Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Gm10172-201ENSMUST00000085929 558 ntBASIC0.11□□□□□ -2.39
Trav12-3A0A075B648 Gm25376-201ENSMUST00000104340 133 ntBASIC0.1□□□□□ -2.39
Trav12-3A0A075B648 n-R5s87-201ENSMUST00000122752 116 ntBASIC0.1□□□□□ -2.39
Trav12-3A0A075B648 Gm24250-201ENSMUST00000157320 135 ntBASIC0.1□□□□□ -2.39
Trav12-3A0A075B648 Gm28020-201ENSMUST00000157739 67 ntBASIC0.1□□□□□ -2.39
Trav12-3A0A075B648 Gm25364-201ENSMUST00000158851 107 ntBASIC0.1□□□□□ -2.39
Trav12-3A0A075B648 Gm23567-201ENSMUST00000178005 107 ntBASIC0.1□□□□□ -2.39
Trav12-3A0A075B648 Gm23770-201ENSMUST00000178009 108 ntBASIC0.1□□□□□ -2.39
Trav12-3A0A075B648 Gm22832-201ENSMUST00000178022 108 ntBASIC0.1□□□□□ -2.39
Trav12-3A0A075B648 Gm23863-201ENSMUST00000178265 108 ntBASIC0.1□□□□□ -2.39
Trav12-3A0A075B648 Gm24828-201ENSMUST00000178507 108 ntBASIC0.1□□□□□ -2.39
Trav12-3A0A075B648 Gm23052-201ENSMUST00000178633 108 ntBASIC0.1□□□□□ -2.39
Trav12-3A0A075B648 Gm25729-201ENSMUST00000179050 108 ntBASIC0.1□□□□□ -2.39
Trav12-3A0A075B648 Gm25359-201ENSMUST00000179315 108 ntBASIC0.1□□□□□ -2.39
Trav12-3A0A075B648 Gm22624-201ENSMUST00000179913 108 ntBASIC0.1□□□□□ -2.39
Trav12-3A0A075B648 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.1□□□□□ -2.39
Trav12-3A0A075B648 Gm8508-201ENSMUST00000061226 363 ntBASIC0.1□□□□□ -2.39
Trav12-3A0A075B648 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
Trav12-3A0A075B648 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
Trav12-3A0A075B648 Mir541-201ENSMUST00000102097 90 ntBASIC0.09□□□□□ -2.4
Trav12-3A0A075B648 Gm25485-201ENSMUST00000104120 132 ntBASIC0.09□□□□□ -2.4
Trav12-3A0A075B648 Gm23841-201ENSMUST00000116951 114 ntBASIC0.09□□□□□ -2.4
Trav12-3A0A075B648 Mir1899-201ENSMUST00000122798 96 ntBASIC0.09□□□□□ -2.4
Trav12-3A0A075B648 Gm25952-201ENSMUST00000175329 74 ntBASIC0.09□□□□□ -2.4
Trav12-3A0A075B648 Mir6369-201ENSMUST00000183772 106 ntBASIC0.09□□□□□ -2.4
Trav12-3A0A075B648 Gm42795-201ENSMUST00000198847 76 ntBASIC0.09□□□□□ -2.4
Trav12-3A0A075B648 AC165157.3-201ENSMUST00000220815 103 ntBASIC0.09□□□□□ -2.4
Trav12-3A0A075B648 mt-Ti-201ENSMUST00000082393 69 ntBASIC0.09□□□□□ -2.4
Trav12-3A0A075B648 Snord60-201ENSMUST00000082834 78 ntBASIC0.09□□□□□ -2.4
Trav12-3A0A075B648 Mir377-201ENSMUST00000083504 68 ntBASIC0.09□□□□□ -2.4
Trav12-3A0A075B648 Mir411-201ENSMUST00000083543 82 ntBASIC0.09□□□□□ -2.4
Trav12-3A0A075B648 Mir670-201ENSMUST00000102380 100 ntBASIC0.08□□□□□ -2.4
Trav12-3A0A075B648 Gm26420-201ENSMUST00000104273 103 ntBASIC0.08□□□□□ -2.4
Trav12-3A0A075B648 Scarna9-201ENSMUST00000104318 70 ntBASIC0.08□□□□□ -2.4
