Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm24570-201ENSMUST00000180314 79 ntBASIC1.6□□□□□ -2.15
H2afb3S4R1G7 Gm24654-201ENSMUST00000180315 79 ntBASIC1.6□□□□□ -2.15
H2afb3S4R1G7 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.6□□□□□ -2.15
H2afb3S4R1G7 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
H2afb3S4R1G7 Gm22003-201ENSMUST00000101885 107 ntBASIC1.59□□□□□ -2.15
H2afb3S4R1G7 Gm26076-201ENSMUST00000104065 105 ntBASIC1.59□□□□□ -2.15
H2afb3S4R1G7 Gm25376-201ENSMUST00000104340 133 ntBASIC1.59□□□□□ -2.15
H2afb3S4R1G7 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.59□□□□□ -2.15
H2afb3S4R1G7 Gm22666-201ENSMUST00000158717 164 ntBASIC1.59□□□□□ -2.15
H2afb3S4R1G7 Gm23963-201ENSMUST00000179603 77 ntBASIC1.59□□□□□ -2.15
H2afb3S4R1G7 Gm22756-201ENSMUST00000180118 107 ntBASIC1.59□□□□□ -2.15
H2afb3S4R1G7 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC1.59□□□□□ -2.15
H2afb3S4R1G7 Gm26054-201ENSMUST00000083037 107 ntBASIC1.59□□□□□ -2.15
H2afb3S4R1G7 Gm24492-201ENSMUST00000083798 107 ntBASIC1.59□□□□□ -2.15
H2afb3S4R1G7 Gm24030-201ENSMUST00000083931 164 ntBASIC1.59□□□□□ -2.15
H2afb3S4R1G7 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
H2afb3S4R1G7 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
H2afb3S4R1G7 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
H2afb3S4R1G7 Gm42770-201ENSMUST00000199657 4155 ntBASIC1.58□□□□□ -2.16
H2afb3S4R1G7 Snord64-201ENSMUST00000104003 67 ntBASIC1.58□□□□□ -2.16
H2afb3S4R1G7 Gm14946-201ENSMUST00000119859 296 ntBASIC1.58□□□□□ -2.16
H2afb3S4R1G7 Gm23172-201ENSMUST00000157160 124 ntBASIC1.58□□□□□ -2.16
H2afb3S4R1G7 Gm22332-201ENSMUST00000158072 126 ntBASIC1.58□□□□□ -2.16
H2afb3S4R1G7 Gm25769-201ENSMUST00000158569 127 ntBASIC1.58□□□□□ -2.16
H2afb3S4R1G7 Mir669j-201ENSMUST00000179023 121 ntBASIC1.58□□□□□ -2.16
H2afb3S4R1G7 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.58□□□□□ -2.16
H2afb3S4R1G7 Gm24805-201ENSMUST00000082931 104 ntBASIC1.58□□□□□ -2.16
H2afb3S4R1G7 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.58□□□□□ -2.16
H2afb3S4R1G7 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
H2afb3S4R1G7 Gm25938-201ENSMUST00000104139 166 ntBASIC1.57□□□□□ -2.16
H2afb3S4R1G7 Gm15289-201ENSMUST00000117793 244 ntBASIC1.57□□□□□ -2.16
H2afb3S4R1G7 Gm22558-201ENSMUST00000157326 95 ntBASIC1.57□□□□□ -2.16
H2afb3S4R1G7 Gm25367-201ENSMUST00000158846 106 ntBASIC1.57□□□□□ -2.16
H2afb3S4R1G7 Mir7683-201ENSMUST00000183842 61 ntBASIC1.57□□□□□ -2.16
H2afb3S4R1G7 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC1.57□□□□□ -2.16
H2afb3S4R1G7 AC147101.2-201ENSMUST00000219756 184 ntBASIC1.57□□□□□ -2.16
H2afb3S4R1G7 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
H2afb3S4R1G7 Gm26342-201ENSMUST00000104557 129 ntBASIC1.56□□□□□ -2.16
H2afb3S4R1G7 Mir880-201ENSMUST00000104809 78 ntBASIC1.56□□□□□ -2.16
H2afb3S4R1G7 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.56□□□□□ -2.16
H2afb3S4R1G7 Mir3092-201ENSMUST00000174954 96 ntBASIC1.56□□□□□ -2.16
H2afb3S4R1G7 Mir7241-201ENSMUST00000184532 64 ntBASIC1.56□□□□□ -2.16
H2afb3S4R1G7 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.56□□□□□ -2.16
H2afb3S4R1G7 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
H2afb3S4R1G7 Mir547-201ENSMUST00000102051 78 ntBASIC1.55□□□□□ -2.16
H2afb3S4R1G7 Gm26213-201ENSMUST00000158582 110 ntBASIC1.55□□□□□ -2.16
H2afb3S4R1G7 Gm22665-201ENSMUST00000158720 275 ntBASIC1.55□□□□□ -2.16
H2afb3S4R1G7 Gm24926-201ENSMUST00000178053 79 ntBASIC1.55□□□□□ -2.16
H2afb3S4R1G7 Gm22632-201ENSMUST00000178266 79 ntBASIC1.55□□□□□ -2.16
H2afb3S4R1G7 Gm25987-201ENSMUST00000083234 107 ntBASIC1.55□□□□□ -2.16
