39□□□□□ -2.63
Trav3-4A0A075B654 Gm22234-201ENSMUST00000174906 65 ntBASIC-1.39□□□□□ -2.63
Trav3-4A0A075B654 AC116589.4-201ENSMUST00000222390 216 ntBASIC-1.39□□□□□ -2.63
Trav3-4A0A075B654 Snord42b-201ENSMUST00000083742 69 ntBASIC-1.39□□□□□ -2.63
Trav3-4A0A075B654 Gm24445-201ENSMUST00000083981 107 ntBASIC-1.39□□□□□ -2.63
Trav3-4A0A075B654 Gm22105-201ENSMUST00000116734 116 ntBASIC-1.4□□□□□ -2.63
Trav3-4A0A075B654 Gm25771-201ENSMUST00000158565 144 ntBASIC-1.4□□□□□ -2.63
Trav3-4A0A075B654 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC-1.4□□□□□ -2.63
Trav3-4A0A075B654 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC-1.4□□□□□ -2.63
Trav3-4A0A075B654 Gm23660-201ENSMUST00000178362 79 ntBASIC-1.4□□□□□ -2.63
Trav3-4A0A075B654 Gm24088-201ENSMUST00000179100 79 ntBASIC-1.4□□□□□ -2.63
Trav3-4A0A075B654 Gm42795-201ENSMUST00000198847 76 ntBASIC-1.4□□□□□ -2.63
Trav3-4A0A075B654 AC102369.1-201ENSMUST00000218415 373 ntBASIC-1.4□□□□□ -2.63
Trav3-4A0A075B654 Gm26131-201ENSMUST00000082725 110 ntBASIC-1.4□□□□□ -2.63
Trav3-4A0A075B654 Gm23715-201ENSMUST00000157354 106 ntBASIC-1.41□□□□□ -2.64
Retrieved 100 of 76,532 protein–RNA pairs in 178.1 ms