Trav12-3A0A075B648 Gm23760-201ENSMUST00000158350 116 ntBASIC0.08□□□□□ -2.4
Trav12-3A0A075B648 Gm25015-201ENSMUST00000158400 128 ntBASIC0.08□□□□□ -2.4
Trav12-3A0A075B648 Gm25901-201ENSMUST00000158494 130 ntBASIC0.08□□□□□ -2.4
Trav12-3A0A075B648 Gm16546-201ENSMUST00000159442 355 ntBASIC0.08□□□□□ -2.4
Trav12-3A0A075B648 Gm16550-201ENSMUST00000162550 126 ntBASIC0.08□□□□□ -2.4
Trav12-3A0A075B648 Mir6240-201ENSMUST00000184281 117 ntBASIC0.08□□□□□ -2.4
Trav12-3A0A075B648 Mir721-201ENSMUST00000200230 88 ntBASIC0.08□□□□□ -2.4
Trav12-3A0A075B648 Gm44989-201ENSMUST00000204749 217 ntBASIC0.08□□□□□ -2.4
Trav12-3A0A075B648 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
Trav12-3A0A075B648 Gm25588-201ENSMUST00000082501 140 ntBASIC0.08□□□□□ -2.4
Trav12-3A0A075B648 Snord19-201ENSMUST00000104609 76 ntBASIC0.07□□□□□ -2.4
Trav12-3A0A075B648 Gm6897-201ENSMUST00000117714 138 ntBASIC0.07□□□□□ -2.4
Trav12-3A0A075B648 Gm14758-201ENSMUST00000119104 138 ntBASIC0.07□□□□□ -2.4
Trav12-3A0A075B648 Gm22790-201ENSMUST00000157229 129 ntBASIC0.07□□□□□ -2.4
Trav12-3A0A075B648 Gm22664-201ENSMUST00000158719 105 ntBASIC0.07□□□□□ -2.4
Trav12-3A0A075B648 Gm27898-201ENSMUST00000183987 80 ntBASIC0.07□□□□□ -2.4
Trav12-3A0A075B648 Gm27943-201ENSMUST00000184844 116 ntBASIC0.07□□□□□ -2.4
Trav12-3A0A075B648 Gm44455-201ENSMUST00000200061 82 ntBASIC0.07□□□□□ -2.4
Trav12-3A0A075B648 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
Trav12-3A0A075B648 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.07□□□□□ -2.4
Trav12-3A0A075B648 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.07□□□□□ -2.4
Trav12-3A0A075B648 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC0.07□□□□□ -2.4
Trav12-3A0A075B648 Gm24121-201ENSMUST00000102029 106 ntBASIC0.06□□□□□ -2.4
Trav12-3A0A075B648 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
Trav12-3A0A075B648 Gm26279-201ENSMUST00000157095 102 ntBASIC0.06□□□□□ -2.4
Trav12-3A0A075B648 Gm10548-202ENSMUST00000165672 272 ntBASIC0.06□□□□□ -2.4
Trav12-3A0A075B648 Gm23917-201ENSMUST00000175256 98 ntBASIC0.06□□□□□ -2.4
Trav12-3A0A075B648 Gm43911-201ENSMUST00000203097 76 ntBASIC0.06□□□□□ -2.4
Trav12-3A0A075B648 AC192091.2-201ENSMUST00000217869 117 ntBASIC0.06□□□□□ -2.4
Trav12-3A0A075B648 Gm46993-201ENSMUST00000220708 259 ntBASIC0.06□□□□□ -2.4
Trav12-3A0A075B648 Gm22738-201ENSMUST00000083440 147 ntBASIC0.06□□□□□ -2.4
Trav12-3A0A075B648 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.06□□□□□ -2.4
Trav12-3A0A075B648 Gm24278-201ENSMUST00000104239 127 ntBASIC0.05□□□□□ -2.4