H2afb3S4R1G7 Mir451a-201ENSMUST00000093557 72 ntBASIC1.55□□□□□ -2.16
H2afb3S4R1G7 Gm12086-201ENSMUST00000120863 228 ntBASIC1.54□□□□□ -2.16
H2afb3S4R1G7 Gm26090-201ENSMUST00000157897 128 ntBASIC1.54□□□□□ -2.16
H2afb3S4R1G7 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.54□□□□□ -2.16
H2afb3S4R1G7 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.54□□□□□ -2.16
H2afb3S4R1G7 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.54□□□□□ -2.16
H2afb3S4R1G7 Gm24406-201ENSMUST00000083026 128 ntBASIC1.54□□□□□ -2.16
H2afb3S4R1G7 Gm22884-201ENSMUST00000083127 140 ntBASIC1.54□□□□□ -2.16
H2afb3S4R1G7 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.53□□□□□ -2.16
H2afb3S4R1G7 Gm25091-201ENSMUST00000103997 71 ntBASIC1.53□□□□□ -2.16
H2afb3S4R1G7 Gm22708-201ENSMUST00000158987 103 ntBASIC1.53□□□□□ -2.16
H2afb3S4R1G7 Gm25642-201ENSMUST00000175137 66 ntBASIC1.53□□□□□ -2.16
H2afb3S4R1G7 Gm8034-201ENSMUST00000178853 132 ntBASIC1.53□□□□□ -2.16
H2afb3S4R1G7 Gm27446-201ENSMUST00000183963 89 ntBASIC1.53□□□□□ -2.16
H2afb3S4R1G7 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC1.53□□□□□ -2.16
H2afb3S4R1G7 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.53□□□□□ -2.16
H2afb3S4R1G7 Gm25006-201ENSMUST00000083813 107 ntBASIC1.53□□□□□ -2.16
H2afb3S4R1G7 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
H2afb3S4R1G7 Gm14674-201ENSMUST00000117816 342 ntBASIC1.52□□□□□ -2.17
H2afb3S4R1G7 Gm13433-201ENSMUST00000121701 240 ntBASIC1.52□□□□□ -2.17
H2afb3S4R1G7 Gm23996-201ENSMUST00000158062 131 ntBASIC1.52□□□□□ -2.17
H2afb3S4R1G7 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.52□□□□□ -2.17
H2afb3S4R1G7 Gm22070-201ENSMUST00000178475 107 ntBASIC1.52□□□□□ -2.17
H2afb3S4R1G7 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.52□□□□□ -2.17
H2afb3S4R1G7 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
H2afb3S4R1G7 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.51□□□□□ -2.17
H2afb3S4R1G7 Gm23907-201ENSMUST00000104595 189 ntBASIC1.51□□□□□ -2.17
H2afb3S4R1G7 Gm12309-201ENSMUST00000119889 182 ntBASIC1.51□□□□□ -2.17
H2afb3S4R1G7 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.51□□□□□ -2.17
H2afb3S4R1G7 Trbv7-201ENSMUST00000193339 402 ntBASIC1.51□□□□□ -2.17
H2afb3S4R1G7 Mir378a-201ENSMUST00000198300 66 ntBASIC1.51□□□□□ -2.17
H2afb3S4R1G7 Gm42844-201ENSMUST00000200355 112 ntBASIC1.51□□□□□ -2.17
H2afb3S4R1G7 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.51□□□□□ -2.17
H2afb3S4R1G7 Gm16976-205ENSMUST00000227324 226 ntBASIC1.51□□□□□ -2.17
H2afb3S4R1G7 Gm23095-201ENSMUST00000083446 107 ntBASIC1.51□□□□□ -2.17
H2afb3S4R1G7 Mir322-201ENSMUST00000083484 95 ntBASIC1.51□□□□□ -2.17
H2afb3S4R1G7 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
H2afb3S4R1G7 Gm25730-201ENSMUST00000178753 165 ntBASIC1.5□□□□□ -2.17
H2afb3S4R1G7 Gm42795-201ENSMUST00000198847 76 ntBASIC1.5□□□□□ -2.17
H2afb3S4R1G7 Gm23299-201ENSMUST00000082708 79 ntBASIC1.5□□□□□ -2.17
H2afb3S4R1G7 Mir411-201ENSMUST00000083543 82 ntBASIC1.5□□□□□ -2.17
H2afb3S4R1G7 Snord7-201ENSMUST00000083781 97 ntBASIC1.5□□□□□ -2.17
H2afb3S4R1G7 Gm24523-201ENSMUST00000083965 132 ntBASIC1.5□□□□□ -2.17
H2afb3S4R1G7 Gm25279-201ENSMUST00000122608 133 ntBASIC1.49□□□□□ -2.17
H2afb3S4R1G7 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.49□□□□□ -2.17
H2afb3S4R1G7 Gm22264-201ENSMUST00000178200 107 ntBASIC1.49□□□□□ -2.17
H2afb3S4R1G7 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.49□□□□□ -2.17
H2afb3S4R1G7 Gm25992-201ENSMUST00000102437 109 ntBASIC1.48□□□□□ -2.17
H2afb3S4R1G7 Gm24229-201ENSMUST00000158830 118 ntBASIC1.48□□□□□ -2.17
H2afb3S4R1G7 Gm27265-201ENSMUST00000183559 77 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 172.4 ms