Trav12-3A0A075B648 Mir1193-201ENSMUST00000116761 121 ntBASIC0.05□□□□□ -2.4
Trav12-3A0A075B648 Gm23881-201ENSMUST00000116872 66 ntBASIC0.05□□□□□ -2.4
Trav12-3A0A075B648 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.05□□□□□ -2.4
Trav12-3A0A075B648 Gm15654-201ENSMUST00000152660 300 ntBASIC0.05□□□□□ -2.4
Trav12-3A0A075B648 Gm23821-201ENSMUST00000158738 106 ntBASIC0.05□□□□□ -2.4
Trav12-3A0A075B648 Gm26158-201ENSMUST00000158973 119 ntBASIC0.05□□□□□ -2.4
Trav12-3A0A075B648 Gm23967-201ENSMUST00000175062 78 ntBASIC0.05□□□□□ -2.4
Trav12-3A0A075B648 Gm27476-201ENSMUST00000183366 104 ntBASIC0.05□□□□□ -2.4
Trav12-3A0A075B648 Mir30f-201ENSMUST00000196073 92 ntBASIC0.05□□□□□ -2.4
Trav12-3A0A075B648 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.05□□□□□ -2.4
Trav12-3A0A075B648 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.05□□□□□ -2.4
Trav12-3A0A075B648 Gm25894-201ENSMUST00000083458 75 ntBASIC0.05□□□□□ -2.4
Trav12-3A0A075B648 Mir489-201ENSMUST00000093599 107 ntBASIC0.05□□□□□ -2.4
Trav12-3A0A075B648 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.04□□□□□ -2.4
Trav12-3A0A075B648 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.04□□□□□ -2.4
Trav12-3A0A075B648 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.04□□□□□ -2.4
Trav12-3A0A075B648 Gm22850-201ENSMUST00000157714 82 ntBASIC0.04□□□□□ -2.4
Trav12-3A0A075B648 Gm22557-201ENSMUST00000157804 102 ntBASIC0.04□□□□□ -2.4
Trav12-3A0A075B648 Gm22332-201ENSMUST00000158072 126 ntBASIC0.04□□□□□ -2.4
Trav12-3A0A075B648 Gm23047-201ENSMUST00000177661 94 ntBASIC0.04□□□□□ -2.4
Trav12-3A0A075B648 Mir8107-201ENSMUST00000184024 117 ntBASIC0.04□□□□□ -2.4
Trav12-3A0A075B648 Mir6917-201ENSMUST00000184111 61 ntBASIC0.04□□□□□ -2.4
Trav12-3A0A075B648 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.04□□□□□ -2.4
Trav12-3A0A075B648 Gm24258-201ENSMUST00000083739 133 ntBASIC0.04□□□□□ -2.4
Trav12-3A0A075B648 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
Trav12-3A0A075B648 Gm25938-201ENSMUST00000104139 166 ntBASIC0.03□□□□□ -2.4
Trav12-3A0A075B648 Gm22145-201ENSMUST00000157396 148 ntBASIC0.03□□□□□ -2.4
Trav12-3A0A075B648 Gm24729-201ENSMUST00000158225 137 ntBASIC0.03□□□□□ -2.4
Trav12-3A0A075B648 Gm24321-201ENSMUST00000175348 80 ntBASIC0.03□□□□□ -2.4
Trav12-3A0A075B648 Mir3105-201ENSMUST00000175480 85 ntBASIC0.03□□□□□ -2.4
Trav12-3A0A075B648 Gm24575-201ENSMUST00000175502 77 ntBASIC0.03□□□□□ -2.4
Trav12-3A0A075B648 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC0.03□□□□□ -2.4
Trav12-3A0A075B648 Gm28001-201ENSMUST00000183561 117 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 154.2 